RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
CTNNA1-212ENST00000518919 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
CTNNA1-212ENST00000518919 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
CTNNA1-212ENST00000518919 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
CTNNA1-212ENST00000518919 PLPPR3Q6T4P5 718 aa14.01□□□□□ -0.17
CTNNA1-212ENST00000518919 ADRA2BP18089 450 aa13.08□□□□□ -0.32
CTNNA1-212ENST00000518919 FOXD1Q16676 465 aa13.03□□□□□ -0.32
CTNNA1-212ENST00000518919 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
CTNNA1-212ENST00000518919 KCNA4P22459 653 aa12.78□□□□□ -0.36
CTNNA1-212ENST00000518919 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
CTNNA1-212ENST00000518919 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-212ENST00000518919 PPP4R3CPQ6ZMV5 832 aa12.41□□□□□ -0.42
CTNNA1-212ENST00000518919 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
CTNNA1-212ENST00000518919 NCBP3Q53F19 620 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-212ENST00000518919 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
CTNNA1-212ENST00000518919 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-212ENST00000518919 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
CTNNA1-212ENST00000518919 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-212ENST00000518919 MSH5O43196 834 aa11.82□□□□□ -0.52
CTNNA1-212ENST00000518919 ZBTB22O15209 634 aa11.76□□□□□ -0.53
CTNNA1-212ENST00000518919 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-212ENST00000518919 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
CTNNA1-212ENST00000518919 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
CTNNA1-212ENST00000518919 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
CTNNA1-212ENST00000518919 DMRT2Q9Y5R5 561 aa11.37□□□□□ -0.59
CTNNA1-212ENST00000518919 HOXD11P31277 338 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-212ENST00000518919 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
CTNNA1-212ENST00000518919 MYCNP04198 464 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-212ENST00000518919 ATXN8OSP0DMR3 200 aa11.13□□□□□ -0.63
CTNNA1-212ENST00000518919 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-212ENST00000518919 RTN4Q9NQC3 1192 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-212ENST00000518919 FKBP8Q14318 412 aa11□□□□□ -0.65
CTNNA1-212ENST00000518919 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
CTNNA1-212ENST00000518919 DCAF8L1A6NGE4 600 aa10.9□□□□□ -0.66
CTNNA1-212ENST00000518919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.85□□□□□ -0.671e-9■□□□□ 11.1
CTNNA1-212ENST00000518919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.8□□□□□ -0.68
CTNNA1-212ENST00000518919 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
CTNNA1-212ENST00000518919 SAMD1Q6SPF0 538 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-212ENST00000518919 ATF5Q9Y2D1 282 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-212ENST00000518919 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-212ENST00000518919 APLP2Q06481 763 aa10.57□□□□□ -0.72
CTNNA1-212ENST00000518919 ZNF219Q9P2Y4 722 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-212ENST00000518919 POTEDQ86YR6 584 aa10.47□□□□□ -0.73
CTNNA1-212ENST00000518919 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
CTNNA1-212ENST00000518919 SPDYE4A6NLX3 237 aa10.43□□□□□ -0.74
CTNNA1-212ENST00000518919 MKRN4PQ13434 485 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-212ENST00000518919 FBLN2P98095 1184 aa10.35□□□□□ -0.75
CTNNA1-212ENST00000518919 NISCHQ9Y2I1 1504 aa10.3□□□□□ -0.76
CTNNA1-212ENST00000518919 TRHP20396 242 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-212ENST00000518919 VASPP50552 380 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-212ENST00000518919 PROM2Q8N271 834 aa10.3□□□□□ -0.76
CTNNA1-212ENST00000518919 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-212ENST00000518919 POLA2Q14181 598 aa10.23□□□□□ -0.77
CTNNA1-212ENST00000518919 CAPN15O75808 1086 aa10.21□□□□□ -0.77
CTNNA1-212ENST00000518919 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
CTNNA1-212ENST00000518919 IFNLR1Q8IU57 520 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-212ENST00000518919 RNF39Q9H2S5 420 aa10.16□□□□□ -0.78
CTNNA1-212ENST00000518919 DCAF8L2P0C7V8 631 aa10.15□□□□□ -0.78
CTNNA1-212ENST00000518919 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-212ENST00000518919 ABCB7O75027 752 aa10.08□□□□□ -0.8
CTNNA1-212ENST00000518919 C1QBPQ07021 282 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-212ENST00000518919 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-212ENST00000518919 PKD2Q13563 968 aa10.04□□□□□ -0.8
CTNNA1-212ENST00000518919 KLHL34Q8N239 644 aa9.99□□□□□ -0.81
CTNNA1-212ENST00000518919 SPOCK2Q92563 424 aa9.98□□□□□ -0.81
CTNNA1-212ENST00000518919 ZNF692Q9BU19 519 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-212ENST00000518919 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
CTNNA1-212ENST00000518919 ECM2O94769 699 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-212ENST00000518919 OSCARQ8IYS5 282 aa9.91□□□□□ -0.82
CTNNA1-212ENST00000518919 SPDYE2BA6NHP3 402 aa9.9□□□□□ -0.82
CTNNA1-212ENST00000518919 SPDYE6P0CI01 402 aa9.9□□□□□ -0.82
CTNNA1-212ENST00000518919 SPDYE2Q495Y8 402 aa9.9□□□□□ -0.82
CTNNA1-212ENST00000518919 PLCD3Q8N3E9 789 aa9.9□□□□□ -0.82
CTNNA1-212ENST00000518919 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-212ENST00000518919 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
CTNNA1-212ENST00000518919 DSG3P32926 999 aa9.87□□□□□ -0.83
CTNNA1-212ENST00000518919 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
CTNNA1-212ENST00000518919 BCANQ96GW7 911 aa9.86□□□□□ -0.83
CTNNA1-212ENST00000518919 BBXQ8WY36 941 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-212ENST00000518919 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
CTNNA1-212ENST00000518919 MIER1Q8N108 512 aa9.82□□□□□ -0.84
CTNNA1-212ENST00000518919 RGL2O15211 777 aa9.79□□□□□ -0.84
CTNNA1-212ENST00000518919 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
CTNNA1-212ENST00000518919 PAXIP1Q6ZW49 1069 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-212ENST00000518919 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
CTNNA1-212ENST00000518919 PLEKHG5O94827 1062 aa9.76□□□□□ -0.85
CTNNA1-212ENST00000518919 ZBTB47Q9UFB7 747 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-212ENST00000518919 CIZ1Q9ULV3 898 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-212ENST00000518919 TAOK2Q9UL54 1235 aa9.7□□□□□ -0.86
CTNNA1-212ENST00000518919 KDM2AQ9Y2K7 1162 aa9.7□□□□□ -0.86
CTNNA1-212ENST00000518919 SPRYD3Q8NCJ5 442 aa9.69□□□□□ -0.86
CTNNA1-212ENST00000518919 CHGAP10645 457 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-212ENST00000518919 PRKCSHP14314 528 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-212ENST00000518919 TRIM41Q8WV44 630 aa9.66□□□□□ -0.86
CTNNA1-212ENST00000518919 TSHZ2Q9NRE2 1034 aa9.62□□□□□ -0.87
CTNNA1-212ENST00000518919 TPRNQ4KMQ1 711 aa9.58□□□□□ -0.88
CTNNA1-212ENST00000518919 HS6ST3Q8IZP7 471 aa9.58□□□□□ -0.88
CTNNA1-212ENST00000518919 GSE1Q14687 1217 aa9.57□□□□□ -0.88
CTNNA1-212ENST00000518919 RNF25Q96BH1 459 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-212ENST00000518919 CACNB1Q02641 598 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms