Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 MCM4-203ENST00000518221 572 ntTSL 410.93□□□□□ -0.668e-6■■□□□ 12.6
RPS3P23396 TMEM101-203ENST00000586174 593 ntTSL 410.86□□□□□ -0.674e-7■■□□□ 12.6
RPS3P23396 SRP54-205ENST00000554803 572 ntTSL 410.76□□□□□ -0.698e-6■■□□□ 12.6
RPS3P23396 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.744e-8■■□□□ 12.6
RPS3P23396 ARL1-201ENST00000261636 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.768e-6■■□□□ 12.6
RPS3P23396 SRP54-208ENST00000555557 1949 ntTSL 2 BASIC10.08□□□□□ -0.88e-6■■□□□ 12.6
RPS3P23396 DRC3-214ENST00000583171 878 ntTSL 39.99□□□□□ -0.818e-6■■□□□ 12.6
RPS3P23396 ANAPC7-212ENST00000552170 579 ntTSL 49.95□□□□□ -0.828e-6■■□□□ 12.6
RPS3P23396 KAT5-209ENST00000530605 499 ntTSL 39.88□□□□□ -0.838e-6■■□□□ 12.6
RPS3P23396 ARL1-210ENST00000551688 470 ntTSL 4 BASIC9.85□□□□□ -0.838e-6■■□□□ 12.6
RPS3P23396 TMEM101-208ENST00000592127 576 ntTSL 49.71□□□□□ -0.869e-7■■□□□ 12.6
RPS3P23396 ABCE1-207ENST00000507193 2146 ntTSL 1 (best)9.71□□□□□ -0.868e-6■■□□□ 12.6
RPS3P23396 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.898e-6■■□□□ 12.6
RPS3P23396 MED8-202ENST00000372455 1186 ntTSL 1 (best) BASIC9.45□□□□□ -0.98e-6■■□□□ 12.6
RPS3P23396 SRP54-210ENST00000556380 600 ntTSL 39.43□□□□□ -0.98e-6■■□□□ 12.6
RPS3P23396 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.948e-6■■□□□ 12.6
RPS3P23396 ABCE1-206ENST00000506506 421 ntTSL 39.17□□□□□ -0.948e-6■■□□□ 12.6
RPS3P23396 ARL1-205ENST00000549283 566 ntTSL 49.04□□□□□ -0.968e-6■■□□□ 12.6
RPS3P23396 ARL1-206ENST00000549302 725 ntTSL 39.04□□□□□ -0.968e-6■■□□□ 12.6
RPS3P23396 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC9.01□□□□□ -0.978e-6■■□□□ 12.6
RPS3P23396 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.978e-6■■□□□ 12.6
RPS3P23396 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.038e-6■■□□□ 12.6
RPS3P23396 ABCE1-203ENST00000502803 782 ntTSL 58.51□□□□□ -1.058e-6■■□□□ 12.6
RPS3P23396 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.47□□□□□ -1.058e-6■■□□□ 12.6
RPS3P23396 HDAC1-202ENST00000428704 664 ntTSL 28.37□□□□□ -1.078e-6■■□□□ 12.6
RPS3P23396 ARL1-203ENST00000539055 1231 ntTSL 2 BASIC8.26□□□□□ -1.098e-6■■□□□ 12.6
RPS3P23396 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.1□□□□□ -1.118e-6■■□□□ 12.6
RPS3P23396 HOXC10-205ENST00000515593 526 ntTSL 47.96□□□□□ -1.144e-8■■□□□ 12.6
RPS3P23396 ANAPC7-208ENST00000546720 772 ntTSL 27.73□□□□□ -1.178e-6■■□□□ 12.6
RPS3P23396 RAD51-206ENST00000527860 566 ntTSL 47.66□□□□□ -1.188e-6■■□□□ 12.6
RPS3P23396 MED8-204ENST00000460803 710 ntTSL 27.54□□□□□ -1.28e-6■■□□□ 12.6
RPS3P23396 IPO11-205ENST00000424533 3005 ntTSL 27.45□□□□□ -1.228e-6■■□□□ 12.6
RPS3P23396 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.228e-6■■□□□ 12.6
RPS3P23396 CCT6A-204ENST00000466479 745 ntTSL 27.35□□□□□ -1.236e-10■■□□□ 12.6
RPS3P23396 PPIE-209ENST00000474804 793 ntTSL 57.24□□□□□ -1.258e-6■■□□□ 12.6
RPS3P23396 PPIE-215ENST00000497370 913 ntTSL 57.04□□□□□ -1.288e-6■■□□□ 12.6
RPS3P23396 MED8-205ENST00000473560 979 ntTSL 36.94□□□□□ -1.38e-6■■□□□ 12.6
RPS3P23396 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.338e-6■■□□□ 12.6
RPS3P23396 IPO11-214ENST00000514647 584 ntTSL 26.68□□□□□ -1.348e-6■■□□□ 12.6
RPS3P23396 HDAC1-205ENST00000472928 532 ntTSL 26.21□□□□□ -1.428e-6■■□□□ 12.6
RPS3P23396 TMPO-213ENST00000556678 713 ntTSL 56.19□□□□□ -1.428e-6■■□□□ 12.6
RPS3P23396 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.428e-6■■□□□ 12.6
RPS3P23396 YME1L1-205ENST00000427324 775 ntTSL 36.07□□□□□ -1.448e-6■■□□□ 12.6
RPS3P23396 CCT6A-209ENST00000494736 411 ntTSL 25.73□□□□□ -1.496e-10■■□□□ 12.6
RPS3P23396 TPR-203ENST00000467810 581 ntTSL 25.41□□□□□ -1.548e-6■■□□□ 12.6
RPS3P23396 SF3B3-213ENST00000569687 333 ntTSL 45.35□□□□□ -1.558e-6■■□□□ 12.6
RPS3P23396 TMPO-210ENST00000551987 727 ntTSL 25.33□□□□□ -1.568e-6■■□□□ 12.6
RPS3P23396 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.598e-6■■□□□ 12.6
RPS3P23396 ANO10-204ENST00000413397 511 ntTSL 44.99□□□□□ -1.618e-6■■□□□ 12.6
RPS3P23396 CAPRIN1-211ENST00000532755 565 ntTSL 44.76□□□□□ -1.658e-6■■□□□ 12.6
RPS3P23396 CTNNA1-212ENST00000518919 498 ntTSL 1 (best)4.59□□□□□ -1.671e-10■■□□□ 12.6
RPS3P23396 EIF3L-208ENST00000451427 583 ntTSL 44.53□□□□□ -1.688e-6■■□□□ 12.6
RPS3P23396 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.698e-6■■□□□ 12.6
RPS3P23396 ANO10-210ENST00000439141 560 ntTSL 43.36□□□□□ -1.878e-6■■□□□ 12.6
RPS3P23396 SLC38A2-207ENST00000548870 576 ntTSL 23.2□□□□□ -1.98e-6■■□□□ 12.6
RPS3P23396 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.15□□□□□ -1.918e-6■■□□□ 12.6
RPS3P23396 EIF3M-204ENST00000525054 592 ntTSL 23.14□□□□□ -1.918e-6■■□□□ 12.6
RPS3P23396 EIF3M-206ENST00000526267 662 ntTSL 23.14□□□□□ -1.918e-6■■□□□ 12.6
RPS3P23396 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.51□□□□□ -2.018e-6■■□□□ 12.6
RPS3P23396 ACOT13-202ENST00000476436 733 ntTSL 32.41□□□□□ -2.028e-6■■□□□ 12.6
RPS3P23396 SRP54-209ENST00000555746 558 ntTSL 42.23□□□□□ -2.058e-6■■□□□ 12.6
RPS3P23396 TFAM-203ENST00000395377 663 ntTSL 22.07□□□□□ -2.088e-6■■□□□ 12.6
RPS3P23396 CD52-202ENST00000470468 381 ntTSL 31.44□□□□□ -2.188e-6■■□□□ 12.6
RPS3P23396 TMEM50A-204ENST00000487234 511 ntTSL 30.85□□□□□ -2.274e-8■■□□□ 12.6
RPS3P23396 IARS-209ENST00000473915 610 ntTSL 30.75□□□□□ -2.298e-6■■□□□ 12.6
RPS3P23396 CCT6A-206ENST00000482776 765 ntTSL 2-0.05□□□□□ -2.428e-6■■□□□ 12.6
RPS3P23396 NDRG1-223ENST00000522665 411 ntTSL 214.97□□□□□ -0.012e-17■■□□□ 12.6
RPS3P23396 PON2-207ENST00000469716 573 ntTSL 323.07■■□□□ 1.284e-9■■□□□ 12.6
RPS3P23396 PON2-209ENST00000471883 451 ntTSL 321.2■□□□□ 0.984e-9■■□□□ 12.6
RPS3P23396 PON2-215ENST00000493469 579 ntTSL 216.78■□□□□ 0.284e-9■■□□□ 12.6
RPS3P23396 DBI-207ENST00000492375 784 ntTSL 28.43□□□□□ -1.069e-13■■□□□ 12.6
RPS3P23396 ANXA4-206ENST00000468815 521 ntTSL 313.56□□□□□ -0.244e-10■■□□□ 12.6
RPS3P23396 ANXA4-208ENST00000472124 376 ntTSL 37.57□□□□□ -1.24e-10■■□□□ 12.6
RPS3P23396 MARS-226ENST00000551892 748 ntTSL 320.97■□□□□ 0.957e-9■■□□□ 12.6
RPS3P23396 EIF3B-203ENST00000413917 962 ntTSL 219.68■□□□□ 0.749e-7■■□□□ 12.6
RPS3P23396 EIF3B-204ENST00000431643 1074 ntTSL 516.34■□□□□ 0.219e-7■■□□□ 12.6
RPS3P23396 PSME4-208ENST00000481518 886 ntTSL 522.26■■□□□ 1.154e-13■■□□□ 12.6
RPS3P23396 PSME4-201ENST00000389993 6581 ntTSL 1 (best)13.82□□□□□ -0.24e-13■■□□□ 12.6
RPS3P23396 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.374e-13■■□□□ 12.6
RPS3P23396 OBSL1-208ENST00000465149 5380 ntTSL 218.65■□□□□ 0.583e-7■■□□□ 12.6
RPS3P23396 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.472e-6■■□□□ 12.6
RPS3P23396 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.652e-7■■□□□ 12.6
RPS3P23396 SUB1-205ENST00000504789 570 ntTSL 418.89■□□□□ 0.611e-6■■□□□ 12.6
RPS3P23396 SUB1-204ENST00000504016 509 ntTSL 31.05□□□□□ -2.241e-6■■□□□ 12.6
RPS3P23396 NDUFC1-204ENST00000503453 682 ntTSL 317.16■□□□□ 0.349e-8■■□□□ 12.6
RPS3P23396 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.019e-8■■□□□ 12.6
RPS3P23396 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.029e-8■■□□□ 12.6
RPS3P23396 NDUFC1-202ENST00000394225 664 ntTSL 214.94□□□□□ -0.029e-8■■□□□ 12.6
RPS3P23396 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.079e-8■■□□□ 12.6
RPS3P23396 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.199e-8■■□□□ 12.6
RPS3P23396 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.199e-8■■□□□ 12.6
RPS3P23396 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.59e-8■■□□□ 12.6
RPS3P23396 NDUFC1-205ENST00000503997 628 ntTSL 310.23□□□□□ -0.779e-8■■□□□ 12.6
RPS3P23396 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.29■□□□□ 0.685e-8■■□□□ 12.6
RPS3P23396 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.44□□□□□ -0.15e-8■■□□□ 12.6
RPS3P23396 FAM83A-208ENST00000536633 3701 ntTSL 2 BASIC10.55□□□□□ -0.725e-8■■□□□ 12.6
RPS3P23396 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC10.79□□□□□ -0.687e-8■■□□□ 12.6
RPS3P23396 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC10.14□□□□□ -0.797e-8■■□□□ 12.6
RPS3P23396 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC9.08□□□□□ -0.967e-8■■□□□ 12.6
RPS3P23396 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.187e-8■■□□□ 12.6
Retrieved 100 of 24,271 protein–RNA pairs in 200.5 ms