RNA–Protein interactions for RNA: ENST00000296577.8

ABCE1-201, Transcript of ATP binding cassette subfamily E member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCE1, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-201ENST00000296577 NISCHQ9Y2I1 1504 aa18.42■□□□□ 0.54
ABCE1-201ENST00000296577 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
ABCE1-201ENST00000296577 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
ABCE1-201ENST00000296577 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
ABCE1-201ENST00000296577 ZCCHC6Q5VYS8 1495 aaKnown RBP15.47■□□□□ 0.07
ABCE1-201ENST00000296577 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
ABCE1-201ENST00000296577 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
ABCE1-201ENST00000296577 CCDC180Q9P1Z9 1646 aa15.3■□□□□ 0.04
ABCE1-201ENST00000296577 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
ABCE1-201ENST00000296577 LOC105371045A0A1W2PR82 267 aa15.25■□□□□ 0.03
ABCE1-201ENST00000296577 FAM9AQ8IZU1 332 aaPredicted RBP15.21■□□□□ 0.03
ABCE1-201ENST00000296577 MYO15BQ96JP2 1530 aa15.16■□□□□ 0.02
ABCE1-201ENST00000296577 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
ABCE1-201ENST00000296577 ABCC9O60706 1549 aa14.99□□□□□ -0.01
ABCE1-201ENST00000296577 PPARGC1BQ86YN6 1023 aaKnown RBP14.96□□□□□ -0.01
ABCE1-201ENST00000296577 HRCP23327 699 aa14.95□□□□□ -0.02
ABCE1-201ENST00000296577 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
ABCE1-201ENST00000296577 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
ABCE1-201ENST00000296577 DCAF1Q9Y4B6 1507 aa14.76□□□□□ -0.05
ABCE1-201ENST00000296577 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
ABCE1-201ENST00000296577 TRIM26Q12899 539 aaPredicted RBP14.72□□□□□ -0.05
ABCE1-201ENST00000296577 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
ABCE1-201ENST00000296577 CECR2Q9BXF3 1484 aa14.6□□□□□ -0.07
ABCE1-201ENST00000296577 RB1CC1Q8TDY2 1594 aa14.53□□□□□ -0.08
ABCE1-201ENST00000296577 RANGAP1P46060 587 aaPredicted RBP14.52□□□□□ -0.09
ABCE1-201ENST00000296577 UBTFP17480 764 aaKnown RBP14.46□□□□□ -0.1
ABCE1-201ENST00000296577 MROH2BQ7Z745 1585 aa14.44□□□□□ -0.1
ABCE1-201ENST00000296577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.4□□□□□ -0.1
ABCE1-201ENST00000296577 CCER1Q8TC90 406 aaPredicted RBP14.4□□□□□ -0.1
ABCE1-201ENST00000296577 NACADO15069 1562 aa14.37□□□□□ -0.11
ABCE1-201ENST00000296577 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
ABCE1-201ENST00000296577 WIZO95785 1651 aa14.34□□□□□ -0.11
ABCE1-201ENST00000296577 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
ABCE1-201ENST00000296577 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
ABCE1-201ENST00000296577 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
ABCE1-201ENST00000296577 APLP2Q06481 763 aa14.17□□□□□ -0.14
ABCE1-201ENST00000296577 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
ABCE1-201ENST00000296577 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
ABCE1-201ENST00000296577 SOGA1O94964 1423 aa14.12□□□□□ -0.15
ABCE1-201ENST00000296577 RUSC2Q8N2Y8 1516 aa14.02□□□□□ -0.16
ABCE1-201ENST00000296577 CEP162Q5TB80 1403 aa14.02□□□□□ -0.17
ABCE1-201ENST00000296577 YTHDC1Q96MU7 727 aaKnown RBP14□□□□□ -0.17
ABCE1-201ENST00000296577 SMARCA4P51532 1647 aa13.98□□□□□ -0.17
ABCE1-201ENST00000296577 TOP2AP11388 1531 aaKnown RBP13.97□□□□□ -0.17
ABCE1-201ENST00000296577 DIEXFQ68CQ4 756 aaKnown RBP13.97□□□□□ -0.17
ABCE1-201ENST00000296577 ITGAEP38570 1179 aa13.96□□□□□ -0.17
ABCE1-201ENST00000296577 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
ABCE1-201ENST00000296577 ATP1B4Q9UN42 357 aaPredicted RBP13.94□□□□□ -0.18
ABCE1-201ENST00000296577 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
ABCE1-201ENST00000296577 TNIKQ9UKE5 1360 aa13.89□□□□□ -0.19
ABCE1-201ENST00000296577 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
ABCE1-201ENST00000296577 BAZ1BQ9UIG0 1483 aaKnown RBP13.85□□□□□ -0.19
ABCE1-201ENST00000296577 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
ABCE1-201ENST00000296577 CLIP1P30622 1438 aa13.82□□□□□ -0.2
ABCE1-201ENST00000296577 CENPBP07199 599 aaPredicted RBP13.81□□□□□ -0.2
ABCE1-201ENST00000296577 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
ABCE1-201ENST00000296577 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
ABCE1-201ENST00000296577 EEA1Q15075 1411 aa13.77□□□□□ -0.2
ABCE1-201ENST00000296577 P3H3Q8IVL6 736 aa13.77□□□□□ -0.21
ABCE1-201ENST00000296577 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
ABCE1-201ENST00000296577 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
ABCE1-201ENST00000296577 ATAD2BQ9ULI0 1458 aa13.76□□□□□ -0.21
ABCE1-201ENST00000296577 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
ABCE1-201ENST00000296577 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
ABCE1-201ENST00000296577 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
ABCE1-201ENST00000296577 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
ABCE1-201ENST00000296577 EIF4G1Q04637 1599 aaKnown RBP13.71□□□□□ -0.21
ABCE1-201ENST00000296577 RAPGEF2Q9Y4G8 1499 aa13.7□□□□□ -0.22
ABCE1-201ENST00000296577 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
ABCE1-201ENST00000296577 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
ABCE1-201ENST00000296577 MIER1Q8N108 512 aa13.65□□□□□ -0.22
ABCE1-201ENST00000296577 FAM50AQ14320 339 aaKnown RBP13.64□□□□□ -0.23
ABCE1-201ENST00000296577 VPS8Q8N3P4 1428 aa13.6□□□□□ -0.23
ABCE1-201ENST00000296577 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
ABCE1-201ENST00000296577 ARID3CA6NKF2 412 aa13.5□□□□□ -0.25
ABCE1-201ENST00000296577 CUX2O14529 1486 aa13.48□□□□□ -0.25
ABCE1-201ENST00000296577 KIF21BO75037 1637 aa13.47□□□□□ -0.25
ABCE1-201ENST00000296577 HIRIP3Q9BW71 556 aaPredicted RBP13.46□□□□□ -0.25
ABCE1-201ENST00000296577 PEG3Q9GZU2 1588 aa13.43□□□□□ -0.26
ABCE1-201ENST00000296577 CARMIL1Q5VZK9 1371 aa13.41□□□□□ -0.26
ABCE1-201ENST00000296577 SIN3AQ96ST3 1273 aa13.4□□□□□ -0.26
ABCE1-201ENST00000296577 CUX1P39880 1505 aa13.39□□□□□ -0.27
ABCE1-201ENST00000296577 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
ABCE1-201ENST00000296577 NCAPD3P42695 1498 aa13.39□□□□□ -0.27
ABCE1-201ENST00000296577 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
ABCE1-201ENST00000296577 CCNB3Q8WWL7 1395 aa13.37□□□□□ -0.27
ABCE1-201ENST00000296577 DHX57Q6P158 1386 aaKnown RBP13.36□□□□□ -0.27
ABCE1-201ENST00000296577 DDX10Q13206 875 aaKnown RBP13.35□□□□□ -0.27
ABCE1-201ENST00000296577 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
ABCE1-201ENST00000296577 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
ABCE1-201ENST00000296577 MYT1Q01538 1121 aa13.35□□□□□ -0.27
ABCE1-201ENST00000296577 IGF1RP08069 1367 aa13.35□□□□□ -0.27
ABCE1-201ENST00000296577 CNGB1Q14028 1251 aaPredicted RBP13.32□□□□□ -0.28
ABCE1-201ENST00000296577 CHIC2Q9UKJ5 165 aa13.32□□□□□ -0.28
ABCE1-201ENST00000296577 BCANQ96GW7 911 aa13.31□□□□□ -0.28
ABCE1-201ENST00000296577 CFTRP13569 1480 aa13.31□□□□□ -0.28
ABCE1-201ENST00000296577 TRIM52Q96A61 297 aa13.29□□□□□ -0.28
ABCE1-201ENST00000296577 ARHGAP35Q9NRY4 1499 aa13.29□□□□□ -0.28
ABCE1-201ENST00000296577 RAB3GAP2Q9H2M9 1393 aa13.29□□□□□ -0.28
ABCE1-201ENST00000296577 TDRD9Q8NDG6 1382 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms