RNA–Protein interactions for RNA: ENST00000262186.9

KCNH2-201, Transcript of potassium voltage-gated channel subfamily H member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNH2, Length 4,286 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH2-201ENST00000262186 NISCHQ9Y2I1 1504 aa36.73■■■■□ 3.47
KCNH2-201ENST00000262186 DCAF8L2P0C7V8 631 aa36.19■■■■□ 3.38
KCNH2-201ENST00000262186 SUPT5HO00267 1087 aaKnown RBP34.78■■■■□ 3.16
KCNH2-201ENST00000262186 SHROOM4Q9ULL8 1493 aa34.76■■■■□ 3.16
KCNH2-201ENST00000262186 EHMT2Q96KQ7 1210 aa33.43■■■□□ 2.94
KCNH2-201ENST00000262186 FAM9AQ8IZU1 332 aaPredicted RBP32.71■■■□□ 2.83
KCNH2-201ENST00000262186 PCGF6Q9BYE7 350 aa32.22■■■□□ 2.75
KCNH2-201ENST00000262186 TTBK1Q5TCY1 1321 aaPredicted RBP32.15■■■□□ 2.74
KCNH2-201ENST00000262186 TRIM41Q8WV44 630 aa31.95■■■□□ 2.7
KCNH2-201ENST00000262186 RANGAP1P46060 587 aaPredicted RBP31.78■■■□□ 2.68
KCNH2-201ENST00000262186 LOC105371045A0A1W2PR82 267 aa31.6■■■□□ 2.65
KCNH2-201ENST00000262186 CHIC1Q5VXU3 224 aa31.59■■■□□ 2.65
KCNH2-201ENST00000262186 PPARGC1BQ86YN6 1023 aaKnown RBP31.56■■■□□ 2.64
KCNH2-201ENST00000262186 APLP2Q06481 763 aa31.39■■■□□ 2.62
KCNH2-201ENST00000262186 ABCC9O60706 1549 aa31.29■■■□□ 2.6
KCNH2-201ENST00000262186 UBTFP17480 764 aaKnown RBP31.27■■■□□ 2.6
KCNH2-201ENST00000262186 PABPN1Q86U42 306 aaKnown RBP eCLIP31■■■□□ 2.55
KCNH2-201ENST00000262186 CCER1Q8TC90 406 aaPredicted RBP30.97■■■□□ 2.55
KCNH2-201ENST00000262186 ATP1B4Q9UN42 357 aaPredicted RBP30.93■■■□□ 2.54
KCNH2-201ENST00000262186 TRIM26Q12899 539 aaPredicted RBP30.71■■■□□ 2.51
KCNH2-201ENST00000262186 HRCP23327 699 aa30.62■■■□□ 2.49
KCNH2-201ENST00000262186 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
KCNH2-201ENST00000262186 ZEB1P37275 1124 aaPredicted RBP30.48■■■□□ 2.47
KCNH2-201ENST00000262186 ITGAEP38570 1179 aa30.35■■■□□ 2.45
KCNH2-201ENST00000262186 HNRNPUL2Q1KMD3 747 aaKnown RBP30.33■■■□□ 2.45
KCNH2-201ENST00000262186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.25■■■□□ 2.43
KCNH2-201ENST00000262186 CCDC180Q9P1Z9 1646 aa30.21■■■□□ 2.43
KCNH2-201ENST00000262186 YTHDC1Q96MU7 727 aaKnown RBP30.2■■■□□ 2.43
KCNH2-201ENST00000262186 SCRIBQ14160 1630 aa30.2■■■□□ 2.42
KCNH2-201ENST00000262186 CENPBP07199 599 aaPredicted RBP29.91■■■□□ 2.38
KCNH2-201ENST00000262186 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
KCNH2-201ENST00000262186 CSRNP3Q8WYN3 585 aa29.65■■■□□ 2.34
KCNH2-201ENST00000262186 PELP1Q8IZL8 1130 aaKnown RBP29.58■■■□□ 2.33
KCNH2-201ENST00000262186 RSF1Q96T23 1441 aaPredicted RBP29.52■■■□□ 2.32
KCNH2-201ENST00000262186 P3H3Q8IVL6 736 aa29.51■■■□□ 2.32
KCNH2-201ENST00000262186 FAM50AQ14320 339 aaKnown RBP29.48■■■□□ 2.31
KCNH2-201ENST00000262186 CNGB1Q14028 1251 aaPredicted RBP29.46■■■□□ 2.31
KCNH2-201ENST00000262186 DIEXFQ68CQ4 756 aaKnown RBP29.41■■■□□ 2.3
KCNH2-201ENST00000262186 POLR3GLQ9BT43 218 aa29.33■■■□□ 2.29
KCNH2-201ENST00000262186 ARID3CA6NKF2 412 aa29.32■■■□□ 2.28
KCNH2-201ENST00000262186 NEUROD1Q13562 356 aa29.26■■■□□ 2.27
KCNH2-201ENST00000262186 CECR2Q9BXF3 1484 aa29.25■■■□□ 2.27
KCNH2-201ENST00000262186 FBLN2P98095 1184 aa29.18■■■□□ 2.26
KCNH2-201ENST00000262186 RB1CC1Q8TDY2 1594 aa29.14■■■□□ 2.26
KCNH2-201ENST00000262186 MYT1LQ9UL68 1186 aa29.13■■■□□ 2.25
KCNH2-201ENST00000262186 DCAF1Q9Y4B6 1507 aa29.09■■■□□ 2.25
KCNH2-201ENST00000262186 NACADO15069 1562 aa29.03■■■□□ 2.24
KCNH2-201ENST00000262186 TRIM52Q96A61 297 aa29.02■■■□□ 2.24
KCNH2-201ENST00000262186 NEFLP07196 543 aa29■■■□□ 2.23
KCNH2-201ENST00000262186 ZNF316A6NFI3 1004 aaPredicted RBP28.84■■■□□ 2.21
KCNH2-201ENST00000262186 ZNF326Q5BKZ1 582 aaKnown RBP28.76■■■□□ 2.19
KCNH2-201ENST00000262186 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.19
KCNH2-201ENST00000262186 GTF3C3Q9Y5Q9 886 aa28.75■■■□□ 2.19
KCNH2-201ENST00000262186 WRNQ14191 1432 aaPredicted RBP eCLIP28.65■■■□□ 2.184e-6■■■□□ 17.8
KCNH2-201ENST00000262186 CEP162Q5TB80 1403 aa28.64■■■□□ 2.18
KCNH2-201ENST00000262186 CLIP1P30622 1438 aa28.63■■■□□ 2.17
KCNH2-201ENST00000262186 ZNF777Q9ULD5 760 aaPredicted RBP28.63■■■□□ 2.17
KCNH2-201ENST00000262186 ERICH6Q7L0X2 663 aa28.61■■■□□ 2.17
KCNH2-201ENST00000262186 SOGA1O94964 1423 aa28.59■■■□□ 2.17
KCNH2-201ENST00000262186 BCANQ96GW7 911 aa28.57■■■□□ 2.16
KCNH2-201ENST00000262186 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
KCNH2-201ENST00000262186 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
KCNH2-201ENST00000262186 CHIC2Q9UKJ5 165 aa28.52■■■□□ 2.16
KCNH2-201ENST00000262186 ABCC8Q09428 1581 aa28.45■■■□□ 2.15
KCNH2-201ENST00000262186 HIRIP3Q9BW71 556 aaPredicted RBP28.43■■■□□ 2.14
KCNH2-201ENST00000262186 ACIN1Q9UKV3 1341 aaKnown RBP28.4■■■□□ 2.14
KCNH2-201ENST00000262186 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.14
KCNH2-201ENST00000262186 SLC4A1APQ9BWU0 796 aaKnown RBP28.39■■■□□ 2.14
KCNH2-201ENST00000262186 GOLGA3Q08378 1498 aa28.37■■■□□ 2.13
KCNH2-201ENST00000262186 WIZO95785 1651 aa28.35■■■□□ 2.13
KCNH2-201ENST00000262186 ANP32CO43423 234 aa28.33■■■□□ 2.13
KCNH2-201ENST00000262186 DDX10Q13206 875 aaKnown RBP28.32■■■□□ 2.12
KCNH2-201ENST00000262186 TNIKQ9UKE5 1360 aa28.32■■■□□ 2.12
KCNH2-201ENST00000262186 EEA1Q15075 1411 aa28.25■■■□□ 2.11
KCNH2-201ENST00000262186 MIER1Q8N108 512 aa28.24■■■□□ 2.11
KCNH2-201ENST00000262186 MTUS2Q5JR59 1369 aa28.18■■■□□ 2.1
KCNH2-201ENST00000262186 RRP7BPQ9NSQ0 103 aa28.16■■■□□ 2.1
KCNH2-201ENST00000262186 CDK11AQ9UQ88 783 aaPredicted RBP28.15■■■□□ 2.1
KCNH2-201ENST00000262186 KIF27Q86VH2 1401 aa28.13■■■□□ 2.09
KCNH2-201ENST00000262186 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
KCNH2-201ENST00000262186 TONSLQ96HA7 1378 aa28.13■■■□□ 2.09
KCNH2-201ENST00000262186 CHMP7Q8WUX9 453 aaPredicted RBP28.09■■■□□ 2.09
KCNH2-201ENST00000262186 KANK4Q5T7N3 995 aaPredicted RBP28.03■■■□□ 2.08
KCNH2-201ENST00000262186 SCAF1Q9H7N4 1312 aaKnown RBP28.03■■■□□ 2.08
KCNH2-201ENST00000262186 RUSC2Q8N2Y8 1516 aa28.01■■■□□ 2.07
KCNH2-201ENST00000262186 SIN3AQ96ST3 1273 aa27.98■■■□□ 2.07
KCNH2-201ENST00000262186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.98■■■□□ 2.07
KCNH2-201ENST00000262186 CUX2O14529 1486 aa27.95■■■□□ 2.07
KCNH2-201ENST00000262186 KDM2AQ9Y2K7 1162 aa27.9■■■□□ 2.06
KCNH2-201ENST00000262186 CARMIL1Q5VZK9 1371 aa27.88■■■□□ 2.05
KCNH2-201ENST00000262186 FAM9BQ8IZU0 186 aa27.86■■■□□ 2.05
KCNH2-201ENST00000262186 SENP3-EIF4A1A0A087X0R7 540 aa27.86■■■□□ 2.05
KCNH2-201ENST00000262186 TOP2AP11388 1531 aaKnown RBP27.84■■■□□ 2.05
KCNH2-201ENST00000262186 HNRNPUQ00839 825 aaKnown RBP eCLIP27.84■■■□□ 2.05
KCNH2-201ENST00000262186 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
KCNH2-201ENST00000262186 SALL2Q9Y467 1007 aaPredicted RBP27.82■■■□□ 2.04
KCNH2-201ENST00000262186 FKBP8Q14318 412 aa27.81■■■□□ 2.04
KCNH2-201ENST00000262186 CHGAP10645 457 aaKnown RBP27.78■■■□□ 2.04
KCNH2-201ENST00000262186 TDRD9Q8NDG6 1382 aaKnown RBP27.77■■■□□ 2.04
KCNH2-201ENST00000262186 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms