RNA–Protein interactions for RNA: ENST00000568511.1

ZNRF1-209, Transcript of zinc and ring finger 1, humanhuman

TSL 4

Gene ZNRF1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1-209ENST00000568511 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
ZNRF1-209ENST00000568511 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
ZNRF1-209ENST00000568511 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
ZNRF1-209ENST00000568511 ABCC9O60706 1549 aa20.74■□□□□ 0.91
ZNRF1-209ENST00000568511 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
ZNRF1-209ENST00000568511 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
ZNRF1-209ENST00000568511 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
ZNRF1-209ENST00000568511 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
ZNRF1-209ENST00000568511 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
ZNRF1-209ENST00000568511 NACADO15069 1562 aa19.18■□□□□ 0.66
ZNRF1-209ENST00000568511 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
ZNRF1-209ENST00000568511 FOXD1Q16676 465 aa19.12■□□□□ 0.65
ZNRF1-209ENST00000568511 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
ZNRF1-209ENST00000568511 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
ZNRF1-209ENST00000568511 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
ZNRF1-209ENST00000568511 DNAJC5Q9H3Z4 198 aa18.78■□□□□ 0.6
ZNRF1-209ENST00000568511 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
ZNRF1-209ENST00000568511 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
ZNRF1-209ENST00000568511 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
ZNRF1-209ENST00000568511 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
ZNRF1-209ENST00000568511 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.56
ZNRF1-209ENST00000568511 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
ZNRF1-209ENST00000568511 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
ZNRF1-209ENST00000568511 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
ZNRF1-209ENST00000568511 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
ZNRF1-209ENST00000568511 CUX2O14529 1486 aa18.15■□□□□ 0.5
ZNRF1-209ENST00000568511 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
ZNRF1-209ENST00000568511 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
ZNRF1-209ENST00000568511 ADRA2BP18089 450 aa17.95■□□□□ 0.46
ZNRF1-209ENST00000568511 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
ZNRF1-209ENST00000568511 MSH5O43196 834 aa17.87■□□□□ 0.45
ZNRF1-209ENST00000568511 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
ZNRF1-209ENST00000568511 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
ZNRF1-209ENST00000568511 NESP48681 1621 aa17.62■□□□□ 0.41
ZNRF1-209ENST00000568511 THOC2Q8NI27 1593 aaKnown RBP17.61■□□□□ 0.41
ZNRF1-209ENST00000568511 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
ZNRF1-209ENST00000568511 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
ZNRF1-209ENST00000568511 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
ZNRF1-209ENST00000568511 LAMC3Q9Y6N6 1575 aa17.41■□□□□ 0.38
ZNRF1-209ENST00000568511 SMARCA4P51532 1647 aa17.39■□□□□ 0.38
ZNRF1-209ENST00000568511 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
ZNRF1-209ENST00000568511 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
ZNRF1-209ENST00000568511 PDS5BQ9NTI5 1447 aa17.34■□□□□ 0.37
ZNRF1-209ENST00000568511 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
ZNRF1-209ENST00000568511 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
ZNRF1-209ENST00000568511 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
ZNRF1-209ENST00000568511 WDR62O43379 1518 aa17.23■□□□□ 0.35
ZNRF1-209ENST00000568511 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
ZNRF1-209ENST00000568511 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
ZNRF1-209ENST00000568511 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
ZNRF1-209ENST00000568511 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
ZNRF1-209ENST00000568511 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
ZNRF1-209ENST00000568511 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
ZNRF1-209ENST00000568511 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
ZNRF1-209ENST00000568511 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
ZNRF1-209ENST00000568511 FANCD2Q9BXW9 1451 aa16.97■□□□□ 0.31
ZNRF1-209ENST00000568511 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
ZNRF1-209ENST00000568511 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
ZNRF1-209ENST00000568511 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
ZNRF1-209ENST00000568511 CFTRP13569 1480 aa16.82■□□□□ 0.28
ZNRF1-209ENST00000568511 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
ZNRF1-209ENST00000568511 WIZO95785 1651 aa16.77■□□□□ 0.28
ZNRF1-209ENST00000568511 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
ZNRF1-209ENST00000568511 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
ZNRF1-209ENST00000568511 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
ZNRF1-209ENST00000568511 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
ZNRF1-209ENST00000568511 RSF1Q96T23 1441 aaPredicted RBP16.63■□□□□ 0.25
ZNRF1-209ENST00000568511 CHD1O14646 1710 aa16.59■□□□□ 0.25
ZNRF1-209ENST00000568511 TOP2AP11388 1531 aaKnown RBP16.57■□□□□ 0.24
ZNRF1-209ENST00000568511 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
ZNRF1-209ENST00000568511 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
ZNRF1-209ENST00000568511 FBLN2P98095 1184 aa16.5■□□□□ 0.23
ZNRF1-209ENST00000568511 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.234e-6■■■■■ 27
ZNRF1-209ENST00000568511 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
ZNRF1-209ENST00000568511 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
ZNRF1-209ENST00000568511 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
ZNRF1-209ENST00000568511 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
ZNRF1-209ENST00000568511 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
ZNRF1-209ENST00000568511 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
ZNRF1-209ENST00000568511 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
ZNRF1-209ENST00000568511 SYNJ1O43426 1573 aa16.36■□□□□ 0.21
ZNRF1-209ENST00000568511 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
ZNRF1-209ENST00000568511 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
ZNRF1-209ENST00000568511 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
ZNRF1-209ENST00000568511 GAPVD1Q14C86 1478 aa16.3■□□□□ 0.2
ZNRF1-209ENST00000568511 TDRD9Q8NDG6 1382 aaKnown RBP16.29■□□□□ 0.2
ZNRF1-209ENST00000568511 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
ZNRF1-209ENST00000568511 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
ZNRF1-209ENST00000568511 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
ZNRF1-209ENST00000568511 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
ZNRF1-209ENST00000568511 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
ZNRF1-209ENST00000568511 SOGA1O94964 1423 aa16.24■□□□□ 0.19
ZNRF1-209ENST00000568511 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
ZNRF1-209ENST00000568511 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
ZNRF1-209ENST00000568511 FGD5Q6ZNL6 1462 aa16.17■□□□□ 0.18
ZNRF1-209ENST00000568511 ILDR1Q86SU0 546 aaPredicted RBP16.16■□□□□ 0.18
ZNRF1-209ENST00000568511 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
ZNRF1-209ENST00000568511 PBRM1Q86U86 1689 aa16.08■□□□□ 0.16
ZNRF1-209ENST00000568511 CUX1P39880 1505 aa16.05■□□□□ 0.16
ZNRF1-209ENST00000568511 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms