RNA–Protein interactions for RNA: ENST00000526267.1

EIF3M-206, Transcript of eukaryotic translation initiation factor 3 subunit M, human

TSL 2

Gene EIF3M, Length 662 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3M-206	ENST00000526267	AEBP2	Q6ZN18	517 aa	Predicted RBP	21.98	■■□□□ 1.11
EIF3M-206	ENST00000526267	CHIC1	Q5VXU3	224 aa		21.57	■■□□□ 1.04
EIF3M-206	ENST00000526267	PHF23	Q9BUL5	403 aa	Predicted RBP	19.07	■□□□□ 0.64
EIF3M-206	ENST00000526267	SENP3	Q9H4L4	574 aa	Predicted RBP	18.79	■□□□□ 0.6
EIF3M-206	ENST00000526267	PLPPR3	Q6T4P5	718 aa		17.65	■□□□□ 0.42
EIF3M-206	ENST00000526267	FOXD1	Q16676	465 aa		17.47	■□□□□ 0.39
EIF3M-206	ENST00000526267	ADRA2B	P18089	450 aa		16.74	■□□□□ 0.27
EIF3M-206	ENST00000526267	PPP6R1	Q9UPN7	881 aa		16.73	■□□□□ 0.27
EIF3M-206	ENST00000526267	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.4	■□□□□ 0.22
EIF3M-206	ENST00000526267	MSH5	O43196	834 aa		16.33	■□□□□ 0.2
EIF3M-206	ENST00000526267	KCNA4	P22459	653 aa		15.7	■□□□□ 0.1
EIF3M-206	ENST00000526267	POTED	Q86YR6	584 aa		15.66	■□□□□ 0.1
EIF3M-206	ENST00000526267	PPP4R3CP	Q6ZMV5	832 aa		15.64	■□□□□ 0.09
EIF3M-206	ENST00000526267	NCBP3	Q53F19	620 aa	Known RBP	15.27	■□□□□ 0.04
EIF3M-206	ENST00000526267	SCAF1	Q9H7N4	1312 aa	Known RBP	15.2	■□□□□ 0.02
EIF3M-206	ENST00000526267	NPM3	O75607	178 aa	Known RBP	15.11	■□□□□ 0.01
EIF3M-206	ENST00000526267	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.1	■□□□□ 0.01
EIF3M-206	ENST00000526267	CNKSR2	Q8WXI2	1034 aa		15.09	■□□□□ 0.01
EIF3M-206	ENST00000526267	EHMT2	Q96KQ7	1210 aa		15.01	□□□□□ -0.01
EIF3M-206	ENST00000526267	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.97	□□□□□ -0.01
EIF3M-206	ENST00000526267	DMRT2	Q9Y5R5	561 aa		14.9	□□□□□ -0.02
EIF3M-206	ENST00000526267	RNF216	Q9NWF9	866 aa	Predicted RBP	14.7	□□□□□ -0.06
EIF3M-206	ENST00000526267	CSRNP3	Q8WYN3	585 aa		14.64	□□□□□ -0.07
EIF3M-206	ENST00000526267	HOXD11	P31277	338 aa	Predicted RBP	14.55	□□□□□ -0.08
EIF3M-206	ENST00000526267	DNAJC5B	Q9UF47	199 aa		14.49	□□□□□ -0.09
EIF3M-206	ENST00000526267	ZBTB22	O15209	634 aa		14.46	□□□□□ -0.09
EIF3M-206	ENST00000526267	DCAF8L1	A6NGE4	600 aa		14.38	□□□□□ -0.11
EIF3M-206	ENST00000526267	FOXD4L1	Q9NU39	408 aa		14.29	□□□□□ -0.12
EIF3M-206	ENST00000526267	SLC4A2	P04920	1241 aa		14.19	□□□□□ -0.14
EIF3M-206	ENST00000526267	CACNB1	Q02641	598 aa	Predicted RBP	13.96	□□□□□ -0.17
EIF3M-206	ENST00000526267	MYCN	P04198	464 aa	Predicted RBP	13.91	□□□□□ -0.18
EIF3M-206	ENST00000526267	RNF39	Q9H2S5	420 aa		13.91	□□□□□ -0.18
EIF3M-206	ENST00000526267	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	2e-7	■■□□□ 13.4
EIF3M-206	ENST00000526267	C1QBP	Q07021	282 aa	Known RBP	13.75	□□□□□ -0.21
EIF3M-206	ENST00000526267		U3KPZ7	1027 aa	Predicted RBP	13.73	□□□□□ -0.21
EIF3M-206	ENST00000526267	ATXN8OS	P0DMR3	200 aa		13.71	□□□□□ -0.21
EIF3M-206	ENST00000526267	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.6	□□□□□ -0.23
EIF3M-206	ENST00000526267	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.58	□□□□□ -0.24
EIF3M-206	ENST00000526267	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.58	□□□□□ -0.24
EIF3M-206	ENST00000526267	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.57	□□□□□ -0.24
EIF3M-206	ENST00000526267	APLP2	Q06481	763 aa		13.33	□□□□□ -0.28
EIF3M-206	ENST00000526267	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.29	□□□□□ -0.28
EIF3M-206	ENST00000526267	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.28	□□□□□ -0.28
EIF3M-206	ENST00000526267	CAPN15	O75808	1086 aa		13.26	□□□□□ -0.29
EIF3M-206	ENST00000526267	TRH	P20396	242 aa	Predicted RBP	13.22	□□□□□ -0.29
EIF3M-206	ENST00000526267	FKBP8	Q14318	412 aa		13.22	□□□□□ -0.29
EIF3M-206	ENST00000526267	DSG3	P32926	999 aa		13.08	□□□□□ -0.32
EIF3M-206	ENST00000526267	POLA2	Q14181	598 aa		13.07	□□□□□ -0.32
EIF3M-206	ENST00000526267	ABCB7	O75027	752 aa		13	□□□□□ -0.33
EIF3M-206	ENST00000526267	MKRN4P	Q13434	485 aa	Predicted RBP	13	□□□□□ -0.33
EIF3M-206	ENST00000526267	FBLN2	P98095	1184 aa		12.92	□□□□□ -0.34
EIF3M-206	ENST00000526267	SPDYE4	A6NLX3	237 aa		12.85	□□□□□ -0.35
EIF3M-206	ENST00000526267	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.78	□□□□□ -0.36
EIF3M-206	ENST00000526267	PROM2	Q8N271	834 aa		12.64	□□□□□ -0.39
EIF3M-206	ENST00000526267	RTN4	Q9NQC3	1192 aa	Known RBP	12.64	□□□□□ -0.39
EIF3M-206	ENST00000526267	OSCAR	Q8IYS5	282 aa		12.61	□□□□□ -0.39
EIF3M-206	ENST00000526267	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.59	□□□□□ -0.39
EIF3M-206	ENST00000526267	FBXO3	Q9UK99	471 aa		12.57	□□□□□ -0.4
EIF3M-206	ENST00000526267	ZNF692	Q9BU19	519 aa	Predicted RBP	12.55	□□□□□ -0.4
EIF3M-206	ENST00000526267	RBM42	Q9BTD8	480 aa	Known RBP	12.53	□□□□□ -0.4
EIF3M-206	ENST00000526267	SPDYE2B	A6NHP3	402 aa		12.5	□□□□□ -0.41
EIF3M-206	ENST00000526267	SPDYE6	P0CI01	402 aa		12.5	□□□□□ -0.41
EIF3M-206	ENST00000526267	SPDYE2	Q495Y8	402 aa		12.5	□□□□□ -0.41
EIF3M-206	ENST00000526267	SSUH2	Q9Y2M2	353 aa		12.45	□□□□□ -0.42
EIF3M-206	ENST00000526267	VASP	P50552	380 aa	Predicted RBP	12.44	□□□□□ -0.42
EIF3M-206	ENST00000526267	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
EIF3M-206	ENST00000526267	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.33	□□□□□ -0.44
EIF3M-206	ENST00000526267	POTEH	Q6S545	545 aa		12.32	□□□□□ -0.44
EIF3M-206	ENST00000526267	AKT1S1	Q96B36	256 aa		12.25	□□□□□ -0.45
EIF3M-206	ENST00000526267	STAG3	Q9UJ98	1225 aa		12.25	□□□□□ -0.45
EIF3M-206	ENST00000526267	PLCD3	Q8N3E9	789 aa		12.18	□□□□□ -0.46
EIF3M-206	ENST00000526267	CHRDL2	Q6WN34	429 aa		12.17	□□□□□ -0.46
EIF3M-206	ENST00000526267	MIER1	Q8N108	512 aa		12.17	□□□□□ -0.46
EIF3M-206	ENST00000526267	KLHL34	Q8N239	644 aa		12.17	□□□□□ -0.46
EIF3M-206	ENST00000526267	REM2	Q8IYK8	340 aa	Predicted RBP	12.13	□□□□□ -0.47
EIF3M-206	ENST00000526267	SPOCK2	Q92563	424 aa		12.08	□□□□□ -0.48
EIF3M-206	ENST00000526267	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.06	□□□□□ -0.48
EIF3M-206	ENST00000526267	CLEC11A	Q9Y240	323 aa		12.06	□□□□□ -0.48
EIF3M-206	ENST00000526267	PKD2	Q13563	968 aa		12.04	□□□□□ -0.48
EIF3M-206	ENST00000526267	PLEKHG5	O94827	1062 aa		12.01	□□□□□ -0.49
EIF3M-206	ENST00000526267	PITPNM1	O00562	1244 aa		11.99	□□□□□ -0.49
EIF3M-206	ENST00000526267	PRR29	P0C7W0	189 aa		11.96	□□□□□ -0.49
EIF3M-206	ENST00000526267	SLC24A1	O60721	1099 aa		11.94	□□□□□ -0.5
EIF3M-206	ENST00000526267	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.94	□□□□□ -0.5
EIF3M-206	ENST00000526267	DCAF8L2	P0C7V8	631 aa		11.93	□□□□□ -0.5
EIF3M-206	ENST00000526267	ECM2	O94769	699 aa	Predicted RBP	11.9	□□□□□ -0.5
EIF3M-206	ENST00000526267	PIP4P2	Q8N4L2	257 aa		11.9	□□□□□ -0.5
EIF3M-206	ENST00000526267	CREBZF	Q9NS37	354 aa		11.89	□□□□□ -0.51
EIF3M-206	ENST00000526267	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.89	□□□□□ -0.51
EIF3M-206	ENST00000526267	FXR2	P51116	673 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
EIF3M-206	ENST00000526267	MNX1	P50219	401 aa	Predicted RBP	11.81	□□□□□ -0.52
EIF3M-206	ENST00000526267	NUBP1	P53384	320 aa		11.8	□□□□□ -0.52
EIF3M-206	ENST00000526267	RGL2	O15211	777 aa		11.79	□□□□□ -0.52
EIF3M-206	ENST00000526267	DCAF8	Q5TAQ9	597 aa		11.74	□□□□□ -0.53
EIF3M-206	ENST00000526267	CHADL	Q6NUI6	762 aa		11.74	□□□□□ -0.53
EIF3M-206	ENST00000526267	GSE1	Q14687	1217 aa		11.72	□□□□□ -0.53
EIF3M-206	ENST00000526267	HAX1	O00165	279 aa		11.71	□□□□□ -0.53
EIF3M-206	ENST00000526267	PRKAR2A	P13861	404 aa	Known RBP	11.71	□□□□□ -0.53
EIF3M-206	ENST00000526267	RASEF	Q8IZ41	740 aa		11.7	□□□□□ -0.54
EIF3M-206	ENST00000526267	NPM1	P06748	294 aa	Known RBP eCLIP	11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms