RNA–Protein interactions for RNA: ENST00000515593.1

HOXC10-205, Transcript of homeobox C10, humanhuman

TSL 4

Gene HOXC10, Length 526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-205ENST00000515593 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
HOXC10-205ENST00000515593 ABCC9O60706 1549 aa18.76■□□□□ 0.59
HOXC10-205ENST00000515593 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
HOXC10-205ENST00000515593 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
HOXC10-205ENST00000515593 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
HOXC10-205ENST00000515593 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
HOXC10-205ENST00000515593 DCAF8L2P0C7V8 631 aa17.47■□□□□ 0.39
HOXC10-205ENST00000515593 NACADO15069 1562 aa17.33■□□□□ 0.37
HOXC10-205ENST00000515593 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
HOXC10-205ENST00000515593 BICRAQ9NZM4 1560 aa17.09■□□□□ 0.33
HOXC10-205ENST00000515593 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
HOXC10-205ENST00000515593 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
HOXC10-205ENST00000515593 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
HOXC10-205ENST00000515593 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
HOXC10-205ENST00000515593 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
HOXC10-205ENST00000515593 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
HOXC10-205ENST00000515593 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
HOXC10-205ENST00000515593 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
HOXC10-205ENST00000515593 DCAF1Q9Y4B6 1507 aa16.53■□□□□ 0.24
HOXC10-205ENST00000515593 CUX2O14529 1486 aa16.19■□□□□ 0.18
HOXC10-205ENST00000515593 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
HOXC10-205ENST00000515593 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
HOXC10-205ENST00000515593 NESP48681 1621 aa16■□□□□ 0.15
HOXC10-205ENST00000515593 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
HOXC10-205ENST00000515593 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
HOXC10-205ENST00000515593 SMARCA2P51531 1590 aa15.83■□□□□ 0.13
HOXC10-205ENST00000515593 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
HOXC10-205ENST00000515593 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
HOXC10-205ENST00000515593 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
HOXC10-205ENST00000515593 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
HOXC10-205ENST00000515593 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
HOXC10-205ENST00000515593 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
HOXC10-205ENST00000515593 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
HOXC10-205ENST00000515593 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
HOXC10-205ENST00000515593 PEG3Q9GZU2 1588 aa15.59■□□□□ 0.09
HOXC10-205ENST00000515593 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.09
HOXC10-205ENST00000515593 MRC2Q9UBG0 1479 aa15.55■□□□□ 0.08
HOXC10-205ENST00000515593 CADPSQ9ULU8 1353 aa15.55■□□□□ 0.08
HOXC10-205ENST00000515593 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
HOXC10-205ENST00000515593 WDR62O43379 1518 aa15.49■□□□□ 0.07
HOXC10-205ENST00000515593 WIZO95785 1651 aa15.42■□□□□ 0.06
HOXC10-205ENST00000515593 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
HOXC10-205ENST00000515593 FANCD2Q9BXW9 1451 aa15.39■□□□□ 0.05
HOXC10-205ENST00000515593 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
HOXC10-205ENST00000515593 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
HOXC10-205ENST00000515593 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
HOXC10-205ENST00000515593 URB2Q14146 1524 aaKnown RBP15.28■□□□□ 0.04
HOXC10-205ENST00000515593 CYB5RLQ6IPT4 315 aa15.25■□□□□ 0.03
HOXC10-205ENST00000515593 CFTRP13569 1480 aa15.25■□□□□ 0.03
HOXC10-205ENST00000515593 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
HOXC10-205ENST00000515593 ARHGEF11O15085 1522 aa15.21■□□□□ 0.03
HOXC10-205ENST00000515593 ZNF608Q9ULD9 1512 aaPredicted RBP15.19■□□□□ 0.02
HOXC10-205ENST00000515593 FBLN2P98095 1184 aa15.11■□□□□ 0.01
HOXC10-205ENST00000515593 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
HOXC10-205ENST00000515593 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
HOXC10-205ENST00000515593 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
HOXC10-205ENST00000515593 PRDM2Q13029 1718 aa15.08■□□□□ 0
HOXC10-205ENST00000515593 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
HOXC10-205ENST00000515593 CHD1O14646 1710 aa15.06■□□□□ 0
HOXC10-205ENST00000515593 TOPBP1Q92547 1522 aa15.05■□□□□ -0
HOXC10-205ENST00000515593 EIF4G3O43432 1585 aaKnown RBP15.03■□□□□ -0
HOXC10-205ENST00000515593 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -0
HOXC10-205ENST00000515593 ARAP1Q96P48 1450 aa15.03■□□□□ -0
HOXC10-205ENST00000515593 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
HOXC10-205ENST00000515593 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
HOXC10-205ENST00000515593 DNMBPQ6XZF7 1577 aa14.92□□□□□ -0.02
HOXC10-205ENST00000515593 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
HOXC10-205ENST00000515593 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
HOXC10-205ENST00000515593 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
HOXC10-205ENST00000515593 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
HOXC10-205ENST00000515593 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
HOXC10-205ENST00000515593 SOGA1O94964 1423 aa14.84□□□□□ -0.03
HOXC10-205ENST00000515593 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
HOXC10-205ENST00000515593 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
HOXC10-205ENST00000515593 SYNJ1O43426 1573 aa14.77□□□□□ -0.05
HOXC10-205ENST00000515593 FGD5Q6ZNL6 1462 aa14.74□□□□□ -0.05
HOXC10-205ENST00000515593 GAPVD1Q14C86 1478 aa14.72□□□□□ -0.05
HOXC10-205ENST00000515593 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
HOXC10-205ENST00000515593 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
HOXC10-205ENST00000515593 SYNJ2O15056 1496 aa14.68□□□□□ -0.06
HOXC10-205ENST00000515593 CUX1P39880 1505 aa14.65□□□□□ -0.06
HOXC10-205ENST00000515593 PBRM1Q86U86 1689 aa14.64□□□□□ -0.07
HOXC10-205ENST00000515593 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
HOXC10-205ENST00000515593 ERCC6L2Q5T890 1561 aa14.63□□□□□ -0.07
HOXC10-205ENST00000515593 KIF13AQ9H1H9 1805 aa14.52□□□□□ -0.08
HOXC10-205ENST00000515593 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
HOXC10-205ENST00000515593 GRIN2AQ12879 1464 aa14.51□□□□□ -0.09
HOXC10-205ENST00000515593 ABCA5Q8WWZ7 1642 aa14.5□□□□□ -0.09
HOXC10-205ENST00000515593 ABCA10Q8WWZ4 1543 aa14.49□□□□□ -0.09
HOXC10-205ENST00000515593 FAM69CQ0P6D2 419 aa14.48□□□□□ -0.09
HOXC10-205ENST00000515593 NUP160Q12769 1436 aa14.44□□□□□ -0.1
HOXC10-205ENST00000515593 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.15e-7■■■■□ 25.5
HOXC10-205ENST00000515593 ILDR1Q86SU0 546 aaPredicted RBP14.43□□□□□ -0.1
HOXC10-205ENST00000515593 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
HOXC10-205ENST00000515593 KDM4FA0A1W2PPD8 638 aa14.42□□□□□ -0.1
HOXC10-205ENST00000515593 JPH4Q96JJ6 628 aa14.42□□□□□ -0.1
HOXC10-205ENST00000515593 PRG4Q92954 1404 aaPredicted RBP14.41□□□□□ -0.1
HOXC10-205ENST00000515593 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
HOXC10-205ENST00000515593 FHAD1B1AJZ9 1412 aa14.39□□□□□ -0.11
HOXC10-205ENST00000515593 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms