RNA–Protein interactions for RNA: ENST00000532755.5

CAPRIN1-211, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-211ENST00000532755 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
CAPRIN1-211ENST00000532755 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
CAPRIN1-211ENST00000532755 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
CAPRIN1-211ENST00000532755 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
CAPRIN1-211ENST00000532755 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
CAPRIN1-211ENST00000532755 FOXD1Q16676 465 aa16.83■□□□□ 0.28
CAPRIN1-211ENST00000532755 ADRA2BP18089 450 aa16.58■□□□□ 0.24
CAPRIN1-211ENST00000532755 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
CAPRIN1-211ENST00000532755 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
CAPRIN1-211ENST00000532755 KCNA4P22459 653 aa15.79■□□□□ 0.12
CAPRIN1-211ENST00000532755 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
CAPRIN1-211ENST00000532755 MSH5O43196 834 aa15.35■□□□□ 0.05
CAPRIN1-211ENST00000532755 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
CAPRIN1-211ENST00000532755 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
CAPRIN1-211ENST00000532755 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
CAPRIN1-211ENST00000532755 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
CAPRIN1-211ENST00000532755 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
CAPRIN1-211ENST00000532755 POTEDQ86YR6 584 aa15.11■□□□□ 0.01
CAPRIN1-211ENST00000532755 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
CAPRIN1-211ENST00000532755 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
CAPRIN1-211ENST00000532755 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
CAPRIN1-211ENST00000532755 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
CAPRIN1-211ENST00000532755 DMRT2Q9Y5R5 561 aa14.6□□□□□ -0.07
CAPRIN1-211ENST00000532755 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
CAPRIN1-211ENST00000532755 ZBTB22O15209 634 aa14.52□□□□□ -0.09
CAPRIN1-211ENST00000532755 HOXD11P31277 338 aaPredicted RBP14.46□□□□□ -0.09
CAPRIN1-211ENST00000532755 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
CAPRIN1-211ENST00000532755 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
CAPRIN1-211ENST00000532755 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
CAPRIN1-211ENST00000532755 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
CAPRIN1-211ENST00000532755 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
CAPRIN1-211ENST00000532755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.21e-6■□□□□ 9.6
CAPRIN1-211ENST00000532755 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-211ENST00000532755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
CAPRIN1-211ENST00000532755 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
CAPRIN1-211ENST00000532755 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
CAPRIN1-211ENST00000532755 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
CAPRIN1-211ENST00000532755 FKBP8Q14318 412 aa13.4□□□□□ -0.26
CAPRIN1-211ENST00000532755 APLP2Q06481 763 aa13.38□□□□□ -0.27
CAPRIN1-211ENST00000532755 ZNF219Q9P2Y4 722 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-211ENST00000532755 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
CAPRIN1-211ENST00000532755 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
CAPRIN1-211ENST00000532755 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CAPRIN1-211ENST00000532755 CAPN15O75808 1086 aa13.07□□□□□ -0.32
CAPRIN1-211ENST00000532755 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-211ENST00000532755 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
CAPRIN1-211ENST00000532755 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
CAPRIN1-211ENST00000532755 POLA2Q14181 598 aa12.99□□□□□ -0.33
CAPRIN1-211ENST00000532755 FBLN2P98095 1184 aa12.98□□□□□ -0.33
CAPRIN1-211ENST00000532755 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
CAPRIN1-211ENST00000532755 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
CAPRIN1-211ENST00000532755 ABCB7O75027 752 aa12.87□□□□□ -0.35
CAPRIN1-211ENST00000532755 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-211ENST00000532755 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
CAPRIN1-211ENST00000532755 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
CAPRIN1-211ENST00000532755 PROM2Q8N271 834 aa12.74□□□□□ -0.37
CAPRIN1-211ENST00000532755 DSG3P32926 999 aa12.71□□□□□ -0.37
CAPRIN1-211ENST00000532755 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
CAPRIN1-211ENST00000532755 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
CAPRIN1-211ENST00000532755 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
CAPRIN1-211ENST00000532755 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
CAPRIN1-211ENST00000532755 SPDYE2BA6NHP3 402 aa12.49□□□□□ -0.41
CAPRIN1-211ENST00000532755 SPDYE6P0CI01 402 aa12.49□□□□□ -0.41
CAPRIN1-211ENST00000532755 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
CAPRIN1-211ENST00000532755 SSUH2Q9Y2M2 353 aa12.45□□□□□ -0.42
CAPRIN1-211ENST00000532755 IFNLR1Q8IU57 520 aaPredicted RBP12.44□□□□□ -0.42
CAPRIN1-211ENST00000532755 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
CAPRIN1-211ENST00000532755 STAG3Q9UJ98 1225 aa12.34□□□□□ -0.43
CAPRIN1-211ENST00000532755 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
CAPRIN1-211ENST00000532755 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
CAPRIN1-211ENST00000532755 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
CAPRIN1-211ENST00000532755 MIER1Q8N108 512 aa12.21□□□□□ -0.45
CAPRIN1-211ENST00000532755 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
CAPRIN1-211ENST00000532755 PKD2Q13563 968 aa12.2□□□□□ -0.46
CAPRIN1-211ENST00000532755 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
CAPRIN1-211ENST00000532755 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-211ENST00000532755 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
CAPRIN1-211ENST00000532755 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
CAPRIN1-211ENST00000532755 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
CAPRIN1-211ENST00000532755 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
CAPRIN1-211ENST00000532755 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
CAPRIN1-211ENST00000532755 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
CAPRIN1-211ENST00000532755 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
CAPRIN1-211ENST00000532755 RGL2O15211 777 aa11.94□□□□□ -0.5
CAPRIN1-211ENST00000532755 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
CAPRIN1-211ENST00000532755 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
CAPRIN1-211ENST00000532755 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-211ENST00000532755 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
CAPRIN1-211ENST00000532755 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
CAPRIN1-211ENST00000532755 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAPRIN1-211ENST00000532755 GSE1Q14687 1217 aa11.84□□□□□ -0.51
CAPRIN1-211ENST00000532755 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-211ENST00000532755 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-211ENST00000532755 NUBP1P53384 320 aa11.83□□□□□ -0.52
CAPRIN1-211ENST00000532755 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
CAPRIN1-211ENST00000532755 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
CAPRIN1-211ENST00000532755 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
CAPRIN1-211ENST00000532755 POTEHQ6S545 545 aa11.77□□□□□ -0.53
CAPRIN1-211ENST00000532755 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
CAPRIN1-211ENST00000532755 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms