Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
CPNE3O75131 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CPNE3O75131 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CPNE3O75131 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE3O75131 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.53■□□□□ 0.08
CPNE3O75131 MTND6P24-201ENST00000440466 518 ntBASIC15.53■□□□□ 0.08
CPNE3O75131 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.53■□□□□ 0.08
CPNE3O75131 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE3O75131 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CPNE3O75131 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.53■□□□□ 0.08
CPNE3O75131 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE3O75131 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE3O75131 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE3O75131 LINC02560-201ENST00000596379 459 ntBASIC15.53■□□□□ 0.08
CPNE3O75131 AL590560.3-201ENST00000623350 461 ntBASIC15.53■□□□□ 0.08
CPNE3O75131 AC008761.3-201ENST00000624803 892 ntBASIC15.53■□□□□ 0.08
CPNE3O75131 GPAA1P2-202ENST00000606848 1787 ntBASIC15.53■□□□□ 0.08
CPNE3O75131 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CPNE3O75131 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CPNE3O75131 AC005915.1-201ENST00000624912 2018 ntBASIC15.53■□□□□ 0.08
CPNE3O75131 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CPNE3O75131 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
CPNE3O75131 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CPNE3O75131 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.52■□□□□ 0.08
CPNE3O75131 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.52■□□□□ 0.08
CPNE3O75131 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CPNE3O75131 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CPNE3O75131 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.52■□□□□ 0.08
CPNE3O75131 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.52■□□□□ 0.08
CPNE3O75131 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CPNE3O75131 AC093724.1-201ENST00000448659 1027 ntBASIC15.52■□□□□ 0.08
CPNE3O75131 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE3O75131 HLA-J-202ENST00000469281 1241 ntBASIC15.52■□□□□ 0.08
CPNE3O75131 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.52■□□□□ 0.08
CPNE3O75131 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.52■□□□□ 0.08
CPNE3O75131 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.52■□□□□ 0.08
CPNE3O75131 AC024267.1-201ENST00000582320 895 ntBASIC15.52■□□□□ 0.08
CPNE3O75131 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.52■□□□□ 0.08
CPNE3O75131 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CPNE3O75131 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.52■□□□□ 0.07
CPNE3O75131 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE3O75131 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CPNE3O75131 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.52■□□□□ 0.07
CPNE3O75131 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE3O75131 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE3O75131 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CPNE3O75131 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.52■□□□□ 0.07
CPNE3O75131 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE3O75131 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE3O75131 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.52■□□□□ 0.07
CPNE3O75131 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.52■□□□□ 0.07
CPNE3O75131 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.52■□□□□ 0.07
CPNE3O75131 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE3O75131 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE3O75131 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE3O75131 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.52■□□□□ 0.07
CPNE3O75131 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPNE3O75131 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE3O75131 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CPNE3O75131 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CPNE3O75131 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE3O75131 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms