RNA–Protein interactions for RNA: ENST00000436160.1

SPCS2P4-201, Transcript of signal peptidase complex subunit 2 pseudogene 4, humanhuman

BASIC

Gene SPCS2P4, Length 681 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2P4-201ENST00000436160 NISCHQ9Y2I1 1504 aa40.25■■■■■ 4.03
SPCS2P4-201ENST00000436160 CCDC180Q9P1Z9 1646 aa35.7■■■■□ 3.31
SPCS2P4-201ENST00000436160 ABCC9O60706 1549 aa35.1■■■■□ 3.21
SPCS2P4-201ENST00000436160 DCAF8L2P0C7V8 631 aa33.67■■■□□ 2.98
SPCS2P4-201ENST00000436160 RB1CC1Q8TDY2 1594 aa33.67■■■□□ 2.98
SPCS2P4-201ENST00000436160 NACADO15069 1562 aa33.62■■■□□ 2.97
SPCS2P4-201ENST00000436160 ZCCHC6Q5VYS8 1495 aaKnown RBP33.53■■■□□ 2.96
SPCS2P4-201ENST00000436160 MYO15BQ96JP2 1530 aa33.42■■■□□ 2.94
SPCS2P4-201ENST00000436160 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
SPCS2P4-201ENST00000436160 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.84
SPCS2P4-201ENST00000436160 UNC13AQ9UPW8 1703 aa32.81■■■□□ 2.84
SPCS2P4-201ENST00000436160 BICRAQ9NZM4 1560 aa32.7■■■□□ 2.82
SPCS2P4-201ENST00000436160 SCRIBQ14160 1630 aa32.66■■■□□ 2.82
SPCS2P4-201ENST00000436160 SHROOM4Q9ULL8 1493 aa32.3■■■□□ 2.76
SPCS2P4-201ENST00000436160 DNAJC5BQ9UF47 199 aa32.3■■■□□ 2.76
SPCS2P4-201ENST00000436160 EIF4G1Q04637 1599 aaKnown RBP31.82■■■□□ 2.68
SPCS2P4-201ENST00000436160 CC2D2AQ9P2K1 1620 aa31.69■■■□□ 2.66
SPCS2P4-201ENST00000436160 CECR2Q9BXF3 1484 aa31.52■■■□□ 2.64
SPCS2P4-201ENST00000436160 SMARCA4P51532 1647 aa31.2■■■□□ 2.59
SPCS2P4-201ENST00000436160 BAZ1AQ9NRL2 1556 aaPredicted RBP31.17■■■□□ 2.58
SPCS2P4-201ENST00000436160 ATAD2BQ9ULI0 1458 aa31.1■■■□□ 2.57
SPCS2P4-201ENST00000436160 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
SPCS2P4-201ENST00000436160 MROH2BQ7Z745 1585 aa31.04■■■□□ 2.56
SPCS2P4-201ENST00000436160 SMARCA2P51531 1590 aa31■■■□□ 2.55
SPCS2P4-201ENST00000436160 PEG3Q9GZU2 1588 aa30.91■■■□□ 2.54
SPCS2P4-201ENST00000436160 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
SPCS2P4-201ENST00000436160 BAZ1BQ9UIG0 1483 aaKnown RBP30.82■■■□□ 2.52
SPCS2P4-201ENST00000436160 RSF1Q96T23 1441 aaPredicted RBP30.68■■■□□ 2.5
SPCS2P4-201ENST00000436160 WIZO95785 1651 aa30.66■■■□□ 2.5
SPCS2P4-201ENST00000436160 NESP48681 1621 aa30.36■■■□□ 2.45
SPCS2P4-201ENST00000436160 TOP2AP11388 1531 aaKnown RBP30.35■■■□□ 2.45
SPCS2P4-201ENST00000436160 ERCC6Q03468 1493 aa30.22■■■□□ 2.43
SPCS2P4-201ENST00000436160 LAMC3Q9Y6N6 1575 aa30.21■■■□□ 2.43
SPCS2P4-201ENST00000436160 CADPSQ9ULU8 1353 aa30.17■■■□□ 2.42
SPCS2P4-201ENST00000436160 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
SPCS2P4-201ENST00000436160 CCDC88BA6NC98 1476 aa30.02■■■□□ 2.4
SPCS2P4-201ENST00000436160 CFTRP13569 1480 aa29.99■■■□□ 2.39
SPCS2P4-201ENST00000436160 CUX2O14529 1486 aa29.9■■■□□ 2.38
SPCS2P4-201ENST00000436160 KIF21AQ7Z4S6 1674 aa29.9■■■□□ 2.38
SPCS2P4-201ENST00000436160 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
SPCS2P4-201ENST00000436160 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
SPCS2P4-201ENST00000436160 FANCD2Q9BXW9 1451 aa29.82■■■□□ 2.36
SPCS2P4-201ENST00000436160 CEP164Q9UPV0 1460 aa29.77■■■□□ 2.36
SPCS2P4-201ENST00000436160 MRC2Q9UBG0 1479 aa29.74■■■□□ 2.35
SPCS2P4-201ENST00000436160 WDR62O43379 1518 aa29.64■■■□□ 2.34
SPCS2P4-201ENST00000436160 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
SPCS2P4-201ENST00000436160 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
SPCS2P4-201ENST00000436160 TOPBP1Q92547 1522 aa29.34■■■□□ 2.29
SPCS2P4-201ENST00000436160 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
SPCS2P4-201ENST00000436160 DNMBPQ6XZF7 1577 aa29.27■■■□□ 2.28
SPCS2P4-201ENST00000436160 IFT140Q96RY7 1462 aa29.16■■■□□ 2.26
SPCS2P4-201ENST00000436160 CUX1P39880 1505 aa29.11■■■□□ 2.25
SPCS2P4-201ENST00000436160 POLA1P09884 1462 aaPredicted RBP29.1■■■□□ 2.25
SPCS2P4-201ENST00000436160 DNAJC5Q9H3Z4 198 aa29.07■■■□□ 2.24
SPCS2P4-201ENST00000436160 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
SPCS2P4-201ENST00000436160 FGD5Q6ZNL6 1462 aa29.02■■■□□ 2.24
SPCS2P4-201ENST00000436160 TARBP1Q13395 1621 aaKnown RBP29■■■□□ 2.23
SPCS2P4-201ENST00000436160 RAD54L2Q9Y4B4 1467 aa28.99■■■□□ 2.23
SPCS2P4-201ENST00000436160 SOGA1O94964 1423 aa28.98■■■□□ 2.23
SPCS2P4-201ENST00000436160 WRNQ14191 1432 aaPredicted RBP eCLIP28.91■■■□□ 2.22
SPCS2P4-201ENST00000436160 EIF4G3O43432 1585 aaKnown RBP28.9■■■□□ 2.22
SPCS2P4-201ENST00000436160 AQRO60306 1485 aaKnown RBP eCLIP28.9■■■□□ 2.22
SPCS2P4-201ENST00000436160 TDRD9Q8NDG6 1382 aaKnown RBP28.85■■■□□ 2.21
SPCS2P4-201ENST00000436160 SYNJ1O43426 1573 aa28.84■■■□□ 2.21
SPCS2P4-201ENST00000436160 TOP2BQ02880 1626 aa28.81■■■□□ 2.2
SPCS2P4-201ENST00000436160 BIVM-ERCC5R4GMW8 1640 aa28.79■■■□□ 2.2
SPCS2P4-201ENST00000436160 ABCA10Q8WWZ4 1543 aa28.72■■■□□ 2.19
SPCS2P4-201ENST00000436160 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
SPCS2P4-201ENST00000436160 OSCARQ8IYS5 282 aa28.67■■■□□ 2.18
SPCS2P4-201ENST00000436160 GRIN2BQ13224 1484 aa28.63■■■□□ 2.17
SPCS2P4-201ENST00000436160 GAPVD1Q14C86 1478 aa28.62■■■□□ 2.17
SPCS2P4-201ENST00000436160 SNAPC4Q5SXM2 1469 aa28.61■■■□□ 2.17
SPCS2P4-201ENST00000436160 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
SPCS2P4-201ENST00000436160 FBLN2P98095 1184 aa28.54■■■□□ 2.16
SPCS2P4-201ENST00000436160 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
SPCS2P4-201ENST00000436160 PBRM1Q86U86 1689 aa28.48■■■□□ 2.15
SPCS2P4-201ENST00000436160 CHD1O14646 1710 aa28.47■■■□□ 2.15
SPCS2P4-201ENST00000436160 CHMP7Q8WUX9 453 aaPredicted RBP28.45■■■□□ 2.14
SPCS2P4-201ENST00000436160 SYNJ2O15056 1496 aa28.45■■■□□ 2.14
SPCS2P4-201ENST00000436160 ERICH3Q5RHP9 1530 aa28.36■■■□□ 2.13
SPCS2P4-201ENST00000436160 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
SPCS2P4-201ENST00000436160 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
SPCS2P4-201ENST00000436160 KIF27Q86VH2 1401 aa28.29■■■□□ 2.12
SPCS2P4-201ENST00000436160 GRIN2AQ12879 1464 aa28.27■■■□□ 2.12
SPCS2P4-201ENST00000436160 CLASP1Q7Z460 1538 aa28.25■■■□□ 2.11
SPCS2P4-201ENST00000436160 IGF1RP08069 1367 aa28.23■■■□□ 2.11
SPCS2P4-201ENST00000436160 ARHGEF11O15085 1522 aa28.22■■■□□ 2.11
SPCS2P4-201ENST00000436160 TRIM41Q8WV44 630 aa28.21■■■□□ 2.11
SPCS2P4-201ENST00000436160 RIMBP3CA6NJZ7 1639 aa28.19■■■□□ 2.1
SPCS2P4-201ENST00000436160 RIMBP3BA6NNM3 1639 aa28.19■■■□□ 2.1
SPCS2P4-201ENST00000436160 RIMBP3Q9UFD9 1639 aa28.19■■■□□ 2.1
SPCS2P4-201ENST00000436160 NUP160Q12769 1436 aa28.15■■■□□ 2.1
SPCS2P4-201ENST00000436160 CEP170Q5SW79 1584 aa28.12■■■□□ 2.09
SPCS2P4-201ENST00000436160 RUSC2Q8N2Y8 1516 aa28.08■■■□□ 2.09
SPCS2P4-201ENST00000436160 CUL7Q14999 1698 aa28.06■■■□□ 2.08
SPCS2P4-201ENST00000436160 CARMIL1Q5VZK9 1371 aa28.03■■■□□ 2.08
SPCS2P4-201ENST00000436160 ARAP1Q96P48 1450 aa28.01■■■□□ 2.07
SPCS2P4-201ENST00000436160 CYB5RLQ6IPT4 315 aa27.97■■■□□ 2.07
SPCS2P4-201ENST00000436160 SHROOM2Q13796 1616 aa27.89■■■□□ 2.06
SPCS2P4-201ENST00000436160 ERCC6L2Q5T890 1561 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms