RNA–Protein interactions for RNA: ENST00000589140.1

SEPT9-223, Transcript of septin 9, humanhuman

TSL 4

Gene SEPT9, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-223ENST00000589140 NISCHQ9Y2I1 1504 aa48.8■■■■■ 5.4
SEPT9-223ENST00000589140 CCDC180Q9P1Z9 1646 aa43.68■■■■■ 4.58
SEPT9-223ENST00000589140 ABCC9O60706 1549 aa43.28■■■■■ 4.52
SEPT9-223ENST00000589140 RB1CC1Q8TDY2 1594 aa41.39■■■■■ 4.22
SEPT9-223ENST00000589140 NACADO15069 1562 aa41.2■■■■■ 4.19
SEPT9-223ENST00000589140 DCAF8L2P0C7V8 631 aa40.97■■■■■ 4.15
SEPT9-223ENST00000589140 MYO15BQ96JP2 1530 aa40.77■■■■■ 4.12
SEPT9-223ENST00000589140 ZCCHC6Q5VYS8 1495 aaKnown RBP40.51■■■■■ 4.08
SEPT9-223ENST00000589140 UNC13AQ9UPW8 1703 aa40.49■■■■■ 4.07
SEPT9-223ENST00000589140 DCAF1Q9Y4B6 1507 aa40.36■■■■■ 4.05
SEPT9-223ENST00000589140 PABPN1Q86U42 306 aaKnown RBP eCLIP40.32■■■■■ 4.05
SEPT9-223ENST00000589140 DNAJC5BQ9UF47 199 aa40.29■■■■■ 4.04
SEPT9-223ENST00000589140 BICRAQ9NZM4 1560 aa40.17■■■■■ 4.02
SEPT9-223ENST00000589140 SCRIBQ14160 1630 aa39.77■■■■□ 3.96
SEPT9-223ENST00000589140 SHROOM4Q9ULL8 1493 aa39.68■■■■□ 3.94
SEPT9-223ENST00000589140 EIF4G1Q04637 1599 aaKnown RBP39.16■■■■□ 3.86
SEPT9-223ENST00000589140 CC2D2AQ9P2K1 1620 aa39.14■■■■□ 3.86
SEPT9-223ENST00000589140 CECR2Q9BXF3 1484 aa38.97■■■■□ 3.83
SEPT9-223ENST00000589140 NCAPD3P42695 1498 aa38.02■■■■□ 3.68
SEPT9-223ENST00000589140 SMARCA4P51532 1647 aa38■■■■□ 3.67
SEPT9-223ENST00000589140 ATAD2BQ9ULI0 1458 aa37.94■■■■□ 3.66
SEPT9-223ENST00000589140 SMARCA2P51531 1590 aa37.87■■■■□ 3.65
SEPT9-223ENST00000589140 BAZ1AQ9NRL2 1556 aaPredicted RBP37.86■■■■□ 3.65
SEPT9-223ENST00000589140 HMGXB3Q12766 1538 aa37.77■■■■□ 3.64
SEPT9-223ENST00000589140 PEG3Q9GZU2 1588 aa37.65■■■■□ 3.62
SEPT9-223ENST00000589140 MROH2BQ7Z745 1585 aa37.59■■■■□ 3.61
SEPT9-223ENST00000589140 BAZ1BQ9UIG0 1483 aaKnown RBP37.58■■■■□ 3.61
SEPT9-223ENST00000589140 ERCC6Q03468 1493 aa37.35■■■■□ 3.57
SEPT9-223ENST00000589140 NESP48681 1621 aa37.28■■■■□ 3.56
SEPT9-223ENST00000589140 CUX2O14529 1486 aa37.19■■■■□ 3.54
SEPT9-223ENST00000589140 WIZO95785 1651 aa37.16■■■■□ 3.54
SEPT9-223ENST00000589140 LAMC3Q9Y6N6 1575 aa37.12■■■■□ 3.53
SEPT9-223ENST00000589140 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
SEPT9-223ENST00000589140 THOC2Q8NI27 1593 aaKnown RBP36.87■■■■□ 3.49
SEPT9-223ENST00000589140 PDS5BQ9NTI5 1447 aa36.87■■■■□ 3.49
SEPT9-223ENST00000589140 CADPSQ9ULU8 1353 aa36.86■■■■□ 3.49
SEPT9-223ENST00000589140 KIF21AQ7Z4S6 1674 aa36.86■■■■□ 3.49
SEPT9-223ENST00000589140 DNAJC5Q9H3Z4 198 aa36.76■■■■□ 3.48
SEPT9-223ENST00000589140 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
SEPT9-223ENST00000589140 MRC2Q9UBG0 1479 aa36.53■■■■□ 3.44
SEPT9-223ENST00000589140 CFTRP13569 1480 aa36.52■■■■□ 3.44
SEPT9-223ENST00000589140 CEP164Q9UPV0 1460 aa36.45■■■■□ 3.43
SEPT9-223ENST00000589140 WDR62O43379 1518 aa36.44■■■■□ 3.42
SEPT9-223ENST00000589140 FANCD2Q9BXW9 1451 aa36.44■■■■□ 3.42
SEPT9-223ENST00000589140 CCDC88BA6NC98 1476 aa36.3■■■■□ 3.4
SEPT9-223ENST00000589140 PRDM2Q13029 1718 aa36.25■■■■□ 3.39
SEPT9-223ENST00000589140 URB2Q14146 1524 aaKnown RBP36.13■■■■□ 3.37
SEPT9-223ENST00000589140 TOPBP1Q92547 1522 aa35.8■■■■□ 3.32
SEPT9-223ENST00000589140 ABCC8Q09428 1581 aa35.76■■■■□ 3.32
SEPT9-223ENST00000589140 IFT140Q96RY7 1462 aa35.73■■■■□ 3.31
SEPT9-223ENST00000589140 DNMBPQ6XZF7 1577 aa35.71■■■■□ 3.31
SEPT9-223ENST00000589140 ZNF608Q9ULD9 1512 aaPredicted RBP35.61■■■■□ 3.29
SEPT9-223ENST00000589140 OSCARQ8IYS5 282 aa35.52■■■■□ 3.28
SEPT9-223ENST00000589140 SUPT5HO00267 1087 aaKnown RBP35.51■■■■□ 3.28
SEPT9-223ENST00000589140 TARBP1Q13395 1621 aaKnown RBP35.47■■■■□ 3.27
SEPT9-223ENST00000589140 EIF4G3O43432 1585 aaKnown RBP35.46■■■■□ 3.27
SEPT9-223ENST00000589140 POLA1P09884 1462 aaPredicted RBP35.45■■■■□ 3.27
SEPT9-223ENST00000589140 AQRO60306 1485 aaKnown RBP eCLIP35.32■■■■□ 3.24
SEPT9-223ENST00000589140 CUX1P39880 1505 aa35.3■■■■□ 3.24
SEPT9-223ENST00000589140 RAD54L2Q9Y4B4 1467 aa35.29■■■■□ 3.24
SEPT9-223ENST00000589140 SOGA1O94964 1423 aa35.29■■■■□ 3.24
SEPT9-223ENST00000589140 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
SEPT9-223ENST00000589140 TRIM41Q8WV44 630 aa35.25■■■■□ 3.23
SEPT9-223ENST00000589140 TDRD9Q8NDG6 1382 aaKnown RBP35.16■■■■□ 3.22
SEPT9-223ENST00000589140 WDR97A6NE52 1622 aa35.16■■■■□ 3.22
SEPT9-223ENST00000589140 CHD1O14646 1710 aa35.15■■■■□ 3.22
SEPT9-223ENST00000589140 RIMBP3CA6NJZ7 1639 aa35.05■■■■□ 3.2
SEPT9-223ENST00000589140 RIMBP3BA6NNM3 1639 aa35.05■■■■□ 3.2
SEPT9-223ENST00000589140 RIMBP3Q9UFD9 1639 aa35.05■■■■□ 3.2
SEPT9-223ENST00000589140 FBLN2P98095 1184 aa35■■■■□ 3.19
SEPT9-223ENST00000589140 SNAPC4Q5SXM2 1469 aa34.98■■■■□ 3.19
SEPT9-223ENST00000589140 ARHGEF11O15085 1522 aa34.97■■■■□ 3.19
SEPT9-223ENST00000589140 GRIN2BQ13224 1484 aa34.96■■■■□ 3.19
SEPT9-223ENST00000589140 MAGI1Q96QZ7 1491 aaPredicted RBP34.93■■■■□ 3.18
SEPT9-223ENST00000589140 ABCA10Q8WWZ4 1543 aa34.91■■■■□ 3.18
SEPT9-223ENST00000589140 PBRM1Q86U86 1689 aa34.87■■■■□ 3.17
SEPT9-223ENST00000589140 GAPVD1Q14C86 1478 aa34.87■■■■□ 3.17
SEPT9-223ENST00000589140 BIVM-ERCC5R4GMW8 1640 aa34.86■■■■□ 3.17
SEPT9-223ENST00000589140 TOP2BQ02880 1626 aa34.84■■■■□ 3.17
SEPT9-223ENST00000589140 WRNQ14191 1432 aaPredicted RBP eCLIP34.84■■■■□ 3.17
SEPT9-223ENST00000589140 ABCA5Q8WWZ7 1642 aa34.84■■■■□ 3.17
SEPT9-223ENST00000589140 CHMP7Q8WUX9 453 aaPredicted RBP34.82■■■■□ 3.16
SEPT9-223ENST00000589140 SYNJ1O43426 1573 aa34.8■■■■□ 3.16
SEPT9-223ENST00000589140 SYNJ2O15056 1496 aa34.8■■■■□ 3.16
SEPT9-223ENST00000589140 CLASP1Q7Z460 1538 aa34.74■■■■□ 3.15
SEPT9-223ENST00000589140 CYB5RLQ6IPT4 315 aa34.66■■■■□ 3.14
SEPT9-223ENST00000589140 ARAP1Q96P48 1450 aa34.65■■■■□ 3.14
SEPT9-223ENST00000589140 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
SEPT9-223ENST00000589140 GRIN2AQ12879 1464 aa34.51■■■■□ 3.11
SEPT9-223ENST00000589140 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
SEPT9-223ENST00000589140 FHAD1B1AJZ9 1412 aa34.45■■■■□ 3.11
SEPT9-223ENST00000589140 NUP160Q12769 1436 aa34.38■■■■□ 3.09
SEPT9-223ENST00000589140 CEP170Q5SW79 1584 aa34.37■■■■□ 3.09
SEPT9-223ENST00000589140 SHROOM2Q13796 1616 aa34.21■■■■□ 3.07
SEPT9-223ENST00000589140 ERCC6L2Q5T890 1561 aa34.2■■■■□ 3.07
SEPT9-223ENST00000589140 KIF27Q86VH2 1401 aa34.16■■■■□ 3.06
SEPT9-223ENST00000589140 TRHP20396 242 aaPredicted RBP34.15■■■■□ 3.06
SEPT9-223ENST00000589140 IGF1RP08069 1367 aa34.1■■■■□ 3.05
SEPT9-223ENST00000589140 CUL7Q14999 1698 aa34.06■■■■□ 3.04
SEPT9-223ENST00000589140 RUSC2Q8N2Y8 1516 aa34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms