RNA–Protein interactions for RNA: ENST00000407684.1

GAREM2-202, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

TSL 2 BASIC

Gene GAREM2, Length 5,138 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-202ENST00000407684 NISCHQ9Y2I1 1504 aa33.91■■■■□ 3.02
GAREM2-202ENST00000407684 DCAF8L2P0C7V8 631 aa31.09■■■□□ 2.57
GAREM2-202ENST00000407684 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
GAREM2-202ENST00000407684 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
GAREM2-202ENST00000407684 CCDC180Q9P1Z9 1646 aa28.85■■■□□ 2.21
GAREM2-202ENST00000407684 ABCC9O60706 1549 aa28.66■■■□□ 2.18
GAREM2-202ENST00000407684 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.12
GAREM2-202ENST00000407684 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
GAREM2-202ENST00000407684 SCRIBQ14160 1630 aa27.54■■■□□ 2
GAREM2-202ENST00000407684 EHMT2Q96KQ7 1210 aa27.53■■■□□ 2
GAREM2-202ENST00000407684 DCAF1Q9Y4B6 1507 aa27.51■■□□□ 1.99
GAREM2-202ENST00000407684 RB1CC1Q8TDY2 1594 aa27.5■■□□□ 1.99
GAREM2-202ENST00000407684 NACADO15069 1562 aa27.5■■□□□ 1.99
GAREM2-202ENST00000407684 TRIM41Q8WV44 630 aa27.44■■□□□ 1.98
GAREM2-202ENST00000407684 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
GAREM2-202ENST00000407684 APLP2Q06481 763 aa27.07■■□□□ 1.92
GAREM2-202ENST00000407684 MYO15BQ96JP2 1530 aa27.03■■□□□ 1.92
GAREM2-202ENST00000407684 PELP1Q8IZL8 1130 aaKnown RBP27.01■■□□□ 1.91
GAREM2-202ENST00000407684 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
GAREM2-202ENST00000407684 PCGF6Q9BYE7 350 aa26.87■■□□□ 1.89
GAREM2-202ENST00000407684 UBTFP17480 764 aaKnown RBP26.7■■□□□ 1.87
GAREM2-202ENST00000407684 HRCP23327 699 aa26.63■■□□□ 1.85
GAREM2-202ENST00000407684 RSF1Q96T23 1441 aaPredicted RBP26.63■■□□□ 1.85
GAREM2-202ENST00000407684 TTBK1Q5TCY1 1321 aaPredicted RBP26.62■■□□□ 1.85
GAREM2-202ENST00000407684 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
GAREM2-202ENST00000407684 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
GAREM2-202ENST00000407684 CECR2Q9BXF3 1484 aa26.4■■□□□ 1.82
GAREM2-202ENST00000407684 MYT1Q01538 1121 aa26.36■■□□□ 1.81
GAREM2-202ENST00000407684 LOC105371045A0A1W2PR82 267 aa26.33■■□□□ 1.81
GAREM2-202ENST00000407684 ZEB1P37275 1124 aaPredicted RBP26.33■■□□□ 1.81
GAREM2-202ENST00000407684 BAZ1BQ9UIG0 1483 aaKnown RBP26.24■■□□□ 1.79
GAREM2-202ENST00000407684 CCER1Q8TC90 406 aaPredicted RBP26.23■■□□□ 1.79
GAREM2-202ENST00000407684 ATP1B4Q9UN42 357 aaPredicted RBP26.18■■□□□ 1.78
GAREM2-202ENST00000407684 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
GAREM2-202ENST00000407684 CENPBP07199 599 aaPredicted RBP26.12■■□□□ 1.77
GAREM2-202ENST00000407684 PPARGC1BQ86YN6 1023 aaKnown RBP25.98■■□□□ 1.75
GAREM2-202ENST00000407684 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
GAREM2-202ENST00000407684 CSRNP3Q8WYN3 585 aa25.95■■□□□ 1.74
GAREM2-202ENST00000407684 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
GAREM2-202ENST00000407684 ERICH6Q7L0X2 663 aa25.84■■□□□ 1.73
GAREM2-202ENST00000407684 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
GAREM2-202ENST00000407684 WIZO95785 1651 aa25.82■■□□□ 1.72
GAREM2-202ENST00000407684 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
GAREM2-202ENST00000407684 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
GAREM2-202ENST00000407684 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
GAREM2-202ENST00000407684 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
GAREM2-202ENST00000407684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.6■■□□□ 1.69
GAREM2-202ENST00000407684 HNRNPUL2Q1KMD3 747 aaKnown RBP25.6■■□□□ 1.69
GAREM2-202ENST00000407684 EEA1Q15075 1411 aa25.59■■□□□ 1.69
GAREM2-202ENST00000407684 YTHDC1Q96MU7 727 aaKnown RBP25.58■■□□□ 1.69
GAREM2-202ENST00000407684 FBLN2P98095 1184 aa25.53■■□□□ 1.68
GAREM2-202ENST00000407684 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
GAREM2-202ENST00000407684 NEFLP07196 543 aa25.41■■□□□ 1.66
GAREM2-202ENST00000407684 BICRAQ9NZM4 1560 aa25.41■■□□□ 1.66
GAREM2-202ENST00000407684 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
GAREM2-202ENST00000407684 KIF27Q86VH2 1401 aa25.37■■□□□ 1.65
GAREM2-202ENST00000407684 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
GAREM2-202ENST00000407684 ITGAEP38570 1179 aa25.32■■□□□ 1.64
GAREM2-202ENST00000407684 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
GAREM2-202ENST00000407684 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
GAREM2-202ENST00000407684 GOLGA3Q08378 1498 aa25.29■■□□□ 1.64
GAREM2-202ENST00000407684 P3H3Q8IVL6 736 aa25.28■■□□□ 1.64
GAREM2-202ENST00000407684 ABCC8Q09428 1581 aa25.28■■□□□ 1.64
GAREM2-202ENST00000407684 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
GAREM2-202ENST00000407684 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
GAREM2-202ENST00000407684 SOGA1O94964 1423 aa25.14■■□□□ 1.61
GAREM2-202ENST00000407684 CLIP1P30622 1438 aa25.14■■□□□ 1.61
GAREM2-202ENST00000407684 CHMP7Q8WUX9 453 aaPredicted RBP25.12■■□□□ 1.61
GAREM2-202ENST00000407684 FAM50AQ14320 339 aaKnown RBP25.12■■□□□ 1.61
GAREM2-202ENST00000407684 TNIKQ9UKE5 1360 aa25.11■■□□□ 1.61
GAREM2-202ENST00000407684 SCAF1Q9H7N4 1312 aaKnown RBP25.11■■□□□ 1.61
GAREM2-202ENST00000407684 CUX2O14529 1486 aa25.1■■□□□ 1.61
GAREM2-202ENST00000407684 HMGXB3Q12766 1538 aa25.1■■□□□ 1.61
GAREM2-202ENST00000407684 CEP162Q5TB80 1403 aa25.06■■□□□ 1.6
GAREM2-202ENST00000407684 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
GAREM2-202ENST00000407684 MYT1LQ9UL68 1186 aa25.02■■□□□ 1.6
GAREM2-202ENST00000407684 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
GAREM2-202ENST00000407684 CDK11AQ9UQ88 783 aaPredicted RBP25■■□□□ 1.59
GAREM2-202ENST00000407684 CARMIL1Q5VZK9 1371 aa24.97■■□□□ 1.59
GAREM2-202ENST00000407684 ARID3CA6NKF2 412 aa24.92■■□□□ 1.58
GAREM2-202ENST00000407684 PEG3Q9GZU2 1588 aa24.88■■□□□ 1.57
GAREM2-202ENST00000407684 GTF3C3Q9Y5Q9 886 aa24.88■■□□□ 1.57
GAREM2-202ENST00000407684 ACIN1Q9UKV3 1341 aaKnown RBP24.88■■□□□ 1.57
GAREM2-202ENST00000407684 CFTRP13569 1480 aa24.87■■□□□ 1.57
GAREM2-202ENST00000407684 POLR3GLQ9BT43 218 aa24.84■■□□□ 1.57
GAREM2-202ENST00000407684 DIEXFQ68CQ4 756 aaKnown RBP24.82■■□□□ 1.56
GAREM2-202ENST00000407684 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
GAREM2-202ENST00000407684 MTUS2Q5JR59 1369 aa24.71■■□□□ 1.55
GAREM2-202ENST00000407684 TRIM52Q96A61 297 aa24.7■■□□□ 1.55
GAREM2-202ENST00000407684 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
GAREM2-202ENST00000407684 RAPGEF2Q9Y4G8 1499 aa24.65■■□□□ 1.54
GAREM2-202ENST00000407684 NPM1P06748 294 aaKnown RBP eCLIP24.64■■□□□ 1.53
GAREM2-202ENST00000407684 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
GAREM2-202ENST00000407684 FHAD1B1AJZ9 1412 aa24.63■■□□□ 1.53
GAREM2-202ENST00000407684 CNGB1Q14028 1251 aaPredicted RBP24.62■■□□□ 1.53
GAREM2-202ENST00000407684 ZNF777Q9ULD5 760 aaPredicted RBP24.62■■□□□ 1.53
GAREM2-202ENST00000407684 DAXXQ9UER7 740 aaPredicted RBP24.61■■□□□ 1.53
GAREM2-202ENST00000407684 NESP48681 1621 aa24.6■■□□□ 1.53
GAREM2-202ENST00000407684 NEUROD1Q13562 356 aa24.55■■□□□ 1.52
GAREM2-202ENST00000407684 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms