RNA–Protein interactions for RNA: ENST00000506506.5

ABCE1-206, Transcript of ATP binding cassette subfamily E member 1, humanhuman

TSL 3

Gene ABCE1, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-206ENST00000506506 NISCHQ9Y2I1 1504 aa21.99■■□□□ 1.11
ABCE1-206ENST00000506506 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
ABCE1-206ENST00000506506 ABCC9O60706 1549 aa18.8■□□□□ 0.6
ABCE1-206ENST00000506506 ZCCHC6Q5VYS8 1495 aaKnown RBP18.38■□□□□ 0.53
ABCE1-206ENST00000506506 NACADO15069 1562 aa18.3■□□□□ 0.52
ABCE1-206ENST00000506506 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
ABCE1-206ENST00000506506 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
ABCE1-206ENST00000506506 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
ABCE1-206ENST00000506506 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
ABCE1-206ENST00000506506 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
ABCE1-206ENST00000506506 CHIC1Q5VXU3 224 aa17.96■□□□□ 0.47
ABCE1-206ENST00000506506 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.44
ABCE1-206ENST00000506506 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
ABCE1-206ENST00000506506 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
ABCE1-206ENST00000506506 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
ABCE1-206ENST00000506506 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
ABCE1-206ENST00000506506 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
ABCE1-206ENST00000506506 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
ABCE1-206ENST00000506506 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
ABCE1-206ENST00000506506 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
ABCE1-206ENST00000506506 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
ABCE1-206ENST00000506506 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
ABCE1-206ENST00000506506 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
ABCE1-206ENST00000506506 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
ABCE1-206ENST00000506506 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
ABCE1-206ENST00000506506 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
ABCE1-206ENST00000506506 HMGXB3Q12766 1538 aa16.81■□□□□ 0.28
ABCE1-206ENST00000506506 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
ABCE1-206ENST00000506506 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
ABCE1-206ENST00000506506 WIZO95785 1651 aa16.77■□□□□ 0.28
ABCE1-206ENST00000506506 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
ABCE1-206ENST00000506506 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
ABCE1-206ENST00000506506 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
ABCE1-206ENST00000506506 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
ABCE1-206ENST00000506506 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
ABCE1-206ENST00000506506 PRDM2Q13029 1718 aa16.35■□□□□ 0.21
ABCE1-206ENST00000506506 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
ABCE1-206ENST00000506506 CFTRP13569 1480 aa16.29■□□□□ 0.2
ABCE1-206ENST00000506506 PDS5BQ9NTI5 1447 aa16.26■□□□□ 0.19
ABCE1-206ENST00000506506 NESP48681 1621 aa16.25■□□□□ 0.19
ABCE1-206ENST00000506506 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
ABCE1-206ENST00000506506 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
ABCE1-206ENST00000506506 CUX2O14529 1486 aa16.21■□□□□ 0.19
ABCE1-206ENST00000506506 KIF21AQ7Z4S6 1674 aa16.18■□□□□ 0.18
ABCE1-206ENST00000506506 FANCD2Q9BXW9 1451 aa16.15■□□□□ 0.18
ABCE1-206ENST00000506506 CEP164Q9UPV0 1460 aa16.15■□□□□ 0.18
ABCE1-206ENST00000506506 MRC2Q9UBG0 1479 aa16.05■□□□□ 0.16
ABCE1-206ENST00000506506 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
ABCE1-206ENST00000506506 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
ABCE1-206ENST00000506506 WDR62O43379 1518 aa15.99■□□□□ 0.15
ABCE1-206ENST00000506506 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
ABCE1-206ENST00000506506 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
ABCE1-206ENST00000506506 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
ABCE1-206ENST00000506506 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
ABCE1-206ENST00000506506 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
ABCE1-206ENST00000506506 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
ABCE1-206ENST00000506506 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
ABCE1-206ENST00000506506 CUX1P39880 1505 aa15.85■□□□□ 0.13
ABCE1-206ENST00000506506 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
ABCE1-206ENST00000506506 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
ABCE1-206ENST00000506506 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
ABCE1-206ENST00000506506 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
ABCE1-206ENST00000506506 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
ABCE1-206ENST00000506506 SOGA1O94964 1423 aa15.73■□□□□ 0.11
ABCE1-206ENST00000506506 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
ABCE1-206ENST00000506506 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
ABCE1-206ENST00000506506 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
ABCE1-206ENST00000506506 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
ABCE1-206ENST00000506506 EIF4G3O43432 1585 aaKnown RBP15.65■□□□□ 0.1
ABCE1-206ENST00000506506 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
ABCE1-206ENST00000506506 PBRM1Q86U86 1689 aa15.6■□□□□ 0.09
ABCE1-206ENST00000506506 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
ABCE1-206ENST00000506506 KIF27Q86VH2 1401 aa15.58■□□□□ 0.08
ABCE1-206ENST00000506506 GAPVD1Q14C86 1478 aa15.58■□□□□ 0.08
ABCE1-206ENST00000506506 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
ABCE1-206ENST00000506506 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
ABCE1-206ENST00000506506 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.089e-7■■■■■ 29.5
ABCE1-206ENST00000506506 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
ABCE1-206ENST00000506506 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.07
ABCE1-206ENST00000506506 EEA1Q15075 1411 aa15.5■□□□□ 0.07
ABCE1-206ENST00000506506 CUL7Q14999 1698 aa15.49■□□□□ 0.07
ABCE1-206ENST00000506506 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.07
ABCE1-206ENST00000506506 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
ABCE1-206ENST00000506506 ADAMTS12P58397 1594 aa15.44■□□□□ 0.06
ABCE1-206ENST00000506506 CHD1O14646 1710 aa15.43■□□□□ 0.06
ABCE1-206ENST00000506506 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
ABCE1-206ENST00000506506 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
ABCE1-206ENST00000506506 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
ABCE1-206ENST00000506506 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
ABCE1-206ENST00000506506 IGF1RP08069 1367 aa15.37■□□□□ 0.05
ABCE1-206ENST00000506506 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
ABCE1-206ENST00000506506 FBLN2P98095 1184 aa15.35■□□□□ 0.05
ABCE1-206ENST00000506506 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
ABCE1-206ENST00000506506 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
ABCE1-206ENST00000506506 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
ABCE1-206ENST00000506506 RAPGEF2Q9Y4G8 1499 aa15.32■□□□□ 0.04
ABCE1-206ENST00000506506 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
ABCE1-206ENST00000506506 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
ABCE1-206ENST00000506506 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
ABCE1-206ENST00000506506 KIF21BO75037 1637 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms