RNA–Protein interactions for RNA: ENST00000551987.1

TMPO-210, Transcript of thymopoietin, humanhuman

TSL 2

Gene TMPO, Length 727 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-210ENST00000551987 AEBP2Q6ZN18 517 aaPredicted RBP32.67■■■□□ 2.82
TMPO-210ENST00000551987 CHIC1Q5VXU3 224 aa31.32■■■□□ 2.6
TMPO-210ENST00000551987 SENP3Q9H4L4 574 aaPredicted RBP27.8■■■□□ 2.04
TMPO-210ENST00000551987 PHF23Q9BUL5 403 aaPredicted RBP27.51■■□□□ 1.99
TMPO-210ENST00000551987 FOXD1Q16676 465 aa25.89■■□□□ 1.74
TMPO-210ENST00000551987 PLPPR3Q6T4P5 718 aa25.19■■□□□ 1.62
TMPO-210ENST00000551987 PPP6R1Q9UPN7 881 aa24.48■■□□□ 1.51
TMPO-210ENST00000551987 ADRA2BP18089 450 aa24.44■■□□□ 1.5
TMPO-210ENST00000551987 PIAS4Q8N2W9 510 aaPredicted RBP24.31■■□□□ 1.48
TMPO-210ENST00000551987 MSH5O43196 834 aa24.09■■□□□ 1.45
TMPO-210ENST00000551987 POTEDQ86YR6 584 aa22.98■■□□□ 1.27
TMPO-210ENST00000551987 MAPK8IP2Q13387 824 aaPredicted RBP22.35■■□□□ 1.17
TMPO-210ENST00000551987 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
TMPO-210ENST00000551987 PPP4R3CPQ6ZMV5 832 aa22.14■■□□□ 1.13
TMPO-210ENST00000551987 DMRT2Q9Y5R5 561 aa22.1■■□□□ 1.13
TMPO-210ENST00000551987 CNKSR2Q8WXI2 1034 aa21.63■■□□□ 1.05
TMPO-210ENST00000551987 HOXD11P31277 338 aaPredicted RBP21.39■■□□□ 1.01
TMPO-210ENST00000551987 NCBP3Q53F19 620 aaKnown RBP21.38■■□□□ 1.01
TMPO-210ENST00000551987 RNF216Q9NWF9 866 aaPredicted RBP21.34■■□□□ 1.01
TMPO-210ENST00000551987 DCAF8L1A6NGE4 600 aa21.28■■□□□ 1
TMPO-210ENST00000551987 NPM3O75607 178 aaKnown RBP21.08■□□□□ 0.97
TMPO-210ENST00000551987 KCNA4P22459 653 aa20.98■□□□□ 0.95
TMPO-210ENST00000551987 RNF39Q9H2S5 420 aa20.58■□□□□ 0.89
TMPO-210ENST00000551987 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
TMPO-210ENST00000551987 CACNB1Q02641 598 aaPredicted RBP20.51■□□□□ 0.87
TMPO-210ENST00000551987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.871e-7■□□□□ 11
TMPO-210ENST00000551987 C1QBPQ07021 282 aaKnown RBP20.3■□□□□ 0.84
TMPO-210ENST00000551987 SLC4A2P04920 1241 aa20.03■□□□□ 0.8
TMPO-210ENST00000551987 U3KPZ7 1027 aaPredicted RBP20.03■□□□□ 0.8
TMPO-210ENST00000551987 SLC4A1APQ9BWU0 796 aaKnown RBP19.88■□□□□ 0.77
TMPO-210ENST00000551987 SPINK5Q9NQ38 1064 aaPredicted RBP19.67■□□□□ 0.74
TMPO-210ENST00000551987 CAPN15O75808 1086 aa19.64■□□□□ 0.73
TMPO-210ENST00000551987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.56■□□□□ 0.72
TMPO-210ENST00000551987 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
TMPO-210ENST00000551987 APLP2Q06481 763 aa19.49■□□□□ 0.71
TMPO-210ENST00000551987 MYCNP04198 464 aaPredicted RBP19.48■□□□□ 0.71
TMPO-210ENST00000551987 SAMD1Q6SPF0 538 aaPredicted RBP19.47■□□□□ 0.71
TMPO-210ENST00000551987 FOXD4L1Q9NU39 408 aa19.46■□□□□ 0.71
TMPO-210ENST00000551987 TRHP20396 242 aaPredicted RBP19.41■□□□□ 0.7
TMPO-210ENST00000551987 DSG3P32926 999 aa19.4■□□□□ 0.7
TMPO-210ENST00000551987 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
TMPO-210ENST00000551987 ZBTB22O15209 634 aa19.29■□□□□ 0.68
TMPO-210ENST00000551987 ABCB7O75027 752 aa19.23■□□□□ 0.67
TMPO-210ENST00000551987 ATF5Q9Y2D1 282 aaPredicted RBP19.03■□□□□ 0.64
TMPO-210ENST00000551987 POLA2Q14181 598 aa18.94■□□□□ 0.62
TMPO-210ENST00000551987 ATXN8OSP0DMR3 200 aa18.79■□□□□ 0.6
TMPO-210ENST00000551987 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
TMPO-210ENST00000551987 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
TMPO-210ENST00000551987 ZBTB12Q9Y330 459 aaPredicted RBP18.54■□□□□ 0.56
TMPO-210ENST00000551987 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
TMPO-210ENST00000551987 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
TMPO-210ENST00000551987 FBLN2P98095 1184 aa18.26■□□□□ 0.51
TMPO-210ENST00000551987 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
TMPO-210ENST00000551987 AKT1S1Q96B36 256 aa18.14■□□□□ 0.49
TMPO-210ENST00000551987 POTEHQ6S545 545 aa18.08■□□□□ 0.48
TMPO-210ENST00000551987 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
TMPO-210ENST00000551987 SPDYE6P0CI01 402 aa18■□□□□ 0.47
TMPO-210ENST00000551987 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
TMPO-210ENST00000551987 REM2Q8IYK8 340 aaPredicted RBP17.99■□□□□ 0.47
TMPO-210ENST00000551987 CHRDL2Q6WN34 429 aa17.98■□□□□ 0.47
TMPO-210ENST00000551987 ZNF692Q9BU19 519 aaPredicted RBP17.88■□□□□ 0.45
TMPO-210ENST00000551987 PITPNM1O00562 1244 aa17.8■□□□□ 0.44
TMPO-210ENST00000551987 SSUH2Q9Y2M2 353 aa17.78■□□□□ 0.44
TMPO-210ENST00000551987 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
TMPO-210ENST00000551987 PIP4P2Q8N4L2 257 aa17.63■□□□□ 0.41
TMPO-210ENST00000551987 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
TMPO-210ENST00000551987 SPDYE1Q8NFV5 336 aaPredicted RBP17.62■□□□□ 0.41
TMPO-210ENST00000551987 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
TMPO-210ENST00000551987 SPDYE4A6NLX3 237 aa17.49■□□□□ 0.39
TMPO-210ENST00000551987 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
TMPO-210ENST00000551987 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
TMPO-210ENST00000551987 CHADLQ6NUI6 762 aa17.25■□□□□ 0.35
TMPO-210ENST00000551987 HAX1O00165 279 aa17.24■□□□□ 0.35
TMPO-210ENST00000551987 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
TMPO-210ENST00000551987 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
TMPO-210ENST00000551987 EVX2Q03828 476 aa17.04■□□□□ 0.32
TMPO-210ENST00000551987 PROM2Q8N271 834 aa17.04■□□□□ 0.32
TMPO-210ENST00000551987 FARP1Q9Y4F1 1045 aaPredicted RBP16.99■□□□□ 0.31
TMPO-210ENST00000551987 C19orf67A6NJJ6 358 aa16.98■□□□□ 0.31
TMPO-210ENST00000551987 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
TMPO-210ENST00000551987 FKBP8Q14318 412 aa16.97■□□□□ 0.31
TMPO-210ENST00000551987 CD44P16070 742 aaKnown RBP16.82■□□□□ 0.28
TMPO-210ENST00000551987 MNX1P50219 401 aaPredicted RBP16.71■□□□□ 0.27
TMPO-210ENST00000551987 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMPO-210ENST00000551987 GABBR2O75899 941 aa16.67■□□□□ 0.26
TMPO-210ENST00000551987 MIER1Q8N108 512 aa16.67■□□□□ 0.26
TMPO-210ENST00000551987 ZRANB1Q9UGI0 708 aa16.65■□□□□ 0.26
TMPO-210ENST00000551987 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
TMPO-210ENST00000551987 PLCD3Q8N3E9 789 aa16.58■□□□□ 0.24
TMPO-210ENST00000551987 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
TMPO-210ENST00000551987 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
TMPO-210ENST00000551987 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
TMPO-210ENST00000551987 CLCN6P51797 869 aa16.45■□□□□ 0.22
TMPO-210ENST00000551987 PHF12Q96QT6 1004 aa16.45■□□□□ 0.22
TMPO-210ENST00000551987 TSPYL2Q9H2G4 693 aaPredicted RBP16.44■□□□□ 0.22
TMPO-210ENST00000551987 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
TMPO-210ENST00000551987 GALR2O43603 387 aaPredicted RBP16.36■□□□□ 0.21
TMPO-210ENST00000551987 RASEFQ8IZ41 740 aa16.34■□□□□ 0.21
TMPO-210ENST00000551987 DCBLD2Q96PD2 775 aa16.31■□□□□ 0.2
TMPO-210ENST00000551987 POTEIP0CG38 1075 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms