RNA–Protein interactions for RNA: ENST00000635906.1

GSE1-215, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 3

Gene GSE1, Length 666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-215ENST00000635906 NISCHQ9Y2I1 1504 aa29.8■■■□□ 2.36
GSE1-215ENST00000635906 ABCC9O60706 1549 aa26.82■■□□□ 1.88
GSE1-215ENST00000635906 CCDC180Q9P1Z9 1646 aa26.81■■□□□ 1.88
GSE1-215ENST00000635906 RB1CC1Q8TDY2 1594 aa25.49■■□□□ 1.67
GSE1-215ENST00000635906 NACADO15069 1562 aa25.31■■□□□ 1.64
GSE1-215ENST00000635906 DNAJC5BQ9UF47 199 aa25.22■■□□□ 1.63
GSE1-215ENST00000635906 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
GSE1-215ENST00000635906 DCAF8L2P0C7V8 631 aa25■■□□□ 1.59
GSE1-215ENST00000635906 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
GSE1-215ENST00000635906 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
GSE1-215ENST00000635906 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
GSE1-215ENST00000635906 ZCCHC6Q5VYS8 1495 aaKnown RBP24.71■■□□□ 1.55
GSE1-215ENST00000635906 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
GSE1-215ENST00000635906 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
GSE1-215ENST00000635906 SHROOM4Q9ULL8 1493 aa24.42■■□□□ 1.5
GSE1-215ENST00000635906 CC2D2AQ9P2K1 1620 aa24.27■■□□□ 1.48
GSE1-215ENST00000635906 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.46
GSE1-215ENST00000635906 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
GSE1-215ENST00000635906 NCAPD3P42695 1498 aa23.35■■□□□ 1.33
GSE1-215ENST00000635906 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
GSE1-215ENST00000635906 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
GSE1-215ENST00000635906 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
GSE1-215ENST00000635906 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
GSE1-215ENST00000635906 CUX2O14529 1486 aa23.13■■□□□ 1.29
GSE1-215ENST00000635906 DNAJC5Q9H3Z4 198 aa23.13■■□□□ 1.29
GSE1-215ENST00000635906 BAZ1AQ9NRL2 1556 aaPredicted RBP23.11■■□□□ 1.29
GSE1-215ENST00000635906 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
GSE1-215ENST00000635906 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
GSE1-215ENST00000635906 NESP48681 1621 aa23.06■■□□□ 1.28
GSE1-215ENST00000635906 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
GSE1-215ENST00000635906 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
GSE1-215ENST00000635906 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
GSE1-215ENST00000635906 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
GSE1-215ENST00000635906 KIF21AQ7Z4S6 1674 aa22.81■■□□□ 1.24
GSE1-215ENST00000635906 WIZO95785 1651 aa22.72■■□□□ 1.23
GSE1-215ENST00000635906 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
GSE1-215ENST00000635906 CADPSQ9ULU8 1353 aa22.61■■□□□ 1.21
GSE1-215ENST00000635906 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
GSE1-215ENST00000635906 WDR62O43379 1518 aa22.52■■□□□ 1.19
GSE1-215ENST00000635906 RSF1Q96T23 1441 aaPredicted RBP22.44■■□□□ 1.18
GSE1-215ENST00000635906 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
GSE1-215ENST00000635906 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
GSE1-215ENST00000635906 CFTRP13569 1480 aa22.38■■□□□ 1.17
GSE1-215ENST00000635906 FANCD2Q9BXW9 1451 aa22.38■■□□□ 1.17
GSE1-215ENST00000635906 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
GSE1-215ENST00000635906 PRDM2Q13029 1718 aa22.25■■□□□ 1.15
GSE1-215ENST00000635906 CCDC88BA6NC98 1476 aa22.13■■□□□ 1.13
GSE1-215ENST00000635906 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
GSE1-215ENST00000635906 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
GSE1-215ENST00000635906 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
GSE1-215ENST00000635906 IFT140Q96RY7 1462 aa21.96■■□□□ 1.11
GSE1-215ENST00000635906 OSCARQ8IYS5 282 aa21.95■■□□□ 1.1
GSE1-215ENST00000635906 DNMBPQ6XZF7 1577 aa21.9■■□□□ 1.1
GSE1-215ENST00000635906 EIF4G3O43432 1585 aaKnown RBP21.89■■□□□ 1.09
GSE1-215ENST00000635906 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
GSE1-215ENST00000635906 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
GSE1-215ENST00000635906 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
GSE1-215ENST00000635906 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
GSE1-215ENST00000635906 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
GSE1-215ENST00000635906 POLA1P09884 1462 aaPredicted RBP21.76■■□□□ 1.07
GSE1-215ENST00000635906 CHD1O14646 1710 aa21.75■■□□□ 1.07
GSE1-215ENST00000635906 ARHGEF11O15085 1522 aa21.74■■□□□ 1.07
GSE1-215ENST00000635906 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.073e-9■■■■■ 36.3
GSE1-215ENST00000635906 RAD54L2Q9Y4B4 1467 aa21.67■■□□□ 1.06
GSE1-215ENST00000635906 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
GSE1-215ENST00000635906 CUX1P39880 1505 aa21.6■■□□□ 1.05
GSE1-215ENST00000635906 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
GSE1-215ENST00000635906 SOGA1O94964 1423 aa21.57■■□□□ 1.04
GSE1-215ENST00000635906 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
GSE1-215ENST00000635906 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
GSE1-215ENST00000635906 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
GSE1-215ENST00000635906 SNAPC4Q5SXM2 1469 aa21.53■■□□□ 1.04
GSE1-215ENST00000635906 FBLN2P98095 1184 aa21.49■■□□□ 1.03
GSE1-215ENST00000635906 CLASP1Q7Z460 1538 aa21.49■■□□□ 1.03
GSE1-215ENST00000635906 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
GSE1-215ENST00000635906 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.02
GSE1-215ENST00000635906 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
GSE1-215ENST00000635906 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
GSE1-215ENST00000635906 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
GSE1-215ENST00000635906 ABCA5Q8WWZ7 1642 aa21.39■■□□□ 1.01
GSE1-215ENST00000635906 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
GSE1-215ENST00000635906 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
GSE1-215ENST00000635906 GAPVD1Q14C86 1478 aa21.34■■□□□ 1.01
GSE1-215ENST00000635906 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
GSE1-215ENST00000635906 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
GSE1-215ENST00000635906 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
GSE1-215ENST00000635906 ADAMTS12P58397 1594 aa21.22■□□□□ 0.99
GSE1-215ENST00000635906 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
GSE1-215ENST00000635906 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.983e-6■■■■□ 26.6
GSE1-215ENST00000635906 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
GSE1-215ENST00000635906 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
GSE1-215ENST00000635906 CEP170Q5SW79 1584 aa21.16■□□□□ 0.98
GSE1-215ENST00000635906 NUP160Q12769 1436 aa21.12■□□□□ 0.97
GSE1-215ENST00000635906 SHROOM2Q13796 1616 aa21.08■□□□□ 0.97
GSE1-215ENST00000635906 ERICH3Q5RHP9 1530 aa21.07■□□□□ 0.96
GSE1-215ENST00000635906 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
GSE1-215ENST00000635906 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
GSE1-215ENST00000635906 PRG4Q92954 1404 aaPredicted RBP20.87■□□□□ 0.93
GSE1-215ENST00000635906 KIF13AQ9H1H9 1805 aa20.86■□□□□ 0.93
GSE1-215ENST00000635906 JPH4Q96JJ6 628 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms