RNA–Protein interactions for RNA: ENST00000591636.5

ERCC1-212, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-212ENST00000591636 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
ERCC1-212ENST00000591636 ABCC9O60706 1549 aa37.34■■■■□ 3.57
ERCC1-212ENST00000591636 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
ERCC1-212ENST00000591636 RB1CC1Q8TDY2 1594 aa35.48■■■■□ 3.27
ERCC1-212ENST00000591636 DNAJC5BQ9UF47 199 aa35.16■■■■□ 3.22
ERCC1-212ENST00000591636 NACADO15069 1562 aa35.14■■■■□ 3.22
ERCC1-212ENST00000591636 DCAF8L2P0C7V8 631 aa34.79■■■■□ 3.16
ERCC1-212ENST00000591636 PABPN1Q86U42 306 aaKnown RBP eCLIP34.64■■■■□ 3.14
ERCC1-212ENST00000591636 UNC13AQ9UPW8 1703 aa34.63■■■■□ 3.13
ERCC1-212ENST00000591636 MYO15BQ96JP2 1530 aa34.54■■■■□ 3.12
ERCC1-212ENST00000591636 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
ERCC1-212ENST00000591636 ZCCHC6Q5VYS8 1495 aaKnown RBP34.02■■■■□ 3.04
ERCC1-212ENST00000591636 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.03
ERCC1-212ENST00000591636 DCAF1Q9Y4B6 1507 aa33.97■■■■□ 3.03
ERCC1-212ENST00000591636 SCRIBQ14160 1630 aa33.76■■■■□ 3
ERCC1-212ENST00000591636 CC2D2AQ9P2K1 1620 aa33.74■■■□□ 2.99
ERCC1-212ENST00000591636 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
ERCC1-212ENST00000591636 EIF4G1Q04637 1599 aaKnown RBP33.6■■■□□ 2.97
ERCC1-212ENST00000591636 DNAJC5Q9H3Z4 198 aa32.62■■■□□ 2.81
ERCC1-212ENST00000591636 CUX2O14529 1486 aa32.38■■■□□ 2.77
ERCC1-212ENST00000591636 NCAPD3P42695 1498 aa32.38■■■□□ 2.77
ERCC1-212ENST00000591636 ERCC6Q03468 1493 aa32.35■■■□□ 2.77
ERCC1-212ENST00000591636 ATAD2BQ9ULI0 1458 aa32.23■■■□□ 2.75
ERCC1-212ENST00000591636 SMARCA2P51531 1590 aa32.22■■■□□ 2.75
ERCC1-212ENST00000591636 HMGXB3Q12766 1538 aa32.19■■■□□ 2.74
ERCC1-212ENST00000591636 SMARCA4P51532 1647 aa32.17■■■□□ 2.74
ERCC1-212ENST00000591636 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
ERCC1-212ENST00000591636 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
ERCC1-212ENST00000591636 NESP48681 1621 aa31.95■■■□□ 2.71
ERCC1-212ENST00000591636 PEG3Q9GZU2 1588 aa31.85■■■□□ 2.69
ERCC1-212ENST00000591636 LAMC3Q9Y6N6 1575 aa31.77■■■□□ 2.68
ERCC1-212ENST00000591636 THOC2Q8NI27 1593 aaKnown RBP31.77■■■□□ 2.68
ERCC1-212ENST00000591636 MROH2BQ7Z745 1585 aa31.64■■■□□ 2.65
ERCC1-212ENST00000591636 KIF21AQ7Z4S6 1674 aa31.61■■■□□ 2.65
ERCC1-212ENST00000591636 PDS5BQ9NTI5 1447 aa31.59■■■□□ 2.65
ERCC1-212ENST00000591636 CADPSQ9ULU8 1353 aa31.38■■■□□ 2.61
ERCC1-212ENST00000591636 MRC2Q9UBG0 1479 aa31.34■■■□□ 2.61
ERCC1-212ENST00000591636 WIZO95785 1651 aa31.26■■■□□ 2.6
ERCC1-212ENST00000591636 WDR62O43379 1518 aa31.26■■■□□ 2.59
ERCC1-212ENST00000591636 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
ERCC1-212ENST00000591636 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
ERCC1-212ENST00000591636 FANCD2Q9BXW9 1451 aa31.06■■■□□ 2.56
ERCC1-212ENST00000591636 CFTRP13569 1480 aa30.96■■■□□ 2.55
ERCC1-212ENST00000591636 TOP2AP11388 1531 aaKnown RBP30.9■■■□□ 2.54
ERCC1-212ENST00000591636 RSF1Q96T23 1441 aaPredicted RBP30.86■■■□□ 2.53
ERCC1-212ENST00000591636 URB2Q14146 1524 aaKnown RBP30.8■■■□□ 2.52
ERCC1-212ENST00000591636 OSCARQ8IYS5 282 aa30.78■■■□□ 2.52
ERCC1-212ENST00000591636 PRDM2Q13029 1718 aa30.75■■■□□ 2.51
ERCC1-212ENST00000591636 IFT140Q96RY7 1462 aa30.54■■■□□ 2.48
ERCC1-212ENST00000591636 CCDC88BA6NC98 1476 aa30.48■■■□□ 2.47
ERCC1-212ENST00000591636 RIMBP3CA6NJZ7 1639 aa30.46■■■□□ 2.47
ERCC1-212ENST00000591636 RIMBP3BA6NNM3 1639 aa30.46■■■□□ 2.47
ERCC1-212ENST00000591636 RIMBP3Q9UFD9 1639 aa30.46■■■□□ 2.47
ERCC1-212ENST00000591636 ZNF608Q9ULD9 1512 aaPredicted RBP30.45■■■□□ 2.47
ERCC1-212ENST00000591636 TOPBP1Q92547 1522 aa30.42■■■□□ 2.46
ERCC1-212ENST00000591636 ABCC8Q09428 1581 aa30.4■■■□□ 2.46
ERCC1-212ENST00000591636 EIF4G3O43432 1585 aaKnown RBP30.36■■■□□ 2.45
ERCC1-212ENST00000591636 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
ERCC1-212ENST00000591636 ARHGEF11O15085 1522 aa30.32■■■□□ 2.44
ERCC1-212ENST00000591636 CHD1O14646 1710 aa30.19■■■□□ 2.42
ERCC1-212ENST00000591636 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
ERCC1-212ENST00000591636 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.412e-7■■■■■ 39
ERCC1-212ENST00000591636 POLA1P09884 1462 aaPredicted RBP30.09■■■□□ 2.41
ERCC1-212ENST00000591636 CYB5RLQ6IPT4 315 aa30.06■■■□□ 2.4
ERCC1-212ENST00000591636 FBLN2P98095 1184 aa30.03■■■□□ 2.4
ERCC1-212ENST00000591636 ARAP1Q96P48 1450 aa29.99■■■□□ 2.39
ERCC1-212ENST00000591636 WDR97A6NE52 1622 aa29.95■■■□□ 2.38
ERCC1-212ENST00000591636 RAD54L2Q9Y4B4 1467 aa29.94■■■□□ 2.38
ERCC1-212ENST00000591636 SOGA1O94964 1423 aa29.93■■■□□ 2.38
ERCC1-212ENST00000591636 TDRD9Q8NDG6 1382 aaKnown RBP29.9■■■□□ 2.38
ERCC1-212ENST00000591636 TRHP20396 242 aaPredicted RBP29.88■■■□□ 2.37
ERCC1-212ENST00000591636 SNAPC4Q5SXM2 1469 aa29.87■■■□□ 2.37
ERCC1-212ENST00000591636 FGD5Q6ZNL6 1462 aa29.87■■■□□ 2.37
ERCC1-212ENST00000591636 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
ERCC1-212ENST00000591636 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
ERCC1-212ENST00000591636 CLASP1Q7Z460 1538 aa29.81■■■□□ 2.36
ERCC1-212ENST00000591636 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
ERCC1-212ENST00000591636 CUX1P39880 1505 aa29.76■■■□□ 2.36
ERCC1-212ENST00000591636 GRIN2BQ13224 1484 aa29.76■■■□□ 2.35
ERCC1-212ENST00000591636 SYNJ2O15056 1496 aa29.7■■■□□ 2.35
ERCC1-212ENST00000591636 PBRM1Q86U86 1689 aa29.66■■■□□ 2.34
ERCC1-212ENST00000591636 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
ERCC1-212ENST00000591636 ABCA5Q8WWZ7 1642 aa29.52■■■□□ 2.32
ERCC1-212ENST00000591636 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.32
ERCC1-212ENST00000591636 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
ERCC1-212ENST00000591636 WRNQ14191 1432 aaPredicted RBP eCLIP29.35■■■□□ 2.29
ERCC1-212ENST00000591636 ADAMTS12P58397 1594 aa29.34■■■□□ 2.29
ERCC1-212ENST00000591636 AEBP2Q6ZN18 517 aaPredicted RBP29.3■■■□□ 2.28
ERCC1-212ENST00000591636 BIVM-ERCC5R4GMW8 1640 aa29.26■■■□□ 2.27
ERCC1-212ENST00000591636 NUP160Q12769 1436 aa29.26■■■□□ 2.27
ERCC1-212ENST00000591636 CEP170Q5SW79 1584 aa29.26■■■□□ 2.27
ERCC1-212ENST00000591636 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
ERCC1-212ENST00000591636 ERCC6L2Q5T890 1561 aa29.25■■■□□ 2.27
ERCC1-212ENST00000591636 TOP2BQ02880 1626 aa29.24■■■□□ 2.27
ERCC1-212ENST00000591636 FHAD1B1AJZ9 1412 aa29.21■■■□□ 2.27
ERCC1-212ENST00000591636 SHROOM2Q13796 1616 aa29.2■■■□□ 2.26
ERCC1-212ENST00000591636 ERICH3Q5RHP9 1530 aa29.17■■■□□ 2.26
ERCC1-212ENST00000591636 PRG4Q92954 1404 aaPredicted RBP29.01■■■□□ 2.23
ERCC1-212ENST00000591636 KIF13AQ9H1H9 1805 aa28.98■■■□□ 2.23
ERCC1-212ENST00000591636 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms