RNA–Protein interactions for RNA: ENST00000487234.1

TMEM50A-204, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-204ENST00000487234 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
TMEM50A-204ENST00000487234 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
TMEM50A-204ENST00000487234 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
TMEM50A-204ENST00000487234 PHF23Q9BUL5 403 aaPredicted RBP18.59■□□□□ 0.57
TMEM50A-204ENST00000487234 FOXD1Q16676 465 aa17.62■□□□□ 0.41
TMEM50A-204ENST00000487234 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
TMEM50A-204ENST00000487234 MSH5O43196 834 aa16.65■□□□□ 0.26
TMEM50A-204ENST00000487234 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
TMEM50A-204ENST00000487234 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
TMEM50A-204ENST00000487234 PPP6R1Q9UPN7 881 aa16.22■□□□□ 0.19
TMEM50A-204ENST00000487234 ADRA2BP18089 450 aa16.19■□□□□ 0.18
TMEM50A-204ENST00000487234 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
TMEM50A-204ENST00000487234 DMRT2Q9Y5R5 561 aa14.93□□□□□ -0.02
TMEM50A-204ENST00000487234 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
TMEM50A-204ENST00000487234 PPP4R3CPQ6ZMV5 832 aa14.56□□□□□ -0.08
TMEM50A-204ENST00000487234 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
TMEM50A-204ENST00000487234 DCAF8L1A6NGE4 600 aa14.41□□□□□ -0.1
TMEM50A-204ENST00000487234 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
TMEM50A-204ENST00000487234 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
TMEM50A-204ENST00000487234 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
TMEM50A-204ENST00000487234 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
TMEM50A-204ENST00000487234 RNF216Q9NWF9 866 aaPredicted RBP14.08□□□□□ -0.16
TMEM50A-204ENST00000487234 KCNA4P22459 653 aa13.95□□□□□ -0.18
TMEM50A-204ENST00000487234 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
TMEM50A-204ENST00000487234 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
TMEM50A-204ENST00000487234 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
TMEM50A-204ENST00000487234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.23
TMEM50A-204ENST00000487234 SLC4A1APQ9BWU0 796 aaKnown RBP13.29□□□□□ -0.28
TMEM50A-204ENST00000487234 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
TMEM50A-204ENST00000487234 CAPN15O75808 1086 aa13.21□□□□□ -0.29
TMEM50A-204ENST00000487234 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
TMEM50A-204ENST00000487234 DSG3P32926 999 aa13.15□□□□□ -0.3
TMEM50A-204ENST00000487234 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
TMEM50A-204ENST00000487234 POTEHQ6S545 545 aa13.05□□□□□ -0.32
TMEM50A-204ENST00000487234 APLP2Q06481 763 aa12.94□□□□□ -0.34
TMEM50A-204ENST00000487234 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
TMEM50A-204ENST00000487234 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
TMEM50A-204ENST00000487234 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
TMEM50A-204ENST00000487234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
TMEM50A-204ENST00000487234 HNRNPUL2Q1KMD3 747 aaKnown RBP12.88□□□□□ -0.35
TMEM50A-204ENST00000487234 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
TMEM50A-204ENST00000487234 ABCB7O75027 752 aa12.86□□□□□ -0.35
TMEM50A-204ENST00000487234 ZBTB22O15209 634 aa12.81□□□□□ -0.36
TMEM50A-204ENST00000487234 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
TMEM50A-204ENST00000487234 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
TMEM50A-204ENST00000487234 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
TMEM50A-204ENST00000487234 CSRNP3Q8WYN3 585 aa12.58□□□□□ -0.4
TMEM50A-204ENST00000487234 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
TMEM50A-204ENST00000487234 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
TMEM50A-204ENST00000487234 POLA2Q14181 598 aa12.48□□□□□ -0.41
TMEM50A-204ENST00000487234 CHRDL2Q6WN34 429 aa12.42□□□□□ -0.42
TMEM50A-204ENST00000487234 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
TMEM50A-204ENST00000487234 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
TMEM50A-204ENST00000487234 OSCARQ8IYS5 282 aa12.12□□□□□ -0.47
TMEM50A-204ENST00000487234 REM2Q8IYK8 340 aaPredicted RBP12.11□□□□□ -0.47
TMEM50A-204ENST00000487234 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
TMEM50A-204ENST00000487234 FBLN2P98095 1184 aa12.06□□□□□ -0.48
TMEM50A-204ENST00000487234 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
TMEM50A-204ENST00000487234 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
TMEM50A-204ENST00000487234 HAX1O00165 279 aa11.94□□□□□ -0.5
TMEM50A-204ENST00000487234 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
TMEM50A-204ENST00000487234 FXR2P51116 673 aaKnown RBP eCLIP11.91□□□□□ -0.5
TMEM50A-204ENST00000487234 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
TMEM50A-204ENST00000487234 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
TMEM50A-204ENST00000487234 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
TMEM50A-204ENST00000487234 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
TMEM50A-204ENST00000487234 EVX2Q03828 476 aa11.71□□□□□ -0.53
TMEM50A-204ENST00000487234 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
TMEM50A-204ENST00000487234 SPDYE1Q8NFV5 336 aaPredicted RBP11.7□□□□□ -0.54
TMEM50A-204ENST00000487234 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
TMEM50A-204ENST00000487234 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
TMEM50A-204ENST00000487234 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
TMEM50A-204ENST00000487234 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
TMEM50A-204ENST00000487234 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
TMEM50A-204ENST00000487234 CHADLQ6NUI6 762 aa11.48□□□□□ -0.57
TMEM50A-204ENST00000487234 GABBR2O75899 941 aa11.46□□□□□ -0.57
TMEM50A-204ENST00000487234 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
TMEM50A-204ENST00000487234 FKBP8Q14318 412 aa11.43□□□□□ -0.58
TMEM50A-204ENST00000487234 STAG3Q9UJ98 1225 aa11.38□□□□□ -0.59
TMEM50A-204ENST00000487234 LHX8Q68G74 356 aa11.35□□□□□ -0.59
TMEM50A-204ENST00000487234 PROM2Q8N271 834 aa11.34□□□□□ -0.59
TMEM50A-204ENST00000487234 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
TMEM50A-204ENST00000487234 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
TMEM50A-204ENST00000487234 POTEIP0CG38 1075 aa11.19□□□□□ -0.62
TMEM50A-204ENST00000487234 CLCN6P51797 869 aa11.19□□□□□ -0.62
TMEM50A-204ENST00000487234 DCBLD2Q96PD2 775 aa11.14□□□□□ -0.63
TMEM50A-204ENST00000487234 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
TMEM50A-204ENST00000487234 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
TMEM50A-204ENST00000487234 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
TMEM50A-204ENST00000487234 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
TMEM50A-204ENST00000487234 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
TMEM50A-204ENST00000487234 MIER1Q8N108 512 aa11.07□□□□□ -0.64
TMEM50A-204ENST00000487234 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
TMEM50A-204ENST00000487234 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
TMEM50A-204ENST00000487234 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
TMEM50A-204ENST00000487234 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
TMEM50A-204ENST00000487234 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
TMEM50A-204ENST00000487234 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
TMEM50A-204ENST00000487234 VASPP50552 380 aaPredicted RBP10.92□□□□□ -0.66
TMEM50A-204ENST00000487234 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms