RNA–Protein interactions for RNA: ENST00000395377.2

TFAM-203, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-203ENST00000395377 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
TFAM-203ENST00000395377 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.14
TFAM-203ENST00000395377 PHF23Q9BUL5 403 aaPredicted RBP25.08■■□□□ 1.61
TFAM-203ENST00000395377 SENP3Q9H4L4 574 aaPredicted RBP24.8■■□□□ 1.56
TFAM-203ENST00000395377 FOXD1Q16676 465 aa23.12■■□□□ 1.29
TFAM-203ENST00000395377 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
TFAM-203ENST00000395377 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
TFAM-203ENST00000395377 ADRA2BP18089 450 aa22.14■■□□□ 1.13
TFAM-203ENST00000395377 PIAS4Q8N2W9 510 aaPredicted RBP21.73■■□□□ 1.07
TFAM-203ENST00000395377 MSH5O43196 834 aa21.27■■□□□ 1
TFAM-203ENST00000395377 PPP4R3CPQ6ZMV5 832 aa20.28■□□□□ 0.84
TFAM-203ENST00000395377 MAPK8IP2Q13387 824 aaPredicted RBP20.16■□□□□ 0.82
TFAM-203ENST00000395377 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
TFAM-203ENST00000395377 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
TFAM-203ENST00000395377 KCNA4P22459 653 aa19.71■□□□□ 0.75
TFAM-203ENST00000395377 POTEDQ86YR6 584 aa19.71■□□□□ 0.75
TFAM-203ENST00000395377 CNKSR2Q8WXI2 1034 aa19.7■□□□□ 0.74
TFAM-203ENST00000395377 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
TFAM-203ENST00000395377 NPM3O75607 178 aaKnown RBP19.45■□□□□ 0.7
TFAM-203ENST00000395377 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
TFAM-203ENST00000395377 HOXD11P31277 338 aaPredicted RBP19.34■□□□□ 0.69
TFAM-203ENST00000395377 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
TFAM-203ENST00000395377 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
TFAM-203ENST00000395377 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
TFAM-203ENST00000395377 SLC4A2P04920 1241 aa18.43■□□□□ 0.54
TFAM-203ENST00000395377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.544e-10■□□□□ 11.3
TFAM-203ENST00000395377 RNF39Q9H2S5 420 aa18.27■□□□□ 0.52
TFAM-203ENST00000395377 ZBTB22O15209 634 aa18.18■□□□□ 0.5
TFAM-203ENST00000395377 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
TFAM-203ENST00000395377 FOXD4L1Q9NU39 408 aa18.1■□□□□ 0.49
TFAM-203ENST00000395377 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
TFAM-203ENST00000395377 C1QBPQ07021 282 aaKnown RBP17.99■□□□□ 0.47
TFAM-203ENST00000395377 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
TFAM-203ENST00000395377 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
TFAM-203ENST00000395377 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
TFAM-203ENST00000395377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
TFAM-203ENST00000395377 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
TFAM-203ENST00000395377 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
TFAM-203ENST00000395377 SAMD1Q6SPF0 538 aaPredicted RBP17.7■□□□□ 0.42
TFAM-203ENST00000395377 CAPN15O75808 1086 aa17.59■□□□□ 0.41
TFAM-203ENST00000395377 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
TFAM-203ENST00000395377 APLP2Q06481 763 aa17.55■□□□□ 0.4
TFAM-203ENST00000395377 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
TFAM-203ENST00000395377 ATXN8OSP0DMR3 200 aa17.43■□□□□ 0.38
TFAM-203ENST00000395377 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
TFAM-203ENST00000395377 DSG3P32926 999 aa17.35■□□□□ 0.37
TFAM-203ENST00000395377 ABCB7O75027 752 aa17.3■□□□□ 0.36
TFAM-203ENST00000395377 POLA2Q14181 598 aa17.17■□□□□ 0.34
TFAM-203ENST00000395377 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
TFAM-203ENST00000395377 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
TFAM-203ENST00000395377 FBLN2P98095 1184 aa16.68■□□□□ 0.26
TFAM-203ENST00000395377 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
TFAM-203ENST00000395377 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
TFAM-203ENST00000395377 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
TFAM-203ENST00000395377 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
TFAM-203ENST00000395377 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
TFAM-203ENST00000395377 ZNF692Q9BU19 519 aaPredicted RBP16.3■□□□□ 0.2
TFAM-203ENST00000395377 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
TFAM-203ENST00000395377 SSUH2Q9Y2M2 353 aa16.26■□□□□ 0.19
TFAM-203ENST00000395377 AKT1S1Q96B36 256 aa16.24■□□□□ 0.19
TFAM-203ENST00000395377 FKBP8Q14318 412 aa16.17■□□□□ 0.18
TFAM-203ENST00000395377 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
TFAM-203ENST00000395377 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
TFAM-203ENST00000395377 PROM2Q8N271 834 aa15.99■□□□□ 0.15
TFAM-203ENST00000395377 PITPNM1O00562 1244 aa15.98■□□□□ 0.15
TFAM-203ENST00000395377 SPDYE1Q8NFV5 336 aaPredicted RBP15.9■□□□□ 0.14
TFAM-203ENST00000395377 CLEC11AQ9Y240 323 aa15.89■□□□□ 0.13
TFAM-203ENST00000395377 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
TFAM-203ENST00000395377 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
TFAM-203ENST00000395377 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
TFAM-203ENST00000395377 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
TFAM-203ENST00000395377 FXR2P51116 673 aaKnown RBP eCLIP15.68■□□□□ 0.1
TFAM-203ENST00000395377 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
TFAM-203ENST00000395377 PRKAR2AP13861 404 aaKnown RBP15.55■□□□□ 0.08
TFAM-203ENST00000395377 POTEHQ6S545 545 aa15.55■□□□□ 0.08
TFAM-203ENST00000395377 CREBZFQ9NS37 354 aa15.53■□□□□ 0.08
TFAM-203ENST00000395377 FBXO3Q9UK99 471 aa15.52■□□□□ 0.08
TFAM-203ENST00000395377 MIER1Q8N108 512 aa15.41■□□□□ 0.06
TFAM-203ENST00000395377 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
TFAM-203ENST00000395377 MNX1P50219 401 aaPredicted RBP15.37■□□□□ 0.05
TFAM-203ENST00000395377 PLCD3Q8N3E9 789 aa15.36■□□□□ 0.05
TFAM-203ENST00000395377 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
TFAM-203ENST00000395377 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
TFAM-203ENST00000395377 IFNLR1Q8IU57 520 aaPredicted RBP15.22■□□□□ 0.03
TFAM-203ENST00000395377 HAX1O00165 279 aa15.18■□□□□ 0.02
TFAM-203ENST00000395377 C19orf67A6NJJ6 358 aa15.15■□□□□ 0.02
TFAM-203ENST00000395377 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
TFAM-203ENST00000395377 EVX2Q03828 476 aa15.15■□□□□ 0.02
TFAM-203ENST00000395377 KLHL34Q8N239 644 aa15.14■□□□□ 0.01
TFAM-203ENST00000395377 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
TFAM-203ENST00000395377 CD44P16070 742 aaKnown RBP15.09■□□□□ 0.01
TFAM-203ENST00000395377 NUBP1P53384 320 aa15.08■□□□□ 0
TFAM-203ENST00000395377 RASEFQ8IZ41 740 aa15.07■□□□□ 0
TFAM-203ENST00000395377 SPOCK2Q92563 424 aa15□□□□□ -0.01
TFAM-203ENST00000395377 TSPYL2Q9H2G4 693 aaPredicted RBP14.99□□□□□ -0.01
TFAM-203ENST00000395377 ZRANB1Q9UGI0 708 aa14.98□□□□□ -0.01
TFAM-203ENST00000395377 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
TFAM-203ENST00000395377 FAM212AQ96EL1 285 aa14.89□□□□□ -0.03
TFAM-203ENST00000395377 CCDC61Q9Y6R9 512 aa14.89□□□□□ -0.03
TFAM-203ENST00000395377 SP7Q8TDD2 431 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms