Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.32
COL11A2P13942 AC106739.1-201ENST00000617035 715 ntBASIC29.51■■■□□ 2.32
COL11A2P13942 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL11A2P13942 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL11A2P13942 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.5■■■□□ 2.31
COL11A2P13942 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
COL11A2P13942 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
COL11A2P13942 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
COL11A2P13942 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
COL11A2P13942 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.49■■■□□ 2.31
COL11A2P13942 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC29.49■■■□□ 2.31
COL11A2P13942 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
COL11A2P13942 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL11A2P13942 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.48■■■□□ 2.31
COL11A2P13942 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL11A2P13942 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL11A2P13942 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.48■■■□□ 2.31
COL11A2P13942 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL11A2P13942 CLTA-206ENST00000466396 695 ntTSL 2 BASIC29.48■■■□□ 2.31
COL11A2P13942 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL11A2P13942 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL11A2P13942 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.47■■■□□ 2.31
COL11A2P13942 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL11A2P13942 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.47■■■□□ 2.31
COL11A2P13942 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
COL11A2P13942 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.47■■■□□ 2.31
COL11A2P13942 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC29.47■■■□□ 2.31
COL11A2P13942 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
COL11A2P13942 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.47■■■□□ 2.31
COL11A2P13942 AP004609.3-201ENST00000610705 1884 ntBASIC29.47■■■□□ 2.31
COL11A2P13942 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL11A2P13942 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.46■■■□□ 2.31
COL11A2P13942 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.46■■■□□ 2.31
COL11A2P13942 LGR4-203ENST00000480977 492 ntTSL 2 BASIC29.46■■■□□ 2.31
COL11A2P13942 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC29.46■■■□□ 2.31
COL11A2P13942 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC29.46■■■□□ 2.31
COL11A2P13942 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.46■■■□□ 2.31
COL11A2P13942 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.46■■■□□ 2.31
COL11A2P13942 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL11A2P13942 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL11A2P13942 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
COL11A2P13942 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
COL11A2P13942 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC29.45■■■□□ 2.3
COL11A2P13942 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.45■■■□□ 2.3
COL11A2P13942 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.45■■■□□ 2.3
COL11A2P13942 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.45■■■□□ 2.3
COL11A2P13942 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
COL11A2P13942 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
COL11A2P13942 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
COL11A2P13942 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.44■■■□□ 2.3
COL11A2P13942 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.44■■■□□ 2.3
COL11A2P13942 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
COL11A2P13942 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.44■■■□□ 2.3
COL11A2P13942 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
COL11A2P13942 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
COL11A2P13942 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
COL11A2P13942 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
COL11A2P13942 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL11A2P13942 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.43■■■□□ 2.3
COL11A2P13942 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
COL11A2P13942 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC29.42■■■□□ 2.3
COL11A2P13942 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
COL11A2P13942 AC135279.3-201ENST00000610945 1311 ntBASIC29.41■■■□□ 2.3
COL11A2P13942 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.41■■■□□ 2.3
COL11A2P13942 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL11A2P13942 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL11A2P13942 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
COL11A2P13942 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
COL11A2P13942 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
COL11A2P13942 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL11A2P13942 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
COL11A2P13942 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
COL11A2P13942 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL11A2P13942 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC29.39■■■□□ 2.3
COL11A2P13942 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC29.39■■■□□ 2.3
COL11A2P13942 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.39■■■□□ 2.3
COL11A2P13942 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.39■■■□□ 2.29
COL11A2P13942 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
COL11A2P13942 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL11A2P13942 AC142381.2-201ENST00000566120 298 ntBASIC29.38■■■□□ 2.29
COL11A2P13942 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.38■■■□□ 2.29
COL11A2P13942 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL11A2P13942 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
COL11A2P13942 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL11A2P13942 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL11A2P13942 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL11A2P13942 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL11A2P13942 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.37■■■□□ 2.29
COL11A2P13942 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL11A2P13942 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.36■■■□□ 2.29
COL11A2P13942 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL11A2P13942 PBX2P1-201ENST00000493219 1291 ntBASIC29.35■■■□□ 2.29
COL11A2P13942 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.35■■■□□ 2.29
COL11A2P13942 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.34■■■□□ 2.29
COL11A2P13942 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL11A2P13942 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
COL11A2P13942 AC104564.3-201ENST00000582367 638 ntBASIC29.34■■■□□ 2.29
COL11A2P13942 AC139426.1-201ENST00000568218 2529 ntBASIC29.34■■■□□ 2.29
COL11A2P13942 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
COL11A2P13942 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms