RNA–Protein interactions for RNA: ENST00000333449.8

TMEM179B-201, Transcript of transmembrane protein 179B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM179B, Length 1,023 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM179B-201ENST00000333449 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
TMEM179B-201ENST00000333449 ABCC9O60706 1549 aa37.31■■■■□ 3.56
TMEM179B-201ENST00000333449 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
TMEM179B-201ENST00000333449 RB1CC1Q8TDY2 1594 aa35.46■■■■□ 3.27
TMEM179B-201ENST00000333449 NACADO15069 1562 aa35.21■■■■□ 3.23
TMEM179B-201ENST00000333449 DCAF8L2P0C7V8 631 aa35.05■■■■□ 3.2
TMEM179B-201ENST00000333449 DNAJC5BQ9UF47 199 aa35.03■■■■□ 3.2
TMEM179B-201ENST00000333449 UNC13AQ9UPW8 1703 aa34.78■■■■□ 3.16
TMEM179B-201ENST00000333449 PABPN1Q86U42 306 aaKnown RBP eCLIP34.75■■■■□ 3.15
TMEM179B-201ENST00000333449 MYO15BQ96JP2 1530 aa34.72■■■■□ 3.15
TMEM179B-201ENST00000333449 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
TMEM179B-201ENST00000333449 ZCCHC6Q5VYS8 1495 aaKnown RBP34.47■■■■□ 3.11
TMEM179B-201ENST00000333449 DCAF1Q9Y4B6 1507 aa34.3■■■■□ 3.08
TMEM179B-201ENST00000333449 SCRIBQ14160 1630 aa34.04■■■■□ 3.04
TMEM179B-201ENST00000333449 SHROOM4Q9ULL8 1493 aa33.91■■■■□ 3.02
TMEM179B-201ENST00000333449 CC2D2AQ9P2K1 1620 aa33.7■■■□□ 2.99
TMEM179B-201ENST00000333449 EIF4G1Q04637 1599 aaKnown RBP33.62■■■□□ 2.97
TMEM179B-201ENST00000333449 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
TMEM179B-201ENST00000333449 NCAPD3P42695 1498 aa32.52■■■□□ 2.8
TMEM179B-201ENST00000333449 ATAD2BQ9ULI0 1458 aa32.46■■■□□ 2.79
TMEM179B-201ENST00000333449 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
TMEM179B-201ENST00000333449 SMARCA2P51531 1590 aa32.32■■■□□ 2.77
TMEM179B-201ENST00000333449 HMGXB3Q12766 1538 aa32.29■■■□□ 2.76
TMEM179B-201ENST00000333449 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
TMEM179B-201ENST00000333449 ERCC6Q03468 1493 aa32.14■■■□□ 2.74
TMEM179B-201ENST00000333449 BAZ1BQ9UIG0 1483 aaKnown RBP32.12■■■□□ 2.73
TMEM179B-201ENST00000333449 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
TMEM179B-201ENST00000333449 NESP48681 1621 aa32.09■■■□□ 2.73
TMEM179B-201ENST00000333449 MROH2BQ7Z745 1585 aa32.09■■■□□ 2.73
TMEM179B-201ENST00000333449 CUX2O14529 1486 aa32.07■■■□□ 2.72
TMEM179B-201ENST00000333449 DNAJC5Q9H3Z4 198 aa32.04■■■□□ 2.72
TMEM179B-201ENST00000333449 LAMC3Q9Y6N6 1575 aa31.78■■■□□ 2.68
TMEM179B-201ENST00000333449 THOC2Q8NI27 1593 aaKnown RBP31.74■■■□□ 2.67
TMEM179B-201ENST00000333449 WIZO95785 1651 aa31.71■■■□□ 2.67
TMEM179B-201ENST00000333449 KIF21AQ7Z4S6 1674 aa31.67■■■□□ 2.66
TMEM179B-201ENST00000333449 PDS5BQ9NTI5 1447 aa31.57■■■□□ 2.64
TMEM179B-201ENST00000333449 CADPSQ9ULU8 1353 aa31.54■■■□□ 2.64
TMEM179B-201ENST00000333449 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
TMEM179B-201ENST00000333449 MRC2Q9UBG0 1479 aa31.34■■■□□ 2.61
TMEM179B-201ENST00000333449 WDR62O43379 1518 aa31.27■■■□□ 2.6
TMEM179B-201ENST00000333449 TOP2AP11388 1531 aaKnown RBP31.26■■■□□ 2.59
TMEM179B-201ENST00000333449 CEP164Q9UPV0 1460 aa31.21■■■□□ 2.59
TMEM179B-201ENST00000333449 CFTRP13569 1480 aa31.2■■■□□ 2.58
TMEM179B-201ENST00000333449 FANCD2Q9BXW9 1451 aa31.2■■■□□ 2.58
TMEM179B-201ENST00000333449 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
TMEM179B-201ENST00000333449 CCDC88BA6NC98 1476 aa30.93■■■□□ 2.54
TMEM179B-201ENST00000333449 PRDM2Q13029 1718 aa30.91■■■□□ 2.54
TMEM179B-201ENST00000333449 TRIM41Q8WV44 630 aa30.67■■■□□ 2.5
TMEM179B-201ENST00000333449 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
TMEM179B-201ENST00000333449 ZNF608Q9ULD9 1512 aaPredicted RBP30.61■■■□□ 2.49
TMEM179B-201ENST00000333449 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
TMEM179B-201ENST00000333449 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
TMEM179B-201ENST00000333449 DNMBPQ6XZF7 1577 aa30.5■■■□□ 2.47
TMEM179B-201ENST00000333449 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
TMEM179B-201ENST00000333449 EIF4G3O43432 1585 aaKnown RBP30.41■■■□□ 2.46
TMEM179B-201ENST00000333449 TARBP1Q13395 1621 aaKnown RBP30.38■■■□□ 2.45
TMEM179B-201ENST00000333449 POLA1P09884 1462 aaPredicted RBP30.32■■■□□ 2.44
TMEM179B-201ENST00000333449 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.44
TMEM179B-201ENST00000333449 RIMBP3CA6NJZ7 1639 aa30.29■■■□□ 2.44
TMEM179B-201ENST00000333449 RIMBP3BA6NNM3 1639 aa30.29■■■□□ 2.44
TMEM179B-201ENST00000333449 RIMBP3Q9UFD9 1639 aa30.29■■■□□ 2.44
TMEM179B-201ENST00000333449 RAD54L2Q9Y4B4 1467 aa30.24■■■□□ 2.43
TMEM179B-201ENST00000333449 CHD1O14646 1710 aa30.21■■■□□ 2.43
TMEM179B-201ENST00000333449 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
TMEM179B-201ENST00000333449 SOGA1O94964 1423 aa30.14■■■□□ 2.42
TMEM179B-201ENST00000333449 CUX1P39880 1505 aa30.14■■■□□ 2.42
TMEM179B-201ENST00000333449 FGD5Q6ZNL6 1462 aa30.13■■■□□ 2.41
TMEM179B-201ENST00000333449 TDRD9Q8NDG6 1382 aaKnown RBP30.12■■■□□ 2.41
TMEM179B-201ENST00000333449 FBLN2P98095 1184 aa30.05■■■□□ 2.4
TMEM179B-201ENST00000333449 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
TMEM179B-201ENST00000333449 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
TMEM179B-201ENST00000333449 WDR97A6NE52 1622 aa29.97■■■□□ 2.39
TMEM179B-201ENST00000333449 CYB5RLQ6IPT4 315 aa29.92■■■□□ 2.38
TMEM179B-201ENST00000333449 ARAP1Q96P48 1450 aa29.91■■■□□ 2.38
TMEM179B-201ENST00000333449 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
TMEM179B-201ENST00000333449 MAGI1Q96QZ7 1491 aaPredicted RBP29.87■■■□□ 2.37
TMEM179B-201ENST00000333449 CLASP1Q7Z460 1538 aa29.84■■■□□ 2.37
TMEM179B-201ENST00000333449 PBRM1Q86U86 1689 aa29.82■■■□□ 2.36
TMEM179B-201ENST00000333449 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
TMEM179B-201ENST00000333449 GAPVD1Q14C86 1478 aa29.79■■■□□ 2.36
TMEM179B-201ENST00000333449 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
TMEM179B-201ENST00000333449 ABCA10Q8WWZ4 1543 aa29.77■■■□□ 2.36
TMEM179B-201ENST00000333449 SYNJ1O43426 1573 aa29.77■■■□□ 2.36
TMEM179B-201ENST00000333449 ABCA5Q8WWZ7 1642 aa29.76■■■□□ 2.35
TMEM179B-201ENST00000333449 BIVM-ERCC5R4GMW8 1640 aa29.64■■■□□ 2.34
TMEM179B-201ENST00000333449 TOP2BQ02880 1626 aa29.63■■■□□ 2.33
TMEM179B-201ENST00000333449 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
TMEM179B-201ENST00000333449 TRHP20396 242 aaPredicted RBP29.54■■■□□ 2.32
TMEM179B-201ENST00000333449 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
TMEM179B-201ENST00000333449 GRIN2AQ12879 1464 aa29.51■■■□□ 2.31
TMEM179B-201ENST00000333449 CEP170Q5SW79 1584 aa29.45■■■□□ 2.31
TMEM179B-201ENST00000333449 ERCC6L2Q5T890 1561 aa29.44■■■□□ 2.3
TMEM179B-201ENST00000333449 NUP160Q12769 1436 aa29.42■■■□□ 2.3
TMEM179B-201ENST00000333449 FHAD1B1AJZ9 1412 aa29.4■■■□□ 2.3
TMEM179B-201ENST00000333449 ERICH3Q5RHP9 1530 aa29.38■■■□□ 2.29
TMEM179B-201ENST00000333449 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
TMEM179B-201ENST00000333449 PRG4Q92954 1404 aaPredicted RBP29.12■■■□□ 2.25
TMEM179B-201ENST00000333449 RUSC2Q8N2Y8 1516 aa29.11■■■□□ 2.25
TMEM179B-201ENST00000333449 JPH4Q96JJ6 628 aa29.09■■■□□ 2.25
TMEM179B-201ENST00000333449 IGF1RP08069 1367 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms