RNA–Protein interactions for RNA: ENST00000488215.5

RERE-214, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-214ENST00000488215 NISCHQ9Y2I1 1504 aa24.14■■□□□ 1.45
RERE-214ENST00000488215 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
RERE-214ENST00000488215 ABCC9O60706 1549 aa21.33■■□□□ 1
RERE-214ENST00000488215 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
RERE-214ENST00000488215 NACADO15069 1562 aa20.32■□□□□ 0.84
RERE-214ENST00000488215 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
RERE-214ENST00000488215 ZCCHC6Q5VYS8 1495 aaKnown RBP20.09■□□□□ 0.81
RERE-214ENST00000488215 MYO15BQ96JP2 1530 aa20.08■□□□□ 0.81
RERE-214ENST00000488215 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
RERE-214ENST00000488215 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
RERE-214ENST00000488215 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.77
RERE-214ENST00000488215 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
RERE-214ENST00000488215 SCRIBQ14160 1630 aa19.74■□□□□ 0.75
RERE-214ENST00000488215 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
RERE-214ENST00000488215 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
RERE-214ENST00000488215 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
RERE-214ENST00000488215 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
RERE-214ENST00000488215 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
RERE-214ENST00000488215 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
RERE-214ENST00000488215 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
RERE-214ENST00000488215 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
RERE-214ENST00000488215 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
RERE-214ENST00000488215 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
RERE-214ENST00000488215 HMGXB3Q12766 1538 aa18.66■□□□□ 0.58
RERE-214ENST00000488215 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
RERE-214ENST00000488215 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
RERE-214ENST00000488215 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
RERE-214ENST00000488215 WIZO95785 1651 aa18.44■□□□□ 0.54
RERE-214ENST00000488215 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
RERE-214ENST00000488215 NESP48681 1621 aa18.39■□□□□ 0.53
RERE-214ENST00000488215 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
RERE-214ENST00000488215 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
RERE-214ENST00000488215 CUX2O14529 1486 aa18.26■□□□□ 0.51
RERE-214ENST00000488215 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
RERE-214ENST00000488215 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
RERE-214ENST00000488215 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
RERE-214ENST00000488215 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
RERE-214ENST00000488215 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
RERE-214ENST00000488215 CFTRP13569 1480 aa18.02■□□□□ 0.48
RERE-214ENST00000488215 MRC2Q9UBG0 1479 aa18.02■□□□□ 0.48
RERE-214ENST00000488215 CEP164Q9UPV0 1460 aa18.02■□□□□ 0.48
RERE-214ENST00000488215 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
RERE-214ENST00000488215 WDR62O43379 1518 aa17.98■□□□□ 0.47
RERE-214ENST00000488215 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
RERE-214ENST00000488215 CCDC88BA6NC98 1476 aa17.96■□□□□ 0.47
RERE-214ENST00000488215 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
RERE-214ENST00000488215 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.45
RERE-214ENST00000488215 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
RERE-214ENST00000488215 SUPT5HO00267 1087 aaKnown RBP17.69■□□□□ 0.42
RERE-214ENST00000488215 DNMBPQ6XZF7 1577 aa17.67■□□□□ 0.42
RERE-214ENST00000488215 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
RERE-214ENST00000488215 IFT140Q96RY7 1462 aa17.62■□□□□ 0.41
RERE-214ENST00000488215 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
RERE-214ENST00000488215 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
RERE-214ENST00000488215 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
RERE-214ENST00000488215 TARBP1Q13395 1621 aaKnown RBP17.52■□□□□ 0.4
RERE-214ENST00000488215 CUX1P39880 1505 aa17.48■□□□□ 0.39
RERE-214ENST00000488215 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
RERE-214ENST00000488215 RAD54L2Q9Y4B4 1467 aa17.45■□□□□ 0.38
RERE-214ENST00000488215 AQRO60306 1485 aaKnown RBP eCLIP17.43■□□□□ 0.384e-8■■□□□ 13.8
RERE-214ENST00000488215 SOGA1O94964 1423 aa17.41■□□□□ 0.38
RERE-214ENST00000488215 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
RERE-214ENST00000488215 CHD1O14646 1710 aa17.38■□□□□ 0.37
RERE-214ENST00000488215 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
RERE-214ENST00000488215 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
RERE-214ENST00000488215 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
RERE-214ENST00000488215 PBRM1Q86U86 1689 aa17.3■□□□□ 0.36
RERE-214ENST00000488215 BIVM-ERCC5R4GMW8 1640 aa17.3■□□□□ 0.36
RERE-214ENST00000488215 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
RERE-214ENST00000488215 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
RERE-214ENST00000488215 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
RERE-214ENST00000488215 FBLN2P98095 1184 aa17.27■□□□□ 0.36
RERE-214ENST00000488215 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
RERE-214ENST00000488215 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
RERE-214ENST00000488215 ABCA5Q8WWZ7 1642 aa17.26■□□□□ 0.35
RERE-214ENST00000488215 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
RERE-214ENST00000488215 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
RERE-214ENST00000488215 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
RERE-214ENST00000488215 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
RERE-214ENST00000488215 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
RERE-214ENST00000488215 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
RERE-214ENST00000488215 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
RERE-214ENST00000488215 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
RERE-214ENST00000488215 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
RERE-214ENST00000488215 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
RERE-214ENST00000488215 ADAMTS12P58397 1594 aa17.13■□□□□ 0.33
RERE-214ENST00000488215 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
RERE-214ENST00000488215 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
RERE-214ENST00000488215 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
RERE-214ENST00000488215 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
RERE-214ENST00000488215 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
RERE-214ENST00000488215 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
RERE-214ENST00000488215 NUP160Q12769 1436 aa16.96■□□□□ 0.3
RERE-214ENST00000488215 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
RERE-214ENST00000488215 CUL7Q14999 1698 aa16.91■□□□□ 0.3
RERE-214ENST00000488215 ERCC6L2Q5T890 1561 aa16.9■□□□□ 0.3
RERE-214ENST00000488215 SHROOM2Q13796 1616 aa16.89■□□□□ 0.29
RERE-214ENST00000488215 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
RERE-214ENST00000488215 IGF1RP08069 1367 aa16.82■□□□□ 0.28
RERE-214ENST00000488215 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1029.7 ms