Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 AC020765.3-201ENST00000613051 740 ntBASIC12.87□□□□□ -0.35
CDC34P49427 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.87□□□□□ -0.35
CDC34P49427 AP006294.2-201ENST00000641667 209 ntBASIC12.87□□□□□ -0.35
CDC34P49427 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CDC34P49427 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CDC34P49427 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.87□□□□□ -0.35
CDC34P49427 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
CDC34P49427 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.87□□□□□ -0.35
CDC34P49427 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC34P49427 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.87□□□□□ -0.35
CDC34P49427 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.86□□□□□ -0.35
CDC34P49427 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 AC131009.4-201ENST00000624048 1740 ntBASIC12.86□□□□□ -0.35
CDC34P49427 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.86□□□□□ -0.35
CDC34P49427 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.86□□□□□ -0.35
CDC34P49427 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.86□□□□□ -0.35
CDC34P49427 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.86□□□□□ -0.35
CDC34P49427 AC091167.2-201ENST00000579581 588 ntBASIC12.86□□□□□ -0.35
CDC34P49427 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC34P49427 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 SIGLEC16-201ENST00000599858 1437 ntBASIC12.86□□□□□ -0.35
CDC34P49427 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC34P49427 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC34P49427 AC007292.2-201ENST00000593524 1812 ntBASIC12.85□□□□□ -0.35
CDC34P49427 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.85□□□□□ -0.35
CDC34P49427 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.85□□□□□ -0.35
CDC34P49427 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CDC34P49427 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 CICP24-201ENST00000605464 2705 ntBASIC12.85□□□□□ -0.35
CDC34P49427 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CDC34P49427 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
CDC34P49427 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 AL592424.1-201ENST00000563624 1536 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms