Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHKB-CPT1BH3BT56 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 AC091060.1-201ENST00000623524 1766 ntBASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.3□□□□□ -0.28
CHKB-CPT1BH3BT56 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CHKB-CPT1BH3BT56 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHKB-CPT1BH3BT56 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
CHKB-CPT1BH3BT56 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CHKB-CPT1BH3BT56 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.27□□□□□ -0.28
CHKB-CPT1BH3BT56 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHKB-CPT1BH3BT56 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHKB-CPT1BH3BT56 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHKB-CPT1BH3BT56 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CHKB-CPT1BH3BT56 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHKB-CPT1BH3BT56 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CHKB-CPT1BH3BT56 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CHKB-CPT1BH3BT56 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHKB-CPT1BH3BT56 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHKB-CPT1BH3BT56 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 PKD1P5-201ENST00000532415 10291 ntBASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
CHKB-CPT1BH3BT56 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 AC145676.1-201ENST00000514988 2004 ntBASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHKB-CPT1BH3BT56 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CHKB-CPT1BH3BT56 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHKB-CPT1BH3BT56 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms