RNA–Protein interactions for RNA: ENST00000572441.5

ABR-217, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4 BASIC

Gene ABR, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-217ENST00000572441 NISCHQ9Y2I1 1504 aa43.49■■■■■ 4.55
ABR-217ENST00000572441 ABCC9O60706 1549 aa39.1■■■■□ 3.85
ABR-217ENST00000572441 CCDC180Q9P1Z9 1646 aa38.85■■■■□ 3.81
ABR-217ENST00000572441 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
ABR-217ENST00000572441 DNAJC5BQ9UF47 199 aa36.98■■■■□ 3.51
ABR-217ENST00000572441 NACADO15069 1562 aa36.77■■■■□ 3.48
ABR-217ENST00000572441 DCAF8L2P0C7V8 631 aa36.51■■■■□ 3.44
ABR-217ENST00000572441 PABPN1Q86U42 306 aaKnown RBP eCLIP36.39■■■■□ 3.42
ABR-217ENST00000572441 UNC13AQ9UPW8 1703 aa36.35■■■■□ 3.41
ABR-217ENST00000572441 ZCCHC6Q5VYS8 1495 aaKnown RBP36.21■■■■□ 3.39
ABR-217ENST00000572441 MYO15BQ96JP2 1530 aa36.21■■■■□ 3.39
ABR-217ENST00000572441 BICRAQ9NZM4 1560 aa36.14■■■■□ 3.38
ABR-217ENST00000572441 DCAF1Q9Y4B6 1507 aa35.97■■■■□ 3.35
ABR-217ENST00000572441 SCRIBQ14160 1630 aa35.44■■■■□ 3.26
ABR-217ENST00000572441 SHROOM4Q9ULL8 1493 aa35.44■■■■□ 3.26
ABR-217ENST00000572441 CC2D2AQ9P2K1 1620 aa35.32■■■■□ 3.24
ABR-217ENST00000572441 CECR2Q9BXF3 1484 aa35.21■■■■□ 3.23
ABR-217ENST00000572441 EIF4G1Q04637 1599 aaKnown RBP35.18■■■■□ 3.22
ABR-217ENST00000572441 NCAPD3P42695 1498 aa34■■■■□ 3.03
ABR-217ENST00000572441 DNAJC5Q9H3Z4 198 aa33.96■■■■□ 3.03
ABR-217ENST00000572441 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
ABR-217ENST00000572441 SMARCA4P51532 1647 aa33.79■■■■□ 3
ABR-217ENST00000572441 BAZ1AQ9NRL2 1556 aaPredicted RBP33.73■■■□□ 2.99
ABR-217ENST00000572441 CUX2O14529 1486 aa33.69■■■□□ 2.98
ABR-217ENST00000572441 HMGXB3Q12766 1538 aa33.69■■■□□ 2.98
ABR-217ENST00000572441 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
ABR-217ENST00000572441 ERCC6Q03468 1493 aa33.66■■■□□ 2.98
ABR-217ENST00000572441 NESP48681 1621 aa33.6■■■□□ 2.97
ABR-217ENST00000572441 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.96
ABR-217ENST00000572441 BAZ1BQ9UIG0 1483 aaKnown RBP33.48■■■□□ 2.95
ABR-217ENST00000572441 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
ABR-217ENST00000572441 THOC2Q8NI27 1593 aaKnown RBP33.26■■■□□ 2.92
ABR-217ENST00000572441 LAMC3Q9Y6N6 1575 aa33.21■■■□□ 2.91
ABR-217ENST00000572441 WIZO95785 1651 aa33.17■■■□□ 2.9
ABR-217ENST00000572441 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
ABR-217ENST00000572441 KIF21AQ7Z4S6 1674 aa33.11■■■□□ 2.89
ABR-217ENST00000572441 PDS5BQ9NTI5 1447 aa32.98■■■□□ 2.87
ABR-217ENST00000572441 CADPSQ9ULU8 1353 aa32.93■■■□□ 2.86
ABR-217ENST00000572441 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.84
ABR-217ENST00000572441 MRC2Q9UBG0 1479 aa32.77■■■□□ 2.84
ABR-217ENST00000572441 WDR62O43379 1518 aa32.72■■■□□ 2.83
ABR-217ENST00000572441 CEP164Q9UPV0 1460 aa32.57■■■□□ 2.8
ABR-217ENST00000572441 FANCD2Q9BXW9 1451 aa32.56■■■□□ 2.8
ABR-217ENST00000572441 CFTRP13569 1480 aa32.54■■■□□ 2.8
ABR-217ENST00000572441 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
ABR-217ENST00000572441 URB2Q14146 1524 aaKnown RBP32.37■■■□□ 2.77
ABR-217ENST00000572441 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
ABR-217ENST00000572441 SUPT5HO00267 1087 aaKnown RBP32.31■■■□□ 2.76
ABR-217ENST00000572441 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
ABR-217ENST00000572441 OSCARQ8IYS5 282 aa32.11■■■□□ 2.73
ABR-217ENST00000572441 ZNF608Q9ULD9 1512 aaPredicted RBP32.02■■■□□ 2.72
ABR-217ENST00000572441 TOPBP1Q92547 1522 aa31.95■■■□□ 2.71
ABR-217ENST00000572441 IFT140Q96RY7 1462 aa31.94■■■□□ 2.7
ABR-217ENST00000572441 RIMBP3CA6NJZ7 1639 aa31.81■■■□□ 2.68
ABR-217ENST00000572441 RIMBP3BA6NNM3 1639 aa31.81■■■□□ 2.68
ABR-217ENST00000572441 RIMBP3Q9UFD9 1639 aa31.81■■■□□ 2.68
ABR-217ENST00000572441 DNMBPQ6XZF7 1577 aa31.78■■■□□ 2.68
ABR-217ENST00000572441 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
ABR-217ENST00000572441 ABCC8Q09428 1581 aa31.74■■■□□ 2.67
ABR-217ENST00000572441 TARBP1Q13395 1621 aaKnown RBP31.71■■■□□ 2.67
ABR-217ENST00000572441 ARHGEF11O15085 1522 aa31.67■■■□□ 2.66
ABR-217ENST00000572441 AQRO60306 1485 aaKnown RBP eCLIP31.66■■■□□ 2.66
ABR-217ENST00000572441 POLA1P09884 1462 aaPredicted RBP31.61■■■□□ 2.65
ABR-217ENST00000572441 CHD1O14646 1710 aa31.58■■■□□ 2.65
ABR-217ENST00000572441 RAD54L2Q9Y4B4 1467 aa31.54■■■□□ 2.64
ABR-217ENST00000572441 CUX1P39880 1505 aa31.44■■■□□ 2.62
ABR-217ENST00000572441 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
ABR-217ENST00000572441 SOGA1O94964 1423 aa31.42■■■□□ 2.62
ABR-217ENST00000572441 CYB5RLQ6IPT4 315 aa31.41■■■□□ 2.62
ABR-217ENST00000572441 FGD5Q6ZNL6 1462 aa31.39■■■□□ 2.62
ABR-217ENST00000572441 ARAP1Q96P48 1450 aa31.39■■■□□ 2.62
ABR-217ENST00000572441 FBLN2P98095 1184 aa31.38■■■□□ 2.61
ABR-217ENST00000572441 SNAPC4Q5SXM2 1469 aa31.31■■■□□ 2.6
ABR-217ENST00000572441 WRNQ14191 1432 aaPredicted RBP eCLIP31.25■■■□□ 2.59
ABR-217ENST00000572441 WDR97A6NE52 1622 aa31.24■■■□□ 2.59
ABR-217ENST00000572441 CLASP1Q7Z460 1538 aa31.24■■■□□ 2.59
ABR-217ENST00000572441 TOP2BQ02880 1626 aa31.17■■■□□ 2.58
ABR-217ENST00000572441 MAGI1Q96QZ7 1491 aaPredicted RBP31.17■■■□□ 2.58
ABR-217ENST00000572441 BIVM-ERCC5R4GMW8 1640 aa31.16■■■□□ 2.58
ABR-217ENST00000572441 GRIN2BQ13224 1484 aa31.15■■■□□ 2.58
ABR-217ENST00000572441 SYNJ1O43426 1573 aa31.15■■■□□ 2.58
ABR-217ENST00000572441 CHMP7Q8WUX9 453 aaPredicted RBP31.12■■■□□ 2.57
ABR-217ENST00000572441 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
ABR-217ENST00000572441 PBRM1Q86U86 1689 aa31.06■■■□□ 2.56
ABR-217ENST00000572441 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
ABR-217ENST00000572441 TRHP20396 242 aaPredicted RBP31.05■■■□□ 2.56
ABR-217ENST00000572441 GAPVD1Q14C86 1478 aa31.04■■■□□ 2.56
ABR-217ENST00000572441 ABCA5Q8WWZ7 1642 aa31■■■□□ 2.55
ABR-217ENST00000572441 ERCC6L2Q5T890 1561 aa30.81■■■□□ 2.52
ABR-217ENST00000572441 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
ABR-217ENST00000572441 ADAMTS12P58397 1594 aa30.77■■■□□ 2.52
ABR-217ENST00000572441 CEP170Q5SW79 1584 aa30.74■■■□□ 2.51
ABR-217ENST00000572441 NUP160Q12769 1436 aa30.73■■■□□ 2.51
ABR-217ENST00000572441 ERICH3Q5RHP9 1530 aa30.69■■■□□ 2.5
ABR-217ENST00000572441 FHAD1B1AJZ9 1412 aa30.63■■■□□ 2.49
ABR-217ENST00000572441 KIF27Q86VH2 1401 aa30.63■■■□□ 2.49
ABR-217ENST00000572441 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
ABR-217ENST00000572441 IGF1RP08069 1367 aa30.46■■■□□ 2.47
ABR-217ENST00000572441 CUL7Q14999 1698 aa30.41■■■□□ 2.46
ABR-217ENST00000572441 PRG4Q92954 1404 aaPredicted RBP30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 474 ms