RNA–Protein interactions for RNA: ENST00000261636.12

ARL1-201, Transcript of ADP ribosylation factor like GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARL1, Length 3,241 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1-201ENST00000261636 NISCHQ9Y2I1 1504 aa20.19■□□□□ 0.82
ARL1-201ENST00000261636 SHROOM4Q9ULL8 1493 aa18.25■□□□□ 0.51
ARL1-201ENST00000261636 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
ARL1-201ENST00000261636 HRCP23327 699 aa18.06■□□□□ 0.48
ARL1-201ENST00000261636 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
ARL1-201ENST00000261636 PPARGC1BQ86YN6 1023 aaKnown RBP17.91■□□□□ 0.46
ARL1-201ENST00000261636 MYO15BQ96JP2 1530 aa17.71■□□□□ 0.43
ARL1-201ENST00000261636 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
ARL1-201ENST00000261636 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
ARL1-201ENST00000261636 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
ARL1-201ENST00000261636 TRIM26Q12899 539 aaPredicted RBP17.18■□□□□ 0.34
ARL1-201ENST00000261636 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
ARL1-201ENST00000261636 PELP1Q8IZL8 1130 aaKnown RBP17.12■□□□□ 0.33
ARL1-201ENST00000261636 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
ARL1-201ENST00000261636 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
ARL1-201ENST00000261636 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
ARL1-201ENST00000261636 ZEB1P37275 1124 aaPredicted RBP16.91■□□□□ 0.3
ARL1-201ENST00000261636 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
ARL1-201ENST00000261636 CCDC180Q9P1Z9 1646 aa16.84■□□□□ 0.29
ARL1-201ENST00000261636 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
ARL1-201ENST00000261636 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
ARL1-201ENST00000261636 ACIN1Q9UKV3 1341 aaKnown RBP16.66■□□□□ 0.26
ARL1-201ENST00000261636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.26
ARL1-201ENST00000261636 GTF3C3Q9Y5Q9 886 aa16.62■□□□□ 0.25
ARL1-201ENST00000261636 CCER1Q8TC90 406 aaPredicted RBP16.56■□□□□ 0.24
ARL1-201ENST00000261636 TTBK1Q5TCY1 1321 aaPredicted RBP16.5■□□□□ 0.23
ARL1-201ENST00000261636 DIEXFQ68CQ4 756 aaKnown RBP16.49■□□□□ 0.23
ARL1-201ENST00000261636 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
ARL1-201ENST00000261636 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
ARL1-201ENST00000261636 MYT1Q01538 1121 aa16.34■□□□□ 0.21
ARL1-201ENST00000261636 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.2
ARL1-201ENST00000261636 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
ARL1-201ENST00000261636 ABCC9O60706 1549 aa16.21■□□□□ 0.19
ARL1-201ENST00000261636 ZNF316A6NFI3 1004 aaPredicted RBP16.13■□□□□ 0.17
ARL1-201ENST00000261636 MIER1Q8N108 512 aa16.11■□□□□ 0.17
ARL1-201ENST00000261636 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
ARL1-201ENST00000261636 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
ARL1-201ENST00000261636 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.15
ARL1-201ENST00000261636 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
ARL1-201ENST00000261636 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
ARL1-201ENST00000261636 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
ARL1-201ENST00000261636 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.12
ARL1-201ENST00000261636 CCDC88BA6NC98 1476 aa15.79■□□□□ 0.12
ARL1-201ENST00000261636 SOGA1O94964 1423 aa15.78■□□□□ 0.12
ARL1-201ENST00000261636 WIZO95785 1651 aa15.78■□□□□ 0.12
ARL1-201ENST00000261636 SUPT16HQ9Y5B9 1047 aaKnown RBP15.77■□□□□ 0.12
ARL1-201ENST00000261636 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.11
ARL1-201ENST00000261636 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
ARL1-201ENST00000261636 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
ARL1-201ENST00000261636 TNIKQ9UKE5 1360 aa15.71■□□□□ 0.1
ARL1-201ENST00000261636 RUSC2Q8N2Y8 1516 aa15.69■□□□□ 0.1
ARL1-201ENST00000261636 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
ARL1-201ENST00000261636 BCANQ96GW7 911 aa15.65■□□□□ 0.1
ARL1-201ENST00000261636 ANP32EQ9BTT0 268 aa15.62■□□□□ 0.09
ARL1-201ENST00000261636 APLP2Q06481 763 aa15.61■□□□□ 0.09
ARL1-201ENST00000261636 BCL11AQ9H165 835 aa15.58■□□□□ 0.08
ARL1-201ENST00000261636 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
ARL1-201ENST00000261636 EIF4G1Q04637 1599 aaKnown RBP15.54■□□□□ 0.08
ARL1-201ENST00000261636 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
ARL1-201ENST00000261636 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
ARL1-201ENST00000261636 CLSPNQ9HAW4 1339 aa15.47■□□□□ 0.07
ARL1-201ENST00000261636 CLIP1P30622 1438 aa15.47■□□□□ 0.07
ARL1-201ENST00000261636 FKBP8Q14318 412 aa15.46■□□□□ 0.07
ARL1-201ENST00000261636 ITGAEP38570 1179 aa15.43■□□□□ 0.06
ARL1-201ENST00000261636 EEA1Q15075 1411 aa15.42■□□□□ 0.06
ARL1-201ENST00000261636 DHX57Q6P158 1386 aaKnown RBP15.42■□□□□ 0.06
ARL1-201ENST00000261636 VPS8Q8N3P4 1428 aa15.37■□□□□ 0.05
ARL1-201ENST00000261636 TOP2AP11388 1531 aaKnown RBP15.36■□□□□ 0.05
ARL1-201ENST00000261636 NACADO15069 1562 aa15.36■□□□□ 0.05
ARL1-201ENST00000261636 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
ARL1-201ENST00000261636 KANK4Q5T7N3 995 aaPredicted RBP15.35■□□□□ 0.05
ARL1-201ENST00000261636 RBM19Q9Y4C8 960 aaKnown RBP15.34■□□□□ 0.05
ARL1-201ENST00000261636 DDX10Q13206 875 aaKnown RBP15.34■□□□□ 0.05
ARL1-201ENST00000261636 CEP164Q9UPV0 1460 aa15.32■□□□□ 0.04
ARL1-201ENST00000261636 TRIM52Q96A61 297 aa15.31■□□□□ 0.04
ARL1-201ENST00000261636 HIRIP3Q9BW71 556 aaPredicted RBP15.3■□□□□ 0.04
ARL1-201ENST00000261636 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
ARL1-201ENST00000261636 NEFLP07196 543 aa15.27■□□□□ 0.03
ARL1-201ENST00000261636 KIF21BO75037 1637 aa15.22■□□□□ 0.03
ARL1-201ENST00000261636 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
ARL1-201ENST00000261636 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
ARL1-201ENST00000261636 MSH5O43196 834 aa15.2■□□□□ 0.02
ARL1-201ENST00000261636 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
ARL1-201ENST00000261636 IRX6P78412 446 aaPredicted RBP15.17■□□□□ 0.02
ARL1-201ENST00000261636 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
ARL1-201ENST00000261636 ERICH6Q7L0X2 663 aa15.1■□□□□ 0.01
ARL1-201ENST00000261636 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
ARL1-201ENST00000261636 RAB3GAP2Q9H2M9 1393 aa15.1■□□□□ 0.01
ARL1-201ENST00000261636 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
ARL1-201ENST00000261636 ANP32CO43423 234 aa15.08■□□□□ 0.01
ARL1-201ENST00000261636 PPP1R15AO75807 674 aaPredicted RBP15.07■□□□□ 0
ARL1-201ENST00000261636 ARAP1Q96P48 1450 aa15.05■□□□□ 0
ARL1-201ENST00000261636 FAM50AQ14320 339 aaKnown RBP15.05■□□□□ -0
ARL1-201ENST00000261636 RRBP1Q9P2E9 1410 aaKnown RBP15.04■□□□□ -0
ARL1-201ENST00000261636 CDK11AQ9UQ88 783 aaPredicted RBP15.02□□□□□ -0.01
ARL1-201ENST00000261636 WDR97A6NE52 1622 aa15.01□□□□□ -0.01
ARL1-201ENST00000261636 HNRNPUQ00839 825 aaKnown RBP eCLIP15.01□□□□□ -0.01
ARL1-201ENST00000261636 ATP1B4Q9UN42 357 aaPredicted RBP15□□□□□ -0.01
ARL1-201ENST00000261636 MAPKBP1O60336 1514 aa14.99□□□□□ -0.01
ARL1-201ENST00000261636 CCER2I3L3R5 266 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms