RNA–Protein interactions for RNA: ENST00000525054.1

EIF3M-204, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 2

Gene EIF3M, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-204ENST00000525054 AEBP2Q6ZN18 517 aaPredicted RBP28.06■■■□□ 2.08
EIF3M-204ENST00000525054 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
EIF3M-204ENST00000525054 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
EIF3M-204ENST00000525054 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
EIF3M-204ENST00000525054 PLPPR3Q6T4P5 718 aa22.19■■□□□ 1.14
EIF3M-204ENST00000525054 FOXD1Q16676 465 aa22.05■■□□□ 1.12
EIF3M-204ENST00000525054 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
EIF3M-204ENST00000525054 ADRA2BP18089 450 aa21.28■■□□□ 1
EIF3M-204ENST00000525054 PIAS4Q8N2W9 510 aaPredicted RBP20.77■□□□□ 0.92
EIF3M-204ENST00000525054 MSH5O43196 834 aa20.18■□□□□ 0.82
EIF3M-204ENST00000525054 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
EIF3M-204ENST00000525054 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
EIF3M-204ENST00000525054 KCNA4P22459 653 aa19.29■□□□□ 0.68
EIF3M-204ENST00000525054 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
EIF3M-204ENST00000525054 POTEDQ86YR6 584 aa19.2■□□□□ 0.66
EIF3M-204ENST00000525054 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
EIF3M-204ENST00000525054 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
EIF3M-204ENST00000525054 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
EIF3M-204ENST00000525054 NPM3O75607 178 aaKnown RBP18.87■□□□□ 0.61
EIF3M-204ENST00000525054 RNF216Q9NWF9 866 aaPredicted RBP18.61■□□□□ 0.57
EIF3M-204ENST00000525054 HOXD11P31277 338 aaPredicted RBP18.55■□□□□ 0.56
EIF3M-204ENST00000525054 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
EIF3M-204ENST00000525054 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
EIF3M-204ENST00000525054 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
EIF3M-204ENST00000525054 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
EIF3M-204ENST00000525054 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
EIF3M-204ENST00000525054 ZBTB22O15209 634 aa17.8■□□□□ 0.44
EIF3M-204ENST00000525054 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
EIF3M-204ENST00000525054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
EIF3M-204ENST00000525054 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
EIF3M-204ENST00000525054 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
EIF3M-204ENST00000525054 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
EIF3M-204ENST00000525054 RNF39Q9H2S5 420 aa17.36■□□□□ 0.37
EIF3M-204ENST00000525054 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
EIF3M-204ENST00000525054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.08■□□□□ 0.32
EIF3M-204ENST00000525054 HNRNPUL2Q1KMD3 747 aaKnown RBP17.08■□□□□ 0.32
EIF3M-204ENST00000525054 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
EIF3M-204ENST00000525054 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
EIF3M-204ENST00000525054 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
EIF3M-204ENST00000525054 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
EIF3M-204ENST00000525054 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
EIF3M-204ENST00000525054 APLP2Q06481 763 aa16.86■□□□□ 0.29
EIF3M-204ENST00000525054 CAPN15O75808 1086 aa16.85■□□□□ 0.29
EIF3M-204ENST00000525054 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
EIF3M-204ENST00000525054 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
EIF3M-204ENST00000525054 ABCB7O75027 752 aa16.6■□□□□ 0.25
EIF3M-204ENST00000525054 DSG3P32926 999 aa16.57■□□□□ 0.24
EIF3M-204ENST00000525054 POLA2Q14181 598 aa16.53■□□□□ 0.24
EIF3M-204ENST00000525054 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
EIF3M-204ENST00000525054 FBLN2P98095 1184 aa16.14■□□□□ 0.17
EIF3M-204ENST00000525054 ZBTB12Q9Y330 459 aaPredicted RBP16.13■□□□□ 0.17
EIF3M-204ENST00000525054 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
EIF3M-204ENST00000525054 FKBP8Q14318 412 aa15.97■□□□□ 0.15
EIF3M-204ENST00000525054 SPDYE4A6NLX3 237 aa15.85■□□□□ 0.13
EIF3M-204ENST00000525054 SPDYE2BA6NHP3 402 aa15.76■□□□□ 0.11
EIF3M-204ENST00000525054 SPDYE6P0CI01 402 aa15.76■□□□□ 0.11
EIF3M-204ENST00000525054 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
EIF3M-204ENST00000525054 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
EIF3M-204ENST00000525054 SSUH2Q9Y2M2 353 aa15.7■□□□□ 0.1
EIF3M-204ENST00000525054 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
EIF3M-204ENST00000525054 PROM2Q8N271 834 aa15.61■□□□□ 0.09
EIF3M-204ENST00000525054 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
EIF3M-204ENST00000525054 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
EIF3M-204ENST00000525054 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
EIF3M-204ENST00000525054 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
EIF3M-204ENST00000525054 SPDYE1Q8NFV5 336 aaPredicted RBP15.28■□□□□ 0.04
EIF3M-204ENST00000525054 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
EIF3M-204ENST00000525054 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
EIF3M-204ENST00000525054 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
EIF3M-204ENST00000525054 VASPP50552 380 aaPredicted RBP15.15■□□□□ 0.02
EIF3M-204ENST00000525054 PRR29P0C7W0 189 aa15.1■□□□□ 0.01
EIF3M-204ENST00000525054 CHRDL2Q6WN34 429 aa15.07■□□□□ 0
EIF3M-204ENST00000525054 POTEHQ6S545 545 aa15.02■□□□□ -0
EIF3M-204ENST00000525054 MIER1Q8N108 512 aa15.01□□□□□ -0.01
EIF3M-204ENST00000525054 IFNLR1Q8IU57 520 aaPredicted RBP14.99□□□□□ -0.01
EIF3M-204ENST00000525054 PLCD3Q8N3E9 789 aa14.99□□□□□ -0.01
EIF3M-204ENST00000525054 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
EIF3M-204ENST00000525054 CHADLQ6NUI6 762 aa14.97□□□□□ -0.01
EIF3M-204ENST00000525054 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
EIF3M-204ENST00000525054 PIP4P2Q8N4L2 257 aa14.94□□□□□ -0.02
EIF3M-204ENST00000525054 PRKAR2AP13861 404 aaKnown RBP14.89□□□□□ -0.03
EIF3M-204ENST00000525054 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
EIF3M-204ENST00000525054 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
EIF3M-204ENST00000525054 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
EIF3M-204ENST00000525054 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
EIF3M-204ENST00000525054 SPOCK2Q92563 424 aa14.72□□□□□ -0.05
EIF3M-204ENST00000525054 ZBTB47Q9UFB7 747 aaPredicted RBP14.72□□□□□ -0.05
EIF3M-204ENST00000525054 NUBP1P53384 320 aa14.67□□□□□ -0.06
EIF3M-204ENST00000525054 RTN4Q9NQC3 1192 aaKnown RBP14.65□□□□□ -0.06
EIF3M-204ENST00000525054 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
EIF3M-204ENST00000525054 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
EIF3M-204ENST00000525054 AMER1Q5JTC6 1135 aaPredicted RBP14.57□□□□□ -0.08
EIF3M-204ENST00000525054 CIZ1Q9ULV3 898 aaPredicted RBP14.52□□□□□ -0.09
EIF3M-204ENST00000525054 PKD2Q13563 968 aa14.51□□□□□ -0.09
EIF3M-204ENST00000525054 TSPYL2Q9H2G4 693 aaPredicted RBP14.51□□□□□ -0.09
EIF3M-204ENST00000525054 DCAF8Q5TAQ9 597 aa14.49□□□□□ -0.09
EIF3M-204ENST00000525054 FAM212AQ96EL1 285 aa14.48□□□□□ -0.09
EIF3M-204ENST00000525054 C19orf67A6NJJ6 358 aa14.45□□□□□ -0.1
EIF3M-204ENST00000525054 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
EIF3M-204ENST00000525054 GSE1Q14687 1217 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms