RNA–Protein interactions for RNA: ENST00000397846.7

ITGB2-204, Transcript of integrin subunit beta 2, humanhuman

TSL 2 BASIC

Gene ITGB2, Length 422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-204ENST00000397846 NISCHQ9Y2I1 1504 aa39.96■■■■□ 3.99
ITGB2-204ENST00000397846 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
ITGB2-204ENST00000397846 ABCC9O60706 1549 aa34.66■■■■□ 3.14
ITGB2-204ENST00000397846 RB1CC1Q8TDY2 1594 aa33.41■■■□□ 2.94
ITGB2-204ENST00000397846 NACADO15069 1562 aa33.39■■■□□ 2.94
ITGB2-204ENST00000397846 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
ITGB2-204ENST00000397846 ZCCHC6Q5VYS8 1495 aaKnown RBP33.33■■■□□ 2.93
ITGB2-204ENST00000397846 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
ITGB2-204ENST00000397846 DCAF1Q9Y4B6 1507 aa33.11■■■□□ 2.89
ITGB2-204ENST00000397846 UNC13AQ9UPW8 1703 aa32.51■■■□□ 2.8
ITGB2-204ENST00000397846 SCRIBQ14160 1630 aa32.4■■■□□ 2.78
ITGB2-204ENST00000397846 PABPN1Q86U42 306 aaKnown RBP eCLIP32.38■■■□□ 2.77
ITGB2-204ENST00000397846 BICRAQ9NZM4 1560 aa32.33■■■□□ 2.77
ITGB2-204ENST00000397846 SHROOM4Q9ULL8 1493 aa32.13■■■□□ 2.73
ITGB2-204ENST00000397846 DNAJC5BQ9UF47 199 aa31.66■■■□□ 2.66
ITGB2-204ENST00000397846 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.64
ITGB2-204ENST00000397846 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
ITGB2-204ENST00000397846 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
ITGB2-204ENST00000397846 BAZ1AQ9NRL2 1556 aaPredicted RBP31■■■□□ 2.55
ITGB2-204ENST00000397846 SMARCA4P51532 1647 aa30.99■■■□□ 2.55
ITGB2-204ENST00000397846 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
ITGB2-204ENST00000397846 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.52
ITGB2-204ENST00000397846 NCAPD3P42695 1498 aa30.8■■■□□ 2.52
ITGB2-204ENST00000397846 MROH2BQ7Z745 1585 aa30.78■■■□□ 2.52
ITGB2-204ENST00000397846 PEG3Q9GZU2 1588 aa30.71■■■□□ 2.51
ITGB2-204ENST00000397846 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
ITGB2-204ENST00000397846 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
ITGB2-204ENST00000397846 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
ITGB2-204ENST00000397846 WIZO95785 1651 aa30.42■■■□□ 2.46
ITGB2-204ENST00000397846 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
ITGB2-204ENST00000397846 NESP48681 1621 aa29.99■■■□□ 2.39
ITGB2-204ENST00000397846 LAMC3Q9Y6N6 1575 aa29.98■■■□□ 2.39
ITGB2-204ENST00000397846 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
ITGB2-204ENST00000397846 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
ITGB2-204ENST00000397846 PDS5BQ9NTI5 1447 aa29.81■■■□□ 2.36
ITGB2-204ENST00000397846 CCDC88BA6NC98 1476 aa29.78■■■□□ 2.36
ITGB2-204ENST00000397846 CFTRP13569 1480 aa29.75■■■□□ 2.35
ITGB2-204ENST00000397846 SUPT5HO00267 1087 aaKnown RBP29.73■■■□□ 2.35
ITGB2-204ENST00000397846 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
ITGB2-204ENST00000397846 CUX2O14529 1486 aa29.59■■■□□ 2.33
ITGB2-204ENST00000397846 FANCD2Q9BXW9 1451 aa29.57■■■□□ 2.32
ITGB2-204ENST00000397846 THOC2Q8NI27 1593 aaKnown RBP29.56■■■□□ 2.32
ITGB2-204ENST00000397846 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
ITGB2-204ENST00000397846 MRC2Q9UBG0 1479 aa29.48■■■□□ 2.31
ITGB2-204ENST00000397846 PRDM2Q13029 1718 aa29.47■■■□□ 2.31
ITGB2-204ENST00000397846 WDR62O43379 1518 aa29.38■■■□□ 2.29
ITGB2-204ENST00000397846 URB2Q14146 1524 aaKnown RBP29.24■■■□□ 2.27
ITGB2-204ENST00000397846 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
ITGB2-204ENST00000397846 TOPBP1Q92547 1522 aa29.09■■■□□ 2.25
ITGB2-204ENST00000397846 DNMBPQ6XZF7 1577 aa29.08■■■□□ 2.25
ITGB2-204ENST00000397846 IFT140Q96RY7 1462 aa28.92■■■□□ 2.22
ITGB2-204ENST00000397846 CUX1P39880 1505 aa28.89■■■□□ 2.21
ITGB2-204ENST00000397846 POLA1P09884 1462 aaPredicted RBP28.86■■■□□ 2.21
ITGB2-204ENST00000397846 FGD5Q6ZNL6 1462 aa28.79■■■□□ 2.2
ITGB2-204ENST00000397846 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
ITGB2-204ENST00000397846 TARBP1Q13395 1621 aaKnown RBP28.74■■■□□ 2.19
ITGB2-204ENST00000397846 SOGA1O94964 1423 aa28.74■■■□□ 2.19
ITGB2-204ENST00000397846 ZNF608Q9ULD9 1512 aaPredicted RBP28.73■■■□□ 2.19
ITGB2-204ENST00000397846 RAD54L2Q9Y4B4 1467 aa28.7■■■□□ 2.18
ITGB2-204ENST00000397846 TOP2BQ02880 1626 aa28.67■■■□□ 2.18
ITGB2-204ENST00000397846 EIF4G3O43432 1585 aaKnown RBP28.65■■■□□ 2.18
ITGB2-204ENST00000397846 BIVM-ERCC5R4GMW8 1640 aa28.65■■■□□ 2.18
ITGB2-204ENST00000397846 SYNJ1O43426 1573 aa28.64■■■□□ 2.18
ITGB2-204ENST00000397846 WDR97A6NE52 1622 aa28.6■■■□□ 2.17
ITGB2-204ENST00000397846 AQRO60306 1485 aaKnown RBP eCLIP28.58■■■□□ 2.17
ITGB2-204ENST00000397846 TDRD9Q8NDG6 1382 aaKnown RBP28.54■■■□□ 2.16
ITGB2-204ENST00000397846 DNAJC5Q9H3Z4 198 aa28.53■■■□□ 2.16
ITGB2-204ENST00000397846 ABCA10Q8WWZ4 1543 aa28.53■■■□□ 2.16
ITGB2-204ENST00000397846 GRIN2BQ13224 1484 aa28.42■■■□□ 2.14
ITGB2-204ENST00000397846 GAPVD1Q14C86 1478 aa28.42■■■□□ 2.14
ITGB2-204ENST00000397846 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
ITGB2-204ENST00000397846 SNAPC4Q5SXM2 1469 aa28.36■■■□□ 2.13
ITGB2-204ENST00000397846 MAGI1Q96QZ7 1491 aaPredicted RBP28.34■■■□□ 2.13
ITGB2-204ENST00000397846 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
ITGB2-204ENST00000397846 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
ITGB2-204ENST00000397846 FBLN2P98095 1184 aa28.25■■■□□ 2.11
ITGB2-204ENST00000397846 SYNJ2O15056 1496 aa28.23■■■□□ 2.11
ITGB2-204ENST00000397846 CHD1O14646 1710 aa28.21■■■□□ 2.11
ITGB2-204ENST00000397846 ERICH3Q5RHP9 1530 aa28.2■■■□□ 2.1
ITGB2-204ENST00000397846 CHMP7Q8WUX9 453 aaPredicted RBP28.2■■■□□ 2.1
ITGB2-204ENST00000397846 KIF27Q86VH2 1401 aa28.18■■■□□ 2.1
ITGB2-204ENST00000397846 ADAMTS12P58397 1594 aa28.13■■■□□ 2.09
ITGB2-204ENST00000397846 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
ITGB2-204ENST00000397846 FHAD1B1AJZ9 1412 aa28.1■■■□□ 2.09
ITGB2-204ENST00000397846 GRIN2AQ12879 1464 aa28.04■■■□□ 2.08
ITGB2-204ENST00000397846 IGF1RP08069 1367 aa27.99■■■□□ 2.07
ITGB2-204ENST00000397846 CLASP1Q7Z460 1538 aa27.97■■■□□ 2.07
ITGB2-204ENST00000397846 CUL7Q14999 1698 aa27.96■■■□□ 2.07
ITGB2-204ENST00000397846 NUP160Q12769 1436 aa27.92■■■□□ 2.06
ITGB2-204ENST00000397846 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
ITGB2-204ENST00000397846 CEP170Q5SW79 1584 aa27.87■■■□□ 2.05
ITGB2-204ENST00000397846 CARMIL1Q5VZK9 1371 aa27.86■■■□□ 2.05
ITGB2-204ENST00000397846 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
ITGB2-204ENST00000397846 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
ITGB2-204ENST00000397846 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
ITGB2-204ENST00000397846 RUSC2Q8N2Y8 1516 aa27.83■■■□□ 2.05
ITGB2-204ENST00000397846 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
ITGB2-204ENST00000397846 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.03
ITGB2-204ENST00000397846 EEA1Q15075 1411 aa27.69■■■□□ 2.02
ITGB2-204ENST00000397846 KIAA0586Q9BVV6 1533 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms