RNA–Protein interactions for RNA: ENST00000549302.1

ARL1-206, Transcript of ADP ribosylation factor like GTPase 1, humanhuman

TSL 3

Gene ARL1, Length 725 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1-206ENST00000549302 AEBP2Q6ZN18 517 aaPredicted RBP31.07■■■□□ 2.56
ARL1-206ENST00000549302 CHIC1Q5VXU3 224 aa30.08■■■□□ 2.41
ARL1-206ENST00000549302 PHF23Q9BUL5 403 aaPredicted RBP26.43■■□□□ 1.82
ARL1-206ENST00000549302 SENP3Q9H4L4 574 aaPredicted RBP26.4■■□□□ 1.82
ARL1-206ENST00000549302 FOXD1Q16676 465 aa24.53■■□□□ 1.52
ARL1-206ENST00000549302 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
ARL1-206ENST00000549302 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
ARL1-206ENST00000549302 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
ARL1-206ENST00000549302 ADRA2BP18089 450 aa23.38■■□□□ 1.33
ARL1-206ENST00000549302 PIAS4Q8N2W9 510 aaPredicted RBP23.08■■□□□ 1.29
ARL1-206ENST00000549302 MSH5O43196 834 aa22.73■■□□□ 1.23
ARL1-206ENST00000549302 ABCC9O60706 1549 aa21.95■■□□□ 1.1
ARL1-206ENST00000549302 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
ARL1-206ENST00000549302 PPP4R3CPQ6ZMV5 832 aa21.4■■□□□ 1.02
ARL1-206ENST00000549302 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
ARL1-206ENST00000549302 MAPK8IP2Q13387 824 aaPredicted RBP21.3■■□□□ 1
ARL1-206ENST00000549302 POTEDQ86YR6 584 aa21.17■□□□□ 0.98
ARL1-206ENST00000549302 DMRT2Q9Y5R5 561 aa21.03■□□□□ 0.96
ARL1-206ENST00000549302 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
ARL1-206ENST00000549302 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
ARL1-206ENST00000549302 NCBP3Q53F19 620 aaKnown RBP20.76■□□□□ 0.91
ARL1-206ENST00000549302 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
ARL1-206ENST00000549302 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
ARL1-206ENST00000549302 KCNA4P22459 653 aa20.6■□□□□ 0.89
ARL1-206ENST00000549302 NACADO15069 1562 aa20.53■□□□□ 0.88
ARL1-206ENST00000549302 RNF216Q9NWF9 866 aaPredicted RBP20.5■□□□□ 0.87
ARL1-206ENST00000549302 HOXD11P31277 338 aaPredicted RBP20.49■□□□□ 0.87
ARL1-206ENST00000549302 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
ARL1-206ENST00000549302 NPM3O75607 178 aaKnown RBP20.45■□□□□ 0.86
ARL1-206ENST00000549302 DCAF8L1A6NGE4 600 aa20.16■□□□□ 0.82
ARL1-206ENST00000549302 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
ARL1-206ENST00000549302 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
ARL1-206ENST00000549302 UNC13AQ9UPW8 1703 aa19.97■□□□□ 0.79
ARL1-206ENST00000549302 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
ARL1-206ENST00000549302 ZCCHC6Q5VYS8 1495 aaKnown RBP19.83■□□□□ 0.76
ARL1-206ENST00000549302 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
ARL1-206ENST00000549302 DCAF1Q9Y4B6 1507 aa19.8■□□□□ 0.76
ARL1-206ENST00000549302 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
ARL1-206ENST00000549302 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
ARL1-206ENST00000549302 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
ARL1-206ENST00000549302 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
ARL1-206ENST00000549302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.721e-6■□□□□ 9.9
ARL1-206ENST00000549302 RNF39Q9H2S5 420 aa19.45■□□□□ 0.7
ARL1-206ENST00000549302 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
ARL1-206ENST00000549302 DNAJC5Q9H3Z4 198 aa19.36■□□□□ 0.69
ARL1-206ENST00000549302 C1QBPQ07021 282 aaKnown RBP19.2■□□□□ 0.66
ARL1-206ENST00000549302 U3KPZ7 1027 aaPredicted RBP19.18■□□□□ 0.66
ARL1-206ENST00000549302 CACNB1Q02641 598 aaPredicted RBP19.16■□□□□ 0.66
ARL1-206ENST00000549302 ERCC6Q03468 1493 aa19.04■□□□□ 0.64
ARL1-206ENST00000549302 FOXD4L1Q9NU39 408 aa19.03■□□□□ 0.64
ARL1-206ENST00000549302 CUX2O14529 1486 aa19.02■□□□□ 0.63
ARL1-206ENST00000549302 NCAPD3P42695 1498 aa19■□□□□ 0.63
ARL1-206ENST00000549302 ZBTB22O15209 634 aa18.95■□□□□ 0.62
ARL1-206ENST00000549302 MYCNP04198 464 aaPredicted RBP18.9■□□□□ 0.62
ARL1-206ENST00000549302 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
ARL1-206ENST00000549302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
ARL1-206ENST00000549302 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
ARL1-206ENST00000549302 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
ARL1-206ENST00000549302 SAMD1Q6SPF0 538 aaPredicted RBP18.78■□□□□ 0.6
ARL1-206ENST00000549302 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
ARL1-206ENST00000549302 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
ARL1-206ENST00000549302 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
ARL1-206ENST00000549302 NESP48681 1621 aa18.73■□□□□ 0.59
ARL1-206ENST00000549302 APLP2Q06481 763 aa18.72■□□□□ 0.59
ARL1-206ENST00000549302 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
ARL1-206ENST00000549302 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
ARL1-206ENST00000549302 CAPN15O75808 1086 aa18.68■□□□□ 0.58
ARL1-206ENST00000549302 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
ARL1-206ENST00000549302 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
ARL1-206ENST00000549302 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
ARL1-206ENST00000549302 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
ARL1-206ENST00000549302 TRHP20396 242 aaPredicted RBP18.54■□□□□ 0.56
ARL1-206ENST00000549302 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
ARL1-206ENST00000549302 ZNF219Q9P2Y4 722 aaPredicted RBP18.51■□□□□ 0.55
ARL1-206ENST00000549302 MROH2BQ7Z745 1585 aa18.48■□□□□ 0.55
ARL1-206ENST00000549302 THOC2Q8NI27 1593 aaKnown RBP18.48■□□□□ 0.55
ARL1-206ENST00000549302 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
ARL1-206ENST00000549302 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
ARL1-206ENST00000549302 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
ARL1-206ENST00000549302 DSG3P32926 999 aa18.42■□□□□ 0.54
ARL1-206ENST00000549302 ATXN8OSP0DMR3 200 aa18.39■□□□□ 0.53
ARL1-206ENST00000549302 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
ARL1-206ENST00000549302 KIF21AQ7Z4S6 1674 aa18.33■□□□□ 0.52
ARL1-206ENST00000549302 ABCB7O75027 752 aa18.31■□□□□ 0.52
ARL1-206ENST00000549302 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
ARL1-206ENST00000549302 WDR62O43379 1518 aa18.26■□□□□ 0.51
ARL1-206ENST00000549302 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
ARL1-206ENST00000549302 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
ARL1-206ENST00000549302 WIZO95785 1651 aa18.18■□□□□ 0.5
ARL1-206ENST00000549302 POLA2Q14181 598 aa18.16■□□□□ 0.5
ARL1-206ENST00000549302 CFTRP13569 1480 aa18.14■□□□□ 0.5
ARL1-206ENST00000549302 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
ARL1-206ENST00000549302 URB2Q14146 1524 aaKnown RBP18.02■□□□□ 0.47
ARL1-206ENST00000549302 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
ARL1-206ENST00000549302 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
ARL1-206ENST00000549302 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
ARL1-206ENST00000549302 CCDC88BA6NC98 1476 aa17.85■□□□□ 0.45
ARL1-206ENST00000549302 ZBTB12Q9Y330 459 aaPredicted RBP17.84■□□□□ 0.45
ARL1-206ENST00000549302 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.44
ARL1-206ENST00000549302 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms