RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
PDE8A-209ENST00000558543 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
PDE8A-209ENST00000558543 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
PDE8A-209ENST00000558543 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
PDE8A-209ENST00000558543 FOXD1Q16676 465 aa20.6■□□□□ 0.89
PDE8A-209ENST00000558543 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
PDE8A-209ENST00000558543 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
PDE8A-209ENST00000558543 ADRA2BP18089 450 aa19.43■□□□□ 0.7
PDE8A-209ENST00000558543 PIAS4Q8N2W9 510 aaPredicted RBP19.32■□□□□ 0.68
PDE8A-209ENST00000558543 MSH5O43196 834 aa19.12■□□□□ 0.65
PDE8A-209ENST00000558543 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
PDE8A-209ENST00000558543 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
PDE8A-209ENST00000558543 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
PDE8A-209ENST00000558543 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
PDE8A-209ENST00000558543 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
PDE8A-209ENST00000558543 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
PDE8A-209ENST00000558543 HOXD11P31277 338 aaPredicted RBP16.97■□□□□ 0.31
PDE8A-209ENST00000558543 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
PDE8A-209ENST00000558543 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
PDE8A-209ENST00000558543 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
PDE8A-209ENST00000558543 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
PDE8A-209ENST00000558543 KCNA4P22459 653 aa16.65■□□□□ 0.26
PDE8A-209ENST00000558543 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
PDE8A-209ENST00000558543 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
PDE8A-209ENST00000558543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.197e-6■□□□□ 10.8
PDE8A-209ENST00000558543 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
PDE8A-209ENST00000558543 C1QBPQ07021 282 aaKnown RBP16.1■□□□□ 0.17
PDE8A-209ENST00000558543 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
PDE8A-209ENST00000558543 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
PDE8A-209ENST00000558543 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
PDE8A-209ENST00000558543 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
PDE8A-209ENST00000558543 CAPN15O75808 1086 aa15.62■□□□□ 0.09
PDE8A-209ENST00000558543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
PDE8A-209ENST00000558543 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
PDE8A-209ENST00000558543 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
PDE8A-209ENST00000558543 MYCNP04198 464 aaPredicted RBP15.43■□□□□ 0.06
PDE8A-209ENST00000558543 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
PDE8A-209ENST00000558543 DSG3P32926 999 aa15.41■□□□□ 0.06
PDE8A-209ENST00000558543 APLP2Q06481 763 aa15.41■□□□□ 0.06
PDE8A-209ENST00000558543 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
PDE8A-209ENST00000558543 ZBTB22O15209 634 aa15.32■□□□□ 0.04
PDE8A-209ENST00000558543 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
PDE8A-209ENST00000558543 ABCB7O75027 752 aa15.31■□□□□ 0.04
PDE8A-209ENST00000558543 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
PDE8A-209ENST00000558543 POLA2Q14181 598 aa15.04■□□□□ -0
PDE8A-209ENST00000558543 ATXN8OSP0DMR3 200 aa14.84□□□□□ -0.03
PDE8A-209ENST00000558543 EHMT2Q96KQ7 1210 aa14.84□□□□□ -0.03
PDE8A-209ENST00000558543 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
PDE8A-209ENST00000558543 ZBTB12Q9Y330 459 aaPredicted RBP14.68□□□□□ -0.06
PDE8A-209ENST00000558543 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
PDE8A-209ENST00000558543 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
PDE8A-209ENST00000558543 FBLN2P98095 1184 aa14.47□□□□□ -0.09
PDE8A-209ENST00000558543 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
PDE8A-209ENST00000558543 POTEHQ6S545 545 aa14.4□□□□□ -0.1
PDE8A-209ENST00000558543 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
PDE8A-209ENST00000558543 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
PDE8A-209ENST00000558543 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
PDE8A-209ENST00000558543 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
PDE8A-209ENST00000558543 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
PDE8A-209ENST00000558543 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
PDE8A-209ENST00000558543 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
PDE8A-209ENST00000558543 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
PDE8A-209ENST00000558543 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
PDE8A-209ENST00000558543 PIP4P2Q8N4L2 257 aa14.02□□□□□ -0.17
PDE8A-209ENST00000558543 CLEC11AQ9Y240 323 aa14.02□□□□□ -0.17
PDE8A-209ENST00000558543 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
PDE8A-209ENST00000558543 SPDYE1Q8NFV5 336 aaPredicted RBP13.97□□□□□ -0.17
PDE8A-209ENST00000558543 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
PDE8A-209ENST00000558543 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
PDE8A-209ENST00000558543 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
PDE8A-209ENST00000558543 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
PDE8A-209ENST00000558543 HAX1O00165 279 aa13.73□□□□□ -0.21
PDE8A-209ENST00000558543 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
PDE8A-209ENST00000558543 SP7Q8TDD2 431 aaPredicted RBP13.6□□□□□ -0.23
PDE8A-209ENST00000558543 EVX2Q03828 476 aa13.59□□□□□ -0.23
PDE8A-209ENST00000558543 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
PDE8A-209ENST00000558543 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
PDE8A-209ENST00000558543 C19orf67A6NJJ6 358 aa13.48□□□□□ -0.25
PDE8A-209ENST00000558543 PROM2Q8N271 834 aa13.48□□□□□ -0.25
PDE8A-209ENST00000558543 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
PDE8A-209ENST00000558543 FKBP8Q14318 412 aa13.45□□□□□ -0.26
PDE8A-209ENST00000558543 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
PDE8A-209ENST00000558543 MNX1P50219 401 aaPredicted RBP13.26□□□□□ -0.29
PDE8A-209ENST00000558543 GABBR2O75899 941 aa13.25□□□□□ -0.29
PDE8A-209ENST00000558543 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
PDE8A-209ENST00000558543 MIER1Q8N108 512 aa13.21□□□□□ -0.29
PDE8A-209ENST00000558543 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
PDE8A-209ENST00000558543 PLCD3Q8N3E9 789 aa13.14□□□□□ -0.31
PDE8A-209ENST00000558543 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
PDE8A-209ENST00000558543 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
PDE8A-209ENST00000558543 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
PDE8A-209ENST00000558543 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
PDE8A-209ENST00000558543 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
PDE8A-209ENST00000558543 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
PDE8A-209ENST00000558543 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
PDE8A-209ENST00000558543 CLCN6P51797 869 aa12.99□□□□□ -0.33
PDE8A-209ENST00000558543 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
PDE8A-209ENST00000558543 POTEIP0CG38 1075 aa12.98□□□□□ -0.33
PDE8A-209ENST00000558543 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.33
PDE8A-209ENST00000558543 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms