Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 HNRNPC-218ENST00000555215 781 ntTSL 511.29□□□□□ -0.69e-7■■■□□ 16.4
SFPQP23246 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC11.12□□□□□ -0.639e-7■■■□□ 16.4
SFPQP23246 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC10.98□□□□□ -0.659e-7■■■□□ 16.4
SFPQP23246 HNRNPC-216ENST00000555137 789 ntTSL 310.83□□□□□ -0.689e-7■■■□□ 16.4
SFPQP23246 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC10.48□□□□□ -0.739e-7■■■□□ 16.4
SFPQP23246 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC10.38□□□□□ -0.759e-7■■■□□ 16.4
SFPQP23246 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.789e-7■■■□□ 16.4
SFPQP23246 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.829e-7■■■□□ 16.4
SFPQP23246 GRB2-211ENST00000583912 561 ntTSL 49.64□□□□□ -0.879e-7■■■□□ 16.4
SFPQP23246 HNRNPC-212ENST00000554539 748 ntTSL 59.58□□□□□ -0.889e-7■■■□□ 16.4
SFPQP23246 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.43□□□□□ -0.99e-7■■■□□ 16.4
SFPQP23246 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.019e-7■■■□□ 16.4
SFPQP23246 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC8.61□□□□□ -1.039e-7■■■□□ 16.4
SFPQP23246 ZNF337-203ENST00000481610 572 ntTSL 38.4□□□□□ -1.069e-7■■■□□ 16.4
SFPQP23246 HNRNPC-210ENST00000554417 691 ntTSL 28.08□□□□□ -1.129e-7■■■□□ 16.4
SFPQP23246 INPP5A-204ENST00000423490 416 ntTSL 56.39□□□□□ -1.399e-7■■■□□ 16.4
SFPQP23246 HNRNPC-229ENST00000557157 698 ntTSL 55.11□□□□□ -1.599e-7■■■□□ 16.4
SFPQP23246 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.789e-7■■■□□ 16.4
SFPQP23246 AGRN-205ENST00000469403 899 ntTSL 329.14■■■□□ 2.262e-6■■■□□ 16.4
SFPQP23246 AGRN-206ENST00000477585 707 ntTSL 327.03■■□□□ 1.922e-6■■■□□ 16.4
SFPQP23246 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.22e-6■■■□□ 16.4
SFPQP23246 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.26■□□□□ 0.192e-6■■■□□ 16.4
SFPQP23246 ATXN1-205ENST00000479680 568 ntTSL 48.33□□□□□ -1.088e-7■■■□□ 16.4
SFPQP23246 RERE-203ENST00000400907 2973 ntTSL 5 BASIC9.12□□□□□ -0.957e-7■■■□□ 16.4
SFPQP23246 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.48□□□□□ -0.095e-10■■■□□ 16.4
SFPQP23246 AC138409.2-202ENST00000507274 458 ntBASIC6.1□□□□□ -1.435e-10■■■□□ 16.4
SFPQP23246 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.388e-7■■■□□ 16.4
SFPQP23246 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.431e-6■■■□□ 16.4
SFPQP23246 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC14.55□□□□□ -0.081e-6■■■□□ 16.4
SFPQP23246 BCAR1-213ENST00000563323 558 ntTSL 322.9■■□□□ 1.264e-7■■■□□ 16.3
SFPQP23246 BCAR1-220ENST00000568864 556 ntTSL 416.25■□□□□ 0.194e-7■■■□□ 16.3
SFPQP23246 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.73■■□□□ 1.556e-7■■■□□ 16.3
SFPQP23246 ZNRF1-209ENST00000568511 485 ntTSL 49.58□□□□□ -0.883e-6■■■□□ 16.3
SFPQP23246 KDM4B-205ENST00000588337 504 ntTSL 530.06■■■□□ 2.49e-7■■■□□ 16.3
SFPQP23246 PRKCZ-201ENST00000378567 2326 ntAPPRIS P1 TSL 1 (best)25.5■■□□□ 1.672e-6■■■□□ 16.3
SFPQP23246 PRKCZ-208ENST00000468310 690 ntTSL 524.11■■□□□ 1.452e-6■■■□□ 16.3
SFPQP23246 PRKCZ-207ENST00000466651 425 ntTSL 513.12□□□□□ -0.312e-6■■■□□ 16.3
SFPQP23246 PAPD7-206ENST00000515721 603 ntTSL 331.19■■■□□ 2.584e-7■■■□□ 16.3
SFPQP23246 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.36■■■□□ 2.294e-7■■■□□ 16.3
SFPQP23246 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.244e-7■■■□□ 16.3
SFPQP23246 BCAR1-221ENST00000569006 574 ntTSL 416.56■□□□□ 0.244e-7■■■□□ 16.3
SFPQP23246 RRBP1-205ENST00000398782 1191 ntAPPRIS ALT2 TSL 227.28■■□□□ 1.967e-9■■■□□ 16.2
SFPQP23246 PEG3-203ENST00000594389 411 ntTSL 324.91■■□□□ 1.585e-7■■■□□ 16.2
SFPQP23246 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.485e-7■■■□□ 16.2
SFPQP23246 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.335e-7■■■□□ 16.2
SFPQP23246 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.295e-7■■■□□ 16.2
SFPQP23246 PEG3-204ENST00000594706 583 ntTSL 321.02■□□□□ 0.965e-7■■■□□ 16.2
SFPQP23246 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.95■□□□□ 0.625e-7■■■□□ 16.2
SFPQP23246 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)18.2■□□□□ 0.55e-7■■■□□ 16.2
SFPQP23246 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC14.16□□□□□ -0.145e-7■■■□□ 16.2
SFPQP23246 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.715e-7■■■□□ 16.2
SFPQP23246 PEG3-205ENST00000596261 570 ntTSL 48.99□□□□□ -0.975e-7■■■□□ 16.2
SFPQP23246 TBL1X-208ENST00000452824 387 ntTSL 512.78□□□□□ -0.363e-6■■■□□ 16.2
SFPQP23246 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.883e-9■■■□□ 16.2
SFPQP23246 RNASET2-204ENST00000421787 1924 ntTSL 222.98■■□□□ 1.273e-9■■■□□ 16.2
SFPQP23246 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.68■■□□□ 1.223e-9■■■□□ 16.2
SFPQP23246 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.24■■□□□ 1.153e-9■■■□□ 16.2
SFPQP23246 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.63■□□□□ 0.893e-9■■■□□ 16.2
SFPQP23246 RNASET2-201ENST00000028008 1220 ntTSL 520.35■□□□□ 0.853e-9■■■□□ 16.2
SFPQP23246 RNASET2-207ENST00000478180 963 ntTSL 520.01■□□□□ 0.793e-9■■■□□ 16.2
SFPQP23246 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.573e-9■■■□□ 16.2
SFPQP23246 RNASET2-202ENST00000358165 2445 ntTSL 218.52■□□□□ 0.553e-9■■■□□ 16.2
SFPQP23246 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.713e-9■■■□□ 16.2
SFPQP23246 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.351e-6■■■□□ 16.2
SFPQP23246 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.21■■□□□ 1.954e-7■■■□□ 16.2
SFPQP23246 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.83■■□□□ 1.44e-7■■■□□ 16.2
SFPQP23246 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.63■□□□□ 0.254e-7■■■□□ 16.2
SFPQP23246 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.62■□□□□ 0.254e-7■■■□□ 16.2
SFPQP23246 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.214e-7■■■□□ 16.2
SFPQP23246 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.54■□□□□ 0.084e-7■■■□□ 16.2
SFPQP23246 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC12.44□□□□□ -0.424e-7■■■□□ 16.2
SFPQP23246 AFDN-204ENST00000366809 4839 ntTSL 1 (best)11.29□□□□□ -0.64e-7■■■□□ 16.2
SFPQP23246 CUX1-216ENST00000558469 588 ntTSL 410.54□□□□□ -0.722e-6■■■□□ 16.1
SFPQP23246 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC10.73□□□□□ -0.694e-6■■■□□ 16.1
SFPQP23246 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.834e-6■■■□□ 16.1
SFPQP23246 UTRN-213ENST00000628146 597 ntTSL 24.25□□□□□ -1.737e-7■■■□□ 16.1
SFPQP23246 SEPT9-223ENST00000589140 552 ntTSL 421.99■■□□□ 1.114e-8■■■□□ 16.1
SFPQP23246 SH3BP4-208ENST00000462602 257 ntTSL 510.32□□□□□ -0.762e-6■■■□□ 16.1
SFPQP23246 RERE-208ENST00000465125 396 ntTSL 526.97■■□□□ 1.911e-6■■■□□ 16.1
SFPQP23246 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC15.46■□□□□ 0.061e-6■■■□□ 16.1
SFPQP23246 RERE-215ENST00000492766 367 ntTSL 315.08■□□□□ 01e-6■■■□□ 16.1
SFPQP23246 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -01e-6■■■□□ 16.1
SFPQP23246 RERE-205ENST00000460659 454 ntTSL 211.56□□□□□ -0.561e-6■■■□□ 16.1
SFPQP23246 RERE-214ENST00000488215 962 ntTSL 310.94□□□□□ -0.661e-6■■■□□ 16.1
SFPQP23246 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.93■□□□□ 0.781e-15■■■□□ 16.1
SFPQP23246 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.761e-15■■■□□ 16.1
SFPQP23246 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.721e-15■■■□□ 16.1
SFPQP23246 INS-IGF2-201ENST00000356578 1706 ntTSL 519.28■□□□□ 0.681e-15■■■□□ 16.1
SFPQP23246 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.121e-15■■■□□ 16.1
SFPQP23246 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC13.85□□□□□ -0.191e-15■■■□□ 16.1
SFPQP23246 GSE1-204ENST00000411612 872 ntTSL 524.32■■□□□ 1.481e-6■■■□□ 16.1
SFPQP23246 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.151e-6■■■□□ 16.1
SFPQP23246 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.091e-6■■■□□ 16.1
SFPQP23246 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.041e-6■■■□□ 16.1
SFPQP23246 GSE1-215ENST00000635906 666 ntTSL 313.57□□□□□ -0.241e-6■■■□□ 16.1
SFPQP23246 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.93■■□□□ 1.263e-7■■■□□ 16.1
SFPQP23246 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.023e-7■■■□□ 16.1
SFPQP23246 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.013e-7■■■□□ 16.1
SFPQP23246 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.35■□□□□ 0.693e-7■■■□□ 16.1
SFPQP23246 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.15■□□□□ 0.663e-7■■■□□ 16.1
Retrieved 100 of 4,991 protein–RNA pairs in 157.9 ms