Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TRIM3O75382 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.17■□□□□ 0.02
TRIM3O75382 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRIM3O75382 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM3O75382 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 MIR600HG-201ENST00000449175 5984 ntBASIC15.17■□□□□ 0.02
TRIM3O75382 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM3O75382 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TRIM3O75382 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRIM3O75382 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRIM3O75382 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
TRIM3O75382 AC016027.1-202ENST00000607927 1699 ntBASIC15.16■□□□□ 0.02
TRIM3O75382 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRIM3O75382 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM3O75382 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM3O75382 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM3O75382 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.16■□□□□ 0.02
TRIM3O75382 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM3O75382 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM3O75382 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM3O75382 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRIM3O75382 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 FAM45BP-202ENST00000592932 1624 ntBASIC15.16■□□□□ 0.02
TRIM3O75382 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM3O75382 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRIM3O75382 KRT18P28-201ENST00000453838 1332 ntBASIC15.16■□□□□ 0.02
TRIM3O75382 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM3O75382 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM3O75382 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRIM3O75382 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM3O75382 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM3O75382 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM3O75382 AL365203.3-201ENST00000609742 2057 ntBASIC15.15■□□□□ 0.02
TRIM3O75382 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRIM3O75382 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 AC126177.1-201ENST00000547829 2218 ntBASIC15.15■□□□□ 0.02
TRIM3O75382 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM3O75382 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM3O75382 SPCS2P4-201ENST00000436160 681 ntBASIC15.15■□□□□ 0.02
TRIM3O75382 AL592309.1-201ENST00000443127 649 ntBASIC15.15■□□□□ 0.02
TRIM3O75382 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM3O75382 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM3O75382 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM3O75382 AC093520.2-201ENST00000561830 333 ntBASIC15.15■□□□□ 0.02
TRIM3O75382 LINC01225-203ENST00000563550 1244 ntBASIC15.15■□□□□ 0.02
TRIM3O75382 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM3O75382 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
TRIM3O75382 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM3O75382 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM3O75382 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM3O75382 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRIM3O75382 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM3O75382 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms