RNA–Protein interactions for RNA: ENST00000539055.5

ARL1-203, Transcript of ADP ribosylation factor like GTPase 1, humanhuman

TSL 2 BASIC

Gene ARL1, Length 1,231 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1-203ENST00000539055 AEBP2Q6ZN18 517 aaPredicted RBP32.11■■■□□ 2.73
ARL1-203ENST00000539055 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
ARL1-203ENST00000539055 SENP3Q9H4L4 574 aaPredicted RBP27.5■■□□□ 1.99
ARL1-203ENST00000539055 PHF23Q9BUL5 403 aaPredicted RBP27.11■■□□□ 1.93
ARL1-203ENST00000539055 FOXD1Q16676 465 aa25.52■■□□□ 1.68
ARL1-203ENST00000539055 PLPPR3Q6T4P5 718 aa24.65■■□□□ 1.54
ARL1-203ENST00000539055 MSH5O43196 834 aa23.95■■□□□ 1.42
ARL1-203ENST00000539055 PPP6R1Q9UPN7 881 aa23.93■■□□□ 1.42
ARL1-203ENST00000539055 PIAS4Q8N2W9 510 aaPredicted RBP23.92■■□□□ 1.42
ARL1-203ENST00000539055 ADRA2BP18089 450 aa23.88■■□□□ 1.41
ARL1-203ENST00000539055 POTEDQ86YR6 584 aa23.03■■□□□ 1.28
ARL1-203ENST00000539055 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
ARL1-203ENST00000539055 MAPK8IP2Q13387 824 aaPredicted RBP21.86■■□□□ 1.09
ARL1-203ENST00000539055 DMRT2Q9Y5R5 561 aa21.8■■□□□ 1.08
ARL1-203ENST00000539055 PPP4R3CPQ6ZMV5 832 aa21.57■■□□□ 1.04
ARL1-203ENST00000539055 CNKSR2Q8WXI2 1034 aa21.19■□□□□ 0.98
ARL1-203ENST00000539055 HOXD11P31277 338 aaPredicted RBP21.06■□□□□ 0.96
ARL1-203ENST00000539055 RNF216Q9NWF9 866 aaPredicted RBP20.96■□□□□ 0.95
ARL1-203ENST00000539055 NCBP3Q53F19 620 aaKnown RBP20.88■□□□□ 0.93
ARL1-203ENST00000539055 DCAF8L1A6NGE4 600 aa20.87■□□□□ 0.93
ARL1-203ENST00000539055 NPM3O75607 178 aaKnown RBP20.47■□□□□ 0.87
ARL1-203ENST00000539055 CACNB1Q02641 598 aaPredicted RBP20.41■□□□□ 0.86
ARL1-203ENST00000539055 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
ARL1-203ENST00000539055 RNF39Q9H2S5 420 aa20.39■□□□□ 0.85
ARL1-203ENST00000539055 KCNA4P22459 653 aa20.17■□□□□ 0.82
ARL1-203ENST00000539055 C1QBPQ07021 282 aaKnown RBP20.16■□□□□ 0.82
ARL1-203ENST00000539055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.81e-6■□□□□ 9.9
ARL1-203ENST00000539055 NISCHQ9Y2I1 1504 aa19.97■□□□□ 0.79
ARL1-203ENST00000539055 U3KPZ7 1027 aaPredicted RBP19.62■□□□□ 0.73
ARL1-203ENST00000539055 SLC4A2P04920 1241 aa19.49■□□□□ 0.71
ARL1-203ENST00000539055 CAPN15O75808 1086 aa19.28■□□□□ 0.68
ARL1-203ENST00000539055 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
ARL1-203ENST00000539055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.25■□□□□ 0.67
ARL1-203ENST00000539055 APLP2Q06481 763 aa19.25■□□□□ 0.67
ARL1-203ENST00000539055 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
ARL1-203ENST00000539055 DSG3P32926 999 aa19.13■□□□□ 0.65
ARL1-203ENST00000539055 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
ARL1-203ENST00000539055 SAMD1Q6SPF0 538 aaPredicted RBP19.1■□□□□ 0.65
ARL1-203ENST00000539055 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
ARL1-203ENST00000539055 MYCNP04198 464 aaPredicted RBP18.99■□□□□ 0.63
ARL1-203ENST00000539055 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
ARL1-203ENST00000539055 FOXD4L1Q9NU39 408 aa18.85■□□□□ 0.61
ARL1-203ENST00000539055 ABCB7O75027 752 aa18.79■□□□□ 0.6
ARL1-203ENST00000539055 POLA2Q14181 598 aa18.52■□□□□ 0.56
ARL1-203ENST00000539055 ZBTB22O15209 634 aa18.5■□□□□ 0.55
ARL1-203ENST00000539055 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
ARL1-203ENST00000539055 RBM42Q9BTD8 480 aaKnown RBP18.34■□□□□ 0.53
ARL1-203ENST00000539055 ATXN8OSP0DMR3 200 aa18.32■□□□□ 0.52
ARL1-203ENST00000539055 ZBTB12Q9Y330 459 aaPredicted RBP18.26■□□□□ 0.51
ARL1-203ENST00000539055 POTEHQ6S545 545 aa18.11■□□□□ 0.49
ARL1-203ENST00000539055 AKT1S1Q96B36 256 aa17.92■□□□□ 0.46
ARL1-203ENST00000539055 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
ARL1-203ENST00000539055 FBLN2P98095 1184 aa17.84■□□□□ 0.45
ARL1-203ENST00000539055 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
ARL1-203ENST00000539055 CHRDL2Q6WN34 429 aa17.81■□□□□ 0.44
ARL1-203ENST00000539055 CCDC180Q9P1Z9 1646 aa17.77■□□□□ 0.44
ARL1-203ENST00000539055 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
ARL1-203ENST00000539055 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
ARL1-203ENST00000539055 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
ARL1-203ENST00000539055 SPDYE2Q495Y8 402 aa17.66■□□□□ 0.42
ARL1-203ENST00000539055 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
ARL1-203ENST00000539055 MKRN4PQ13434 485 aaPredicted RBP17.6■□□□□ 0.41
ARL1-203ENST00000539055 PITPNM1O00562 1244 aa17.48■□□□□ 0.39
ARL1-203ENST00000539055 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
ARL1-203ENST00000539055 SSUH2Q9Y2M2 353 aa17.4■□□□□ 0.38
ARL1-203ENST00000539055 PIP4P2Q8N4L2 257 aa17.39■□□□□ 0.37
ARL1-203ENST00000539055 FXR2P51116 673 aaKnown RBP eCLIP17.34■□□□□ 0.37
ARL1-203ENST00000539055 SPDYE1Q8NFV5 336 aaPredicted RBP17.33■□□□□ 0.36
ARL1-203ENST00000539055 CLEC11AQ9Y240 323 aa17.24■□□□□ 0.35
ARL1-203ENST00000539055 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
ARL1-203ENST00000539055 HAX1O00165 279 aa17.07■□□□□ 0.32
ARL1-203ENST00000539055 SP7Q8TDD2 431 aaPredicted RBP17.06■□□□□ 0.32
ARL1-203ENST00000539055 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
ARL1-203ENST00000539055 ABCC9O60706 1549 aa17.01■□□□□ 0.31
ARL1-203ENST00000539055 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
ARL1-203ENST00000539055 SPDYE4A6NLX3 237 aa16.91■□□□□ 0.3
ARL1-203ENST00000539055 CHADLQ6NUI6 762 aa16.84■□□□□ 0.29
ARL1-203ENST00000539055 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
ARL1-203ENST00000539055 C19orf67A6NJJ6 358 aa16.77■□□□□ 0.28
ARL1-203ENST00000539055 EVX2Q03828 476 aa16.77■□□□□ 0.28
ARL1-203ENST00000539055 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
ARL1-203ENST00000539055 FARP1Q9Y4F1 1045 aaPredicted RBP16.67■□□□□ 0.26
ARL1-203ENST00000539055 NACADO15069 1562 aa16.56■□□□□ 0.24
ARL1-203ENST00000539055 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
ARL1-203ENST00000539055 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
ARL1-203ENST00000539055 RB1CC1Q8TDY2 1594 aa16.54■□□□□ 0.24
ARL1-203ENST00000539055 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
ARL1-203ENST00000539055 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
ARL1-203ENST00000539055 PROM2Q8N271 834 aa16.52■□□□□ 0.24
ARL1-203ENST00000539055 GABBR2O75899 941 aa16.48■□□□□ 0.23
ARL1-203ENST00000539055 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
ARL1-203ENST00000539055 CLCN6P51797 869 aa16.43■□□□□ 0.22
ARL1-203ENST00000539055 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
ARL1-203ENST00000539055 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
ARL1-203ENST00000539055 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
ARL1-203ENST00000539055 ZNF579Q8NAF0 562 aaKnown RBP16.3■□□□□ 0.2
ARL1-203ENST00000539055 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
ARL1-203ENST00000539055 MNX1P50219 401 aaPredicted RBP16.29■□□□□ 0.2
ARL1-203ENST00000539055 PLEKHG5O94827 1062 aa16.2■□□□□ 0.18
ARL1-203ENST00000539055 FKBP8Q14318 412 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms