RNA–Protein interactions for RNA: ENST00000628146.2

UTRN-213, Transcript of utrophin, humanhuman

TSL 2

Gene UTRN, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTRN-213ENST00000628146 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
UTRN-213ENST00000628146 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
UTRN-213ENST00000628146 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
UTRN-213ENST00000628146 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
UTRN-213ENST00000628146 FOXD1Q16676 465 aa17.06■□□□□ 0.32
UTRN-213ENST00000628146 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
UTRN-213ENST00000628146 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
UTRN-213ENST00000628146 POTEDQ86YR6 584 aa16■□□□□ 0.15
UTRN-213ENST00000628146 ADRA2BP18089 450 aa15.97■□□□□ 0.15
UTRN-213ENST00000628146 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
UTRN-213ENST00000628146 MSH5O43196 834 aa15.89■□□□□ 0.13
UTRN-213ENST00000628146 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
UTRN-213ENST00000628146 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
UTRN-213ENST00000628146 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
UTRN-213ENST00000628146 PPP4R3CPQ6ZMV5 832 aa14.4□□□□□ -0.1
UTRN-213ENST00000628146 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
UTRN-213ENST00000628146 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
UTRN-213ENST00000628146 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
UTRN-213ENST00000628146 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
UTRN-213ENST00000628146 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
UTRN-213ENST00000628146 NPM3O75607 178 aaKnown RBP13.7□□□□□ -0.22
UTRN-213ENST00000628146 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
UTRN-213ENST00000628146 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
UTRN-213ENST00000628146 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
UTRN-213ENST00000628146 KCNA4P22459 653 aa13.52□□□□□ -0.25
UTRN-213ENST00000628146 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
UTRN-213ENST00000628146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.288e-12■□□□□ 10.7
UTRN-213ENST00000628146 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
UTRN-213ENST00000628146 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
UTRN-213ENST00000628146 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
UTRN-213ENST00000628146 CAPN15O75808 1086 aa12.78□□□□□ -0.36
UTRN-213ENST00000628146 DSG3P32926 999 aa12.77□□□□□ -0.37
UTRN-213ENST00000628146 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
UTRN-213ENST00000628146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
UTRN-213ENST00000628146 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
UTRN-213ENST00000628146 APLP2Q06481 763 aa12.68□□□□□ -0.38
UTRN-213ENST00000628146 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
UTRN-213ENST00000628146 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
UTRN-213ENST00000628146 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
UTRN-213ENST00000628146 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
UTRN-213ENST00000628146 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
UTRN-213ENST00000628146 ABCB7O75027 752 aa12.5□□□□□ -0.41
UTRN-213ENST00000628146 ZBTB22O15209 634 aa12.47□□□□□ -0.41
UTRN-213ENST00000628146 POTEHQ6S545 545 aa12.45□□□□□ -0.42
UTRN-213ENST00000628146 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
UTRN-213ENST00000628146 POLA2Q14181 598 aa12.33□□□□□ -0.44
UTRN-213ENST00000628146 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
UTRN-213ENST00000628146 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
UTRN-213ENST00000628146 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
UTRN-213ENST00000628146 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
UTRN-213ENST00000628146 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
UTRN-213ENST00000628146 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
UTRN-213ENST00000628146 CHRDL2Q6WN34 429 aa11.84□□□□□ -0.51
UTRN-213ENST00000628146 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
UTRN-213ENST00000628146 FBLN2P98095 1184 aa11.81□□□□□ -0.52
UTRN-213ENST00000628146 REM2Q8IYK8 340 aaPredicted RBP11.8□□□□□ -0.52
UTRN-213ENST00000628146 EHMT2Q96KQ7 1210 aa11.78□□□□□ -0.52
UTRN-213ENST00000628146 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
UTRN-213ENST00000628146 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
UTRN-213ENST00000628146 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
UTRN-213ENST00000628146 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
UTRN-213ENST00000628146 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
UTRN-213ENST00000628146 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
UTRN-213ENST00000628146 FXR2P51116 673 aaKnown RBP eCLIP11.58□□□□□ -0.563e-25■■■■□ 20.8
UTRN-213ENST00000628146 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
UTRN-213ENST00000628146 SPDYE1Q8NFV5 336 aaPredicted RBP11.49□□□□□ -0.57
UTRN-213ENST00000628146 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
UTRN-213ENST00000628146 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
UTRN-213ENST00000628146 CLEC11AQ9Y240 323 aa11.4□□□□□ -0.58
UTRN-213ENST00000628146 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
UTRN-213ENST00000628146 HAX1O00165 279 aa11.3□□□□□ -0.6
UTRN-213ENST00000628146 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
UTRN-213ENST00000628146 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
UTRN-213ENST00000628146 EVX2Q03828 476 aa11.25□□□□□ -0.61
UTRN-213ENST00000628146 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
UTRN-213ENST00000628146 C19orf67A6NJJ6 358 aa11.19□□□□□ -0.62
UTRN-213ENST00000628146 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
UTRN-213ENST00000628146 PROM2Q8N271 834 aa11.11□□□□□ -0.63
UTRN-213ENST00000628146 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
UTRN-213ENST00000628146 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
UTRN-213ENST00000628146 GABBR2O75899 941 aa10.97□□□□□ -0.65
UTRN-213ENST00000628146 CD44P16070 742 aaKnown RBP10.97□□□□□ -0.65
UTRN-213ENST00000628146 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
UTRN-213ENST00000628146 CLCN6P51797 869 aa10.86□□□□□ -0.67
UTRN-213ENST00000628146 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
UTRN-213ENST00000628146 ZRANB1Q9UGI0 708 aa10.83□□□□□ -0.68
UTRN-213ENST00000628146 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
UTRN-213ENST00000628146 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
UTRN-213ENST00000628146 FKBP8Q14318 412 aa10.79□□□□□ -0.68
UTRN-213ENST00000628146 PAK3O75914 559 aaPredicted RBP10.72□□□□□ -0.69
UTRN-213ENST00000628146 LHX8Q68G74 356 aa10.72□□□□□ -0.69
UTRN-213ENST00000628146 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
UTRN-213ENST00000628146 MIER1Q8N108 512 aa10.7□□□□□ -0.7
UTRN-213ENST00000628146 PHF12Q96QT6 1004 aa10.7□□□□□ -0.7
UTRN-213ENST00000628146 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
UTRN-213ENST00000628146 DCBLD2Q96PD2 775 aa10.64□□□□□ -0.71
UTRN-213ENST00000628146 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
UTRN-213ENST00000628146 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
UTRN-213ENST00000628146 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
UTRN-213ENST00000628146 PLCD3Q8N3E9 789 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms