RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 NISCHQ9Y2I1 1504 aa27.2■■□□□ 1.94
AP000550.1-201ENST00000420508 DCAF8L2P0C7V8 631 aa25.36■■□□□ 1.65
AP000550.1-201ENST00000420508 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
AP000550.1-201ENST00000420508 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
AP000550.1-201ENST00000420508 APLP2Q06481 763 aa23.1■■□□□ 1.29
AP000550.1-201ENST00000420508 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
AP000550.1-201ENST00000420508 ZEB1P37275 1124 aaPredicted RBP23.02■■□□□ 1.28
AP000550.1-201ENST00000420508 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
AP000550.1-201ENST00000420508 FAM9AQ8IZU1 332 aaPredicted RBP22.87■■□□□ 1.25
AP000550.1-201ENST00000420508 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
AP000550.1-201ENST00000420508 EHMT2Q96KQ7 1210 aa22.83■■□□□ 1.25
AP000550.1-201ENST00000420508 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
AP000550.1-201ENST00000420508 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
AP000550.1-201ENST00000420508 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
AP000550.1-201ENST00000420508 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
AP000550.1-201ENST00000420508 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
AP000550.1-201ENST00000420508 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
AP000550.1-201ENST00000420508 ABCC9O60706 1549 aa22.38■■□□□ 1.17
AP000550.1-201ENST00000420508 CENPBP07199 599 aaPredicted RBP22.29■■□□□ 1.16
AP000550.1-201ENST00000420508 HRCP23327 699 aa22.29■■□□□ 1.16
AP000550.1-201ENST00000420508 TTBK1Q5TCY1 1321 aaPredicted RBP22.15■■□□□ 1.14
AP000550.1-201ENST00000420508 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
AP000550.1-201ENST00000420508 LOC105371045A0A1W2PR82 267 aa22.08■■□□□ 1.12
AP000550.1-201ENST00000420508 RANGAP1P46060 587 aaPredicted RBP22.03■■□□□ 1.12
AP000550.1-201ENST00000420508 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
AP000550.1-201ENST00000420508 ATP1B4Q9UN42 357 aaPredicted RBP21.9■■□□□ 1.1
AP000550.1-201ENST00000420508 NACADO15069 1562 aa21.87■■□□□ 1.09
AP000550.1-201ENST00000420508 RB1CC1Q8TDY2 1594 aa21.82■■□□□ 1.08
AP000550.1-201ENST00000420508 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
AP000550.1-201ENST00000420508 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.06
AP000550.1-201ENST00000420508 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.05
AP000550.1-201ENST00000420508 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
AP000550.1-201ENST00000420508 NEFLP07196 543 aa21.54■■□□□ 1.04
AP000550.1-201ENST00000420508 MYO15BQ96JP2 1530 aa21.54■■□□□ 1.04
AP000550.1-201ENST00000420508 HNRNPUL2Q1KMD3 747 aaKnown RBP21.5■■□□□ 1.03
AP000550.1-201ENST00000420508 EEA1Q15075 1411 aa21.46■■□□□ 1.03
AP000550.1-201ENST00000420508 MYT1Q01538 1121 aa21.43■■□□□ 1.02
AP000550.1-201ENST00000420508 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
AP000550.1-201ENST00000420508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
AP000550.1-201ENST00000420508 ITGAEP38570 1179 aa21.34■■□□□ 1.01
AP000550.1-201ENST00000420508 DIEXFQ68CQ4 756 aaKnown RBP21.31■■□□□ 1
AP000550.1-201ENST00000420508 YTHDC1Q96MU7 727 aaKnown RBP21.31■■□□□ 1
AP000550.1-201ENST00000420508 ERICH6Q7L0X2 663 aa21.25■□□□□ 0.99
AP000550.1-201ENST00000420508 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
AP000550.1-201ENST00000420508 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
AP000550.1-201ENST00000420508 ZNF316A6NFI3 1004 aaPredicted RBP21.11■□□□□ 0.97
AP000550.1-201ENST00000420508 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
AP000550.1-201ENST00000420508 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
AP000550.1-201ENST00000420508 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
AP000550.1-201ENST00000420508 CLIP1P30622 1438 aa20.99■□□□□ 0.95
AP000550.1-201ENST00000420508 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
AP000550.1-201ENST00000420508 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
AP000550.1-201ENST00000420508 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
AP000550.1-201ENST00000420508 CDK11AQ9UQ88 783 aaPredicted RBP20.92■□□□□ 0.94
AP000550.1-201ENST00000420508 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
AP000550.1-201ENST00000420508 CLSPNQ9HAW4 1339 aa20.9■□□□□ 0.94
AP000550.1-201ENST00000420508 MROH2BQ7Z745 1585 aa20.88■□□□□ 0.93
AP000550.1-201ENST00000420508 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
AP000550.1-201ENST00000420508 KIF27Q86VH2 1401 aa20.85■□□□□ 0.93
AP000550.1-201ENST00000420508 ACIN1Q9UKV3 1341 aaKnown RBP20.85■□□□□ 0.93
AP000550.1-201ENST00000420508 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
AP000550.1-201ENST00000420508 TOP2AP11388 1531 aaKnown RBP20.84■□□□□ 0.93
AP000550.1-201ENST00000420508 ANP32CO43423 234 aa20.84■□□□□ 0.93
AP000550.1-201ENST00000420508 NEUROD1Q13562 356 aa20.81■□□□□ 0.92
AP000550.1-201ENST00000420508 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
AP000550.1-201ENST00000420508 CCDC88BA6NC98 1476 aa20.72■□□□□ 0.91
AP000550.1-201ENST00000420508 P3H3Q8IVL6 736 aa20.71■□□□□ 0.91
AP000550.1-201ENST00000420508 TONSLQ96HA7 1378 aa20.65■□□□□ 0.9
AP000550.1-201ENST00000420508 GTF3C3Q9Y5Q9 886 aa20.62■□□□□ 0.89
AP000550.1-201ENST00000420508 FBLN2P98095 1184 aa20.61■□□□□ 0.89
AP000550.1-201ENST00000420508 MTUS2Q5JR59 1369 aa20.61■□□□□ 0.89
AP000550.1-201ENST00000420508 WIZO95785 1651 aa20.61■□□□□ 0.89
AP000550.1-201ENST00000420508 SMARCA4P51532 1647 aa20.61■□□□□ 0.89
AP000550.1-201ENST00000420508 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
AP000550.1-201ENST00000420508 DAXXQ9UER7 740 aaPredicted RBP20.55■□□□□ 0.88
AP000550.1-201ENST00000420508 VPS8Q8N3P4 1428 aa20.5■□□□□ 0.87
AP000550.1-201ENST00000420508 SOGA1O94964 1423 aa20.49■□□□□ 0.87
AP000550.1-201ENST00000420508 ABCC8Q09428 1581 aa20.44■□□□□ 0.86
AP000550.1-201ENST00000420508 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
AP000550.1-201ENST00000420508 ZNF326Q5BKZ1 582 aaKnown RBP20.39■□□□□ 0.85
AP000550.1-201ENST00000420508 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.85
AP000550.1-201ENST00000420508 CUX2O14529 1486 aa20.38■□□□□ 0.85
AP000550.1-201ENST00000420508 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
AP000550.1-201ENST00000420508 TIMELESSQ9UNS1 1208 aa20.34■□□□□ 0.85
AP000550.1-201ENST00000420508 CHMP7Q8WUX9 453 aaPredicted RBP20.33■□□□□ 0.85
AP000550.1-201ENST00000420508 CCNB3Q8WWL7 1395 aa20.33■□□□□ 0.84
AP000550.1-201ENST00000420508 TSPY4P0CV99 314 aa20.31■□□□□ 0.84
AP000550.1-201ENST00000420508 TSPY10P0CW01 314 aa20.31■□□□□ 0.84
AP000550.1-201ENST00000420508 ARID3CA6NKF2 412 aa20.29■□□□□ 0.84
AP000550.1-201ENST00000420508 CNGB1Q14028 1251 aaPredicted RBP20.29■□□□□ 0.84
AP000550.1-201ENST00000420508 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
AP000550.1-201ENST00000420508 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
AP000550.1-201ENST00000420508 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
AP000550.1-201ENST00000420508 RTL5Q5HYW3 569 aaPredicted RBP20.22■□□□□ 0.83
AP000550.1-201ENST00000420508 DDX10Q13206 875 aaKnown RBP20.21■□□□□ 0.83
AP000550.1-201ENST00000420508 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
AP000550.1-201ENST00000420508 EIF4G2P78344 907 aaKnown RBP eCLIP20.19■□□□□ 0.82
AP000550.1-201ENST00000420508 PLEKHD1A6NEE1 506 aa20.18■□□□□ 0.82
AP000550.1-201ENST00000420508 CHIC2Q9UKJ5 165 aa20.18■□□□□ 0.82
AP000550.1-201ENST00000420508 RAPGEF2Q9Y4G8 1499 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms