Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
COL5A2P05997 AC026271.2-201ENST00000428091 497 ntBASIC31.74■■■□□ 2.67
COL5A2P05997 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.73■■■□□ 2.67
COL5A2P05997 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.73■■■□□ 2.67
COL5A2P05997 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.73■■■□□ 2.67
COL5A2P05997 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
COL5A2P05997 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.72■■■□□ 2.67
COL5A2P05997 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC31.72■■■□□ 2.67
COL5A2P05997 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
COL5A2P05997 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
COL5A2P05997 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
COL5A2P05997 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC31.71■■■□□ 2.67
COL5A2P05997 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.7■■■□□ 2.66
COL5A2P05997 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.69■■■□□ 2.66
COL5A2P05997 AP004609.3-201ENST00000610705 1884 ntBASIC31.69■■■□□ 2.66
COL5A2P05997 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL5A2P05997 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC31.69■■■□□ 2.66
COL5A2P05997 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.69■■■□□ 2.66
COL5A2P05997 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL5A2P05997 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL5A2P05997 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.68■■■□□ 2.66
COL5A2P05997 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL5A2P05997 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
COL5A2P05997 CLTA-206ENST00000466396 695 ntTSL 2 BASIC31.68■■■□□ 2.66
COL5A2P05997 SNX5-217ENST00000606557 1087 ntBASIC31.68■■■□□ 2.66
COL5A2P05997 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.68■■■□□ 2.66
COL5A2P05997 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
COL5A2P05997 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.68■■■□□ 2.66
COL5A2P05997 SUDS3P1-201ENST00000505831 966 ntBASIC31.67■■■□□ 2.66
COL5A2P05997 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.67■■■□□ 2.66
COL5A2P05997 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.67■■■□□ 2.66
COL5A2P05997 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
COL5A2P05997 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
COL5A2P05997 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
COL5A2P05997 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC31.66■■■□□ 2.66
COL5A2P05997 AC142381.2-201ENST00000566120 298 ntBASIC31.66■■■□□ 2.66
COL5A2P05997 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.66■■■□□ 2.66
COL5A2P05997 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
COL5A2P05997 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.66■■■□□ 2.66
COL5A2P05997 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
COL5A2P05997 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.65■■■□□ 2.66
COL5A2P05997 PBX2P1-201ENST00000493219 1291 ntBASIC31.65■■■□□ 2.66
COL5A2P05997 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
COL5A2P05997 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.65■■■□□ 2.66
COL5A2P05997 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
COL5A2P05997 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
COL5A2P05997 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
COL5A2P05997 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
COL5A2P05997 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.65■■■□□ 2.66
COL5A2P05997 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
COL5A2P05997 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
COL5A2P05997 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
COL5A2P05997 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
COL5A2P05997 AC092666.2-201ENST00000613287 246 ntBASIC31.64■■■□□ 2.66
COL5A2P05997 AC135279.3-201ENST00000610945 1311 ntBASIC31.63■■■□□ 2.65
COL5A2P05997 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL5A2P05997 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
COL5A2P05997 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
COL5A2P05997 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
COL5A2P05997 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.63■■■□□ 2.65
COL5A2P05997 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.63■■■□□ 2.65
COL5A2P05997 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
COL5A2P05997 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.62■■■□□ 2.65
COL5A2P05997 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.62■■■□□ 2.65
COL5A2P05997 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.62■■■□□ 2.65
COL5A2P05997 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COL5A2P05997 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
COL5A2P05997 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.62■■■□□ 2.65
COL5A2P05997 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.61■■■□□ 2.65
COL5A2P05997 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
COL5A2P05997 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
COL5A2P05997 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
COL5A2P05997 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL5A2P05997 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL5A2P05997 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.59■■■□□ 2.65
COL5A2P05997 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
COL5A2P05997 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
COL5A2P05997 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.59■■■□□ 2.65
COL5A2P05997 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
COL5A2P05997 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
COL5A2P05997 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
COL5A2P05997 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
COL5A2P05997 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.58■■■□□ 2.65
COL5A2P05997 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL5A2P05997 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL5A2P05997 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL5A2P05997 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL5A2P05997 UNC93B3-201ENST00000308076 687 ntBASIC31.57■■■□□ 2.64
COL5A2P05997 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
COL5A2P05997 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC31.57■■■□□ 2.64
COL5A2P05997 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL5A2P05997 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
COL5A2P05997 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
COL5A2P05997 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.56■■■□□ 2.64
COL5A2P05997 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.56■■■□□ 2.64
COL5A2P05997 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
COL5A2P05997 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.56■■■□□ 2.64
COL5A2P05997 AL136162.1-201ENST00000607711 1078 ntBASIC31.56■■■□□ 2.64
COL5A2P05997 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
COL5A2P05997 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms