Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 ECHDC2-206ENST00000467988 702 ntTSL 525.98■■□□□ 1.758e-9■□□□□ 9.2
HNRNPUQ00839 PDE8A-211ENST00000559742 2584 ntTSL 1 (best)25.8■■□□□ 1.725e-7■□□□□ 9.2
HNRNPUQ00839 PDE8A-204ENST00000478717 2722 ntTSL 1 (best)24.91■■□□□ 1.585e-7■□□□□ 9.2
HNRNPUQ00839 ECHDC2-208ENST00000476477 1676 ntTSL 224.37■■□□□ 1.498e-9■□□□□ 9.2
HNRNPUQ00839 ECHDC2-219ENST00000495920 456 ntTSL 324.36■■□□□ 1.498e-9■□□□□ 9.2
HNRNPUQ00839 PDE8A-205ENST00000485596 2999 ntTSL 1 (best)24.12■■□□□ 1.455e-7■□□□□ 9.2
HNRNPUQ00839 ECHDC2-204ENST00000460612 2645 ntTSL 223.65■■□□□ 1.388e-9■□□□□ 9.2
HNRNPUQ00839 PDE8A-210ENST00000559086 538 ntTSL 421.4■■□□□ 1.025e-7■□□□□ 9.2
HNRNPUQ00839 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.865e-7■□□□□ 9.2
HNRNPUQ00839 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.88e-9■□□□□ 9.2
HNRNPUQ00839 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.785e-7■□□□□ 9.2
HNRNPUQ00839 ECHDC2-211ENST00000480312 804 ntTSL 519.72■□□□□ 0.758e-9■□□□□ 9.2
HNRNPUQ00839 ECHDC2-223ENST00000542552 981 ntTSL 1 (best)19.61■□□□□ 0.738e-9■□□□□ 9.2
HNRNPUQ00839 ECHDC2-226ENST00000544531 548 ntTSL 419.55■□□□□ 0.728e-9■□□□□ 9.2
HNRNPUQ00839 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC17.46■□□□□ 0.398e-9■□□□□ 9.2
HNRNPUQ00839 PDE8A-208ENST00000557957 3716 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.135e-7■□□□□ 9.2
HNRNPUQ00839 ECHDC2-207ENST00000474789 545 ntTSL 315.75■□□□□ 0.118e-9■□□□□ 9.2
HNRNPUQ00839 ECHDC2-216ENST00000488268 631 ntTSL 313.97□□□□□ -0.178e-9■□□□□ 9.2
HNRNPUQ00839 PDE8A-213ENST00000560789 4664 ntTSL 27.97□□□□□ -1.135e-7■□□□□ 9.2
HNRNPUQ00839 PDE8A-207ENST00000557954 586 ntTSL 47.24□□□□□ -1.255e-7■□□□□ 9.2
HNRNPUQ00839 PDE8A-209ENST00000558543 644 ntTSL 37.23□□□□□ -1.255e-7■□□□□ 9.2
HNRNPUQ00839 PDE8A-206ENST00000557819 575 ntTSL 45.43□□□□□ -1.545e-7■□□□□ 9.2
HNRNPUQ00839 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC12.66□□□□□ -0.386e-8■□□□□ 9.2
HNRNPUQ00839 CYP11A1-209ENST00000566674 969 ntTSL 518.96■□□□□ 0.632e-6■□□□□ 9.2
HNRNPUQ00839 CORO1C-215ENST00000551044 567 ntTSL 39.79□□□□□ -0.843e-8■□□□□ 9.2
HNRNPUQ00839 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.933e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-221ENST00000582844 957 ntTSL 526.56■■□□□ 1.843e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.6■■□□□ 1.213e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-205ENST00000403276 1040 ntTSL 221.18■□□□□ 0.983e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-223ENST00000584472 586 ntTSL 420.91■□□□□ 0.943e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.813e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-217ENST00000581241 6094 ntTSL 219.71■□□□□ 0.753e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-211ENST00000579316 692 ntTSL 216.47■□□□□ 0.233e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-207ENST00000578194 567 ntTSL 416.3■□□□□ 0.23e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-219ENST00000581660 611 ntTSL 516.15■□□□□ 0.183e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-213ENST00000580446 612 ntTSL 315.75■□□□□ 0.113e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-218ENST00000581655 549 ntTSL 414.63□□□□□ -0.073e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-226ENST00000585026 563 ntTSL 513.52□□□□□ -0.253e-18■□□□□ 9.1
HNRNPUQ00839 CSNK1D-210ENST00000579308 598 ntTSL 212.96□□□□□ -0.333e-18■□□□□ 9.1
HNRNPUQ00839 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC17.8■□□□□ 0.445e-59■□□□□ 9.1
HNRNPUQ00839 CYP11A1-204ENST00000435365 1629 ntTSL 325.77■■□□□ 1.721e-6■□□□□ 9.1
HNRNPUQ00839 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC24.06■■□□□ 1.441e-6■□□□□ 9.1
HNRNPUQ00839 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.21e-6■□□□□ 9.1
HNRNPUQ00839 ATXN7L1-209ENST00000481880 870 ntTSL 215.59■□□□□ 0.097e-7■□□□□ 9.1
HNRNPUQ00839 ATXN7L1-208ENST00000478915 1115 ntTSL 3 BASIC12.13□□□□□ -0.477e-7■□□□□ 9.1
HNRNPUQ00839 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.487e-7■□□□□ 9.1
HNRNPUQ00839 ATXN7L1-201ENST00000318724 1470 ntTSL 1 (best) BASIC12.02□□□□□ -0.487e-7■□□□□ 9.1
HNRNPUQ00839 ITGA5-213ENST00000553071 1013 ntTSL 1 (best)22.43■■□□□ 1.181e-7■□□□□ 9.1
HNRNPUQ00839 ITGA5-204ENST00000547744 547 ntTSL 421.25■□□□□ 0.991e-7■□□□□ 9.1
HNRNPUQ00839 ITGA5-202ENST00000435631 1240 ntTSL 219.09■□□□□ 0.651e-7■□□□□ 9.1
HNRNPUQ00839 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.491e-7■□□□□ 9.1
HNRNPUQ00839 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.53■■□□□ 1.047e-7■□□□□ 9
HNRNPUQ00839 CYP11A1-207ENST00000467407 739 ntTSL 319.95■□□□□ 0.782e-8■□□□□ 9
HNRNPUQ00839 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.28■■□□□ 1.645e-6■□□□□ 9
HNRNPUQ00839 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.572e-8■□□□□ 9
HNRNPUQ00839 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.722e-8■□□□□ 9
HNRNPUQ00839 TRIM50-204ENST00000493498 555 ntTSL 417.57■□□□□ 0.42e-8■□□□□ 9
HNRNPUQ00839 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.848e-8■□□□□ 9
HNRNPUQ00839 TRA2A-204ENST00000474586 868 ntTSL 326.29■■□□□ 1.88e-8■□□□□ 9
HNRNPUQ00839 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.528e-8■□□□□ 9
HNRNPUQ00839 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.48e-8■□□□□ 9
HNRNPUQ00839 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.078e-8■□□□□ 9
HNRNPUQ00839 TRA2A-208ENST00000490942 862 ntTSL 1 (best)20.54■□□□□ 0.888e-8■□□□□ 9
HNRNPUQ00839 TRA2A-203ENST00000448549 582 ntTSL 419.02■□□□□ 0.648e-8■□□□□ 9
HNRNPUQ00839 TRA2A-209ENST00000494255 1653 ntTSL 1 (best)16.12■□□□□ 0.178e-8■□□□□ 9
HNRNPUQ00839 CYP11A1-210ENST00000569662 572 ntTSL 427.05■■□□□ 1.921e-6■□□□□ 8.9
HNRNPUQ00839 CYP11A1-206ENST00000466978 861 ntTSL 326.62■■□□□ 1.851e-6■□□□□ 8.9
HNRNPUQ00839 CYP11A1-205ENST00000450547 1045 ntTSL 325.45■■□□□ 1.661e-6■□□□□ 8.9
HNRNPUQ00839 CYP11A1-203ENST00000416978 566 ntTSL 420.19■□□□□ 0.821e-6■□□□□ 8.9
HNRNPUQ00839 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC34.06■■■■□ 3.042e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-203ENST00000594594 2251 ntTSL 531.65■■■□□ 2.662e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.912e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-220ENST00000609519 2113 ntTSL 226.81■■□□□ 1.882e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-216ENST00000599488 514 ntTSL 426.35■■□□□ 1.812e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-202ENST00000593845 2749 ntTSL 225.14■■□□□ 1.612e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-215ENST00000599137 608 ntTSL 422.39■■□□□ 1.172e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-204ENST00000594893 1453 ntTSL 222.26■■□□□ 1.152e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-207ENST00000595136 531 ntTSL 421.37■■□□□ 1.012e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-211ENST00000596213 929 ntTSL 318.77■□□□□ 0.62e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-205ENST00000595067 548 ntTSL 416.24■□□□□ 0.192e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-218ENST00000600247 583 ntTSL 414.8□□□□□ -0.042e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-213ENST00000597994 470 ntTSL 414.38□□□□□ -0.112e-7■□□□□ 8.9
HNRNPUQ00839 AKAP8L-210ENST00000596195 553 ntTSL 410.9□□□□□ -0.662e-7■□□□□ 8.9
HNRNPUQ00839 AC140504.1-201ENST00000568766 498 ntAPPRIS P1 TSL 229.83■■■□□ 2.371e-6■□□□□ 8.9
HNRNPUQ00839 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.571e-6■□□□□ 8.9
HNRNPUQ00839 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC23.36■■□□□ 1.331e-6■□□□□ 8.9
HNRNPUQ00839 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.1■■□□□ 1.291e-6■□□□□ 8.9
HNRNPUQ00839 FOXP4-206ENST00000451305 367 ntTSL 1 (best)22.46■■□□□ 1.191e-6■□□□□ 8.9
HNRNPUQ00839 MPV17L-203ENST00000564148 529 ntTSL 422.28■■□□□ 1.161e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-208ENST00000422080 578 ntTSL 322.13■■□□□ 1.131e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-212ENST00000426343 594 ntTSL 422.13■■□□□ 1.131e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-244ENST00000490697 581 ntTSL 422.13■■□□□ 1.131e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-218ENST00000441124 708 ntTSL 221.73■■□□□ 1.071e-6■□□□□ 8.9
HNRNPUQ00839 AC140504.1-203ENST00000567442 476 ntTSL 220.26■□□□□ 0.831e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-223ENST00000449864 529 ntTSL 519.94■□□□□ 0.781e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.521e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC16.97■□□□□ 0.311e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-210ENST00000423693 544 ntTSL 516.69■□□□□ 0.261e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.141e-6■□□□□ 8.9
HNRNPUQ00839 HDLBP-246ENST00000496569 374 ntTSL 415.44■□□□□ 0.061e-6■□□□□ 8.9
Retrieved 100 of 2,288 protein–RNA pairs in 449.4 ms