RNA–Protein interactions for RNA: ENST00000435631.6

ITGA5-202, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 1,240 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-202ENST00000435631 NISCHQ9Y2I1 1504 aa36.27■■■■□ 3.4
ITGA5-202ENST00000435631 CCDC180Q9P1Z9 1646 aa32.24■■■□□ 2.75
ITGA5-202ENST00000435631 ABCC9O60706 1549 aa31.85■■■□□ 2.69
ITGA5-202ENST00000435631 RB1CC1Q8TDY2 1594 aa30.45■■■□□ 2.47
ITGA5-202ENST00000435631 DCAF8L2P0C7V8 631 aa30.41■■■□□ 2.46
ITGA5-202ENST00000435631 NACADO15069 1562 aa30.39■■■□□ 2.46
ITGA5-202ENST00000435631 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
ITGA5-202ENST00000435631 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
ITGA5-202ENST00000435631 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
ITGA5-202ENST00000435631 UNC13AQ9UPW8 1703 aa29.84■■■□□ 2.37
ITGA5-202ENST00000435631 PABPN1Q86U42 306 aaKnown RBP eCLIP29.78■■■□□ 2.36
ITGA5-202ENST00000435631 BICRAQ9NZM4 1560 aa29.66■■■□□ 2.34
ITGA5-202ENST00000435631 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
ITGA5-202ENST00000435631 SCRIBQ14160 1630 aa29.47■■■□□ 2.31
ITGA5-202ENST00000435631 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
ITGA5-202ENST00000435631 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
ITGA5-202ENST00000435631 CC2D2AQ9P2K1 1620 aa28.78■■■□□ 2.2
ITGA5-202ENST00000435631 CECR2Q9BXF3 1484 aa28.61■■■□□ 2.17
ITGA5-202ENST00000435631 SMARCA4P51532 1647 aa28.16■■■□□ 2.1
ITGA5-202ENST00000435631 NCAPD3P42695 1498 aa28.09■■■□□ 2.09
ITGA5-202ENST00000435631 ATAD2BQ9ULI0 1458 aa28.09■■■□□ 2.09
ITGA5-202ENST00000435631 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
ITGA5-202ENST00000435631 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
ITGA5-202ENST00000435631 SMARCA2P51531 1590 aa27.97■■■□□ 2.07
ITGA5-202ENST00000435631 HMGXB3Q12766 1538 aa27.88■■■□□ 2.05
ITGA5-202ENST00000435631 PEG3Q9GZU2 1588 aa27.88■■■□□ 2.05
ITGA5-202ENST00000435631 BAZ1BQ9UIG0 1483 aaKnown RBP27.8■■■□□ 2.04
ITGA5-202ENST00000435631 WIZO95785 1651 aa27.66■■■□□ 2.02
ITGA5-202ENST00000435631 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
ITGA5-202ENST00000435631 NESP48681 1621 aa27.54■■■□□ 2
ITGA5-202ENST00000435631 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
ITGA5-202ENST00000435631 LAMC3Q9Y6N6 1575 aa27.32■■□□□ 1.96
ITGA5-202ENST00000435631 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
ITGA5-202ENST00000435631 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
ITGA5-202ENST00000435631 CUX2O14529 1486 aa27.17■■□□□ 1.94
ITGA5-202ENST00000435631 PDS5BQ9NTI5 1447 aa27.15■■□□□ 1.94
ITGA5-202ENST00000435631 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.94
ITGA5-202ENST00000435631 THOC2Q8NI27 1593 aaKnown RBP27.1■■□□□ 1.93
ITGA5-202ENST00000435631 CFTRP13569 1480 aa27.06■■□□□ 1.92
ITGA5-202ENST00000435631 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
ITGA5-202ENST00000435631 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
ITGA5-202ENST00000435631 MRC2Q9UBG0 1479 aa26.91■■□□□ 1.9
ITGA5-202ENST00000435631 CEP164Q9UPV0 1460 aa26.89■■□□□ 1.9
ITGA5-202ENST00000435631 WDR62O43379 1518 aa26.83■■□□□ 1.89
ITGA5-202ENST00000435631 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
ITGA5-202ENST00000435631 PRDM2Q13029 1718 aa26.76■■□□□ 1.87
ITGA5-202ENST00000435631 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
ITGA5-202ENST00000435631 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
ITGA5-202ENST00000435631 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
ITGA5-202ENST00000435631 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
ITGA5-202ENST00000435631 ABCC8Q09428 1581 aa26.4■■□□□ 1.82
ITGA5-202ENST00000435631 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
ITGA5-202ENST00000435631 ZNF608Q9ULD9 1512 aaPredicted RBP26.33■■□□□ 1.81
ITGA5-202ENST00000435631 POLA1P09884 1462 aaPredicted RBP26.27■■□□□ 1.8
ITGA5-202ENST00000435631 CUX1P39880 1505 aa26.26■■□□□ 1.79
ITGA5-202ENST00000435631 TARBP1Q13395 1621 aaKnown RBP26.24■■□□□ 1.79
ITGA5-202ENST00000435631 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.78
ITGA5-202ENST00000435631 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
ITGA5-202ENST00000435631 SOGA1O94964 1423 aa26.15■■□□□ 1.78
ITGA5-202ENST00000435631 AQRO60306 1485 aaKnown RBP eCLIP26.15■■□□□ 1.781e-7■■■■□ 23.8
ITGA5-202ENST00000435631 EIF4G3O43432 1585 aaKnown RBP26.14■■□□□ 1.78
ITGA5-202ENST00000435631 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
ITGA5-202ENST00000435631 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
ITGA5-202ENST00000435631 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
ITGA5-202ENST00000435631 SYNJ1O43426 1573 aa25.95■■□□□ 1.75
ITGA5-202ENST00000435631 WDR97A6NE52 1622 aa25.94■■□□□ 1.74
ITGA5-202ENST00000435631 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
ITGA5-202ENST00000435631 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
ITGA5-202ENST00000435631 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
ITGA5-202ENST00000435631 CHD1O14646 1710 aa25.86■■□□□ 1.73
ITGA5-202ENST00000435631 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
ITGA5-202ENST00000435631 GRIN2BQ13224 1484 aa25.84■■□□□ 1.73
ITGA5-202ENST00000435631 FBLN2P98095 1184 aa25.83■■□□□ 1.73
ITGA5-202ENST00000435631 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
ITGA5-202ENST00000435631 ABCA5Q8WWZ7 1642 aa25.8■■□□□ 1.72
ITGA5-202ENST00000435631 MAGI1Q96QZ7 1491 aaPredicted RBP25.77■■□□□ 1.72
ITGA5-202ENST00000435631 PBRM1Q86U86 1689 aa25.76■■□□□ 1.71
ITGA5-202ENST00000435631 CHMP7Q8WUX9 453 aaPredicted RBP25.71■■□□□ 1.71
ITGA5-202ENST00000435631 SYNJ2O15056 1496 aa25.69■■□□□ 1.7
ITGA5-202ENST00000435631 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
ITGA5-202ENST00000435631 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
ITGA5-202ENST00000435631 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
ITGA5-202ENST00000435631 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
ITGA5-202ENST00000435631 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
ITGA5-202ENST00000435631 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.69
ITGA5-202ENST00000435631 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
ITGA5-202ENST00000435631 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
ITGA5-202ENST00000435631 GRIN2AQ12879 1464 aa25.52■■□□□ 1.68
ITGA5-202ENST00000435631 FHAD1B1AJZ9 1412 aa25.51■■□□□ 1.67
ITGA5-202ENST00000435631 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.66
ITGA5-202ENST00000435631 ARAP1Q96P48 1450 aa25.45■■□□□ 1.66
ITGA5-202ENST00000435631 NUP160Q12769 1436 aa25.44■■□□□ 1.66
ITGA5-202ENST00000435631 CEP170Q5SW79 1584 aa25.43■■□□□ 1.66
ITGA5-202ENST00000435631 IGF1RP08069 1367 aa25.43■■□□□ 1.66
ITGA5-202ENST00000435631 KIF27Q86VH2 1401 aa25.41■■□□□ 1.66
ITGA5-202ENST00000435631 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
ITGA5-202ENST00000435631 RUSC2Q8N2Y8 1516 aa25.27■■□□□ 1.64
ITGA5-202ENST00000435631 SHROOM2Q13796 1616 aa25.24■■□□□ 1.63
ITGA5-202ENST00000435631 CUL7Q14999 1698 aa25.23■■□□□ 1.63
ITGA5-202ENST00000435631 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms