RNA–Protein interactions for RNA: ENST00000377636.7

TBC1D4-202, Transcript of TBC1 domain family member 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TBC1D4, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-202ENST00000377636 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
TBC1D4-202ENST00000377636 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
TBC1D4-202ENST00000377636 EHMT2Q96KQ7 1210 aa27.61■■■□□ 2.01
TBC1D4-202ENST00000377636 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
TBC1D4-202ENST00000377636 PELP1Q8IZL8 1130 aaKnown RBP27.34■■□□□ 1.97
TBC1D4-202ENST00000377636 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
TBC1D4-202ENST00000377636 APLP2Q06481 763 aa27.05■■□□□ 1.92
TBC1D4-202ENST00000377636 TTBK1Q5TCY1 1321 aaPredicted RBP26.7■■□□□ 1.86
TBC1D4-202ENST00000377636 FAM9AQ8IZU1 332 aaPredicted RBP26.69■■□□□ 1.86
TBC1D4-202ENST00000377636 PCGF6Q9BYE7 350 aa26.42■■□□□ 1.82
TBC1D4-202ENST00000377636 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
TBC1D4-202ENST00000377636 ERICH6Q7L0X2 663 aa26.32■■□□□ 1.8
TBC1D4-202ENST00000377636 CENPBP07199 599 aaPredicted RBP26.19■■□□□ 1.78
TBC1D4-202ENST00000377636 ATP1B4Q9UN42 357 aaPredicted RBP26.16■■□□□ 1.78
TBC1D4-202ENST00000377636 CCER1Q8TC90 406 aaPredicted RBP26.13■■□□□ 1.77
TBC1D4-202ENST00000377636 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
TBC1D4-202ENST00000377636 ZEB1P37275 1124 aaPredicted RBP25.98■■□□□ 1.75
TBC1D4-202ENST00000377636 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
TBC1D4-202ENST00000377636 NEFLP07196 543 aa25.78■■□□□ 1.72
TBC1D4-202ENST00000377636 YTHDC1Q96MU7 727 aaKnown RBP25.74■■□□□ 1.71
TBC1D4-202ENST00000377636 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
TBC1D4-202ENST00000377636 MYT1LQ9UL68 1186 aa25.24■■□□□ 1.63
TBC1D4-202ENST00000377636 POLR3GLQ9BT43 218 aa25.23■■□□□ 1.63
TBC1D4-202ENST00000377636 ITGAEP38570 1179 aa25.2■■□□□ 1.62
TBC1D4-202ENST00000377636 MYT1Q01538 1121 aa25.18■■□□□ 1.62
TBC1D4-202ENST00000377636 DAXXQ9UER7 740 aaPredicted RBP25.18■■□□□ 1.62
TBC1D4-202ENST00000377636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.15■■□□□ 1.62
TBC1D4-202ENST00000377636 HNRNPUL2Q1KMD3 747 aaKnown RBP25.15■■□□□ 1.62
TBC1D4-202ENST00000377636 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
TBC1D4-202ENST00000377636 CNGB1Q14028 1251 aaPredicted RBP25.02■■□□□ 1.6
TBC1D4-202ENST00000377636 HRCP23327 699 aa24.92■■□□□ 1.58
TBC1D4-202ENST00000377636 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
TBC1D4-202ENST00000377636 SLC4A1APQ9BWU0 796 aaKnown RBP24.8■■□□□ 1.56
TBC1D4-202ENST00000377636 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
TBC1D4-202ENST00000377636 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
TBC1D4-202ENST00000377636 ZNF316A6NFI3 1004 aaPredicted RBP24.57■■□□□ 1.52
TBC1D4-202ENST00000377636 RTL5Q5HYW3 569 aaPredicted RBP24.51■■□□□ 1.51
TBC1D4-202ENST00000377636 FAM50AQ14320 339 aaKnown RBP24.45■■□□□ 1.5
TBC1D4-202ENST00000377636 DIEXFQ68CQ4 756 aaKnown RBP24.43■■□□□ 1.5
TBC1D4-202ENST00000377636 TRIM52Q96A61 297 aa24.38■■□□□ 1.49
TBC1D4-202ENST00000377636 NEUROD1Q13562 356 aa24.29■■□□□ 1.48
TBC1D4-202ENST00000377636 BCANQ96GW7 911 aa24.2■■□□□ 1.47
TBC1D4-202ENST00000377636 ZNF326Q5BKZ1 582 aaKnown RBP24.19■■□□□ 1.46
TBC1D4-202ENST00000377636 ZBTB47Q9UFB7 747 aaPredicted RBP24.11■■□□□ 1.45
TBC1D4-202ENST00000377636 ANP32CO43423 234 aa24.08■■□□□ 1.44
TBC1D4-202ENST00000377636 BCL11AQ9H165 835 aa24.02■■□□□ 1.44
TBC1D4-202ENST00000377636 SLC24A1O60721 1099 aa24.01■■□□□ 1.43
TBC1D4-202ENST00000377636 CDK11AQ9UQ88 783 aaPredicted RBP23.99■■□□□ 1.43
TBC1D4-202ENST00000377636 PABPN1Q86U42 306 aaKnown RBP eCLIP23.99■■□□□ 1.43
TBC1D4-202ENST00000377636 GTF3C3Q9Y5Q9 886 aa23.97■■□□□ 1.43
TBC1D4-202ENST00000377636 CANXP27824 592 aaKnown RBP23.95■■□□□ 1.42
TBC1D4-202ENST00000377636 FBLN2P98095 1184 aa23.95■■□□□ 1.42
TBC1D4-202ENST00000377636 NEFMP07197 916 aa23.83■■□□□ 1.4
TBC1D4-202ENST00000377636 ARID3CA6NKF2 412 aa23.77■■□□□ 1.4
TBC1D4-202ENST00000377636 ABCC9O60706 1549 aa23.74■■□□□ 1.39
TBC1D4-202ENST00000377636 P3H3Q8IVL6 736 aa23.72■■□□□ 1.39
TBC1D4-202ENST00000377636 ZNF777Q9ULD5 760 aaPredicted RBP23.64■■□□□ 1.37
TBC1D4-202ENST00000377636 ANP32AP39687 249 aaKnown RBP23.63■■□□□ 1.37
TBC1D4-202ENST00000377636 NPM2Q86SE8 214 aaKnown RBP23.61■■□□□ 1.37
TBC1D4-202ENST00000377636 ACIN1Q9UKV3 1341 aaKnown RBP23.47■■□□□ 1.35
TBC1D4-202ENST00000377636 CSRNP3Q8WYN3 585 aa23.44■■□□□ 1.34
TBC1D4-202ENST00000377636 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
TBC1D4-202ENST00000377636 CHGAP10645 457 aaKnown RBP23.43■■□□□ 1.34
TBC1D4-202ENST00000377636 HSP90AA1P07900 732 aaKnown RBP23.42■■□□□ 1.34
TBC1D4-202ENST00000377636 ANP32BQ92688 251 aaKnown RBP23.38■■□□□ 1.33
TBC1D4-202ENST00000377636 STAG3Q9UJ98 1225 aa23.38■■□□□ 1.33
TBC1D4-202ENST00000377636 FKBP8Q14318 412 aa23.37■■□□□ 1.33
TBC1D4-202ENST00000377636 PLPPR3Q6T4P5 718 aa23.34■■□□□ 1.33
TBC1D4-202ENST00000377636 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
TBC1D4-202ENST00000377636 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
TBC1D4-202ENST00000377636 FAM9BQ8IZU0 186 aa23.3■■□□□ 1.32
TBC1D4-202ENST00000377636 UPF2Q9HAU5 1272 aaKnown RBP23.3■■□□□ 1.32
TBC1D4-202ENST00000377636 SALL2Q9Y467 1007 aaPredicted RBP23.3■■□□□ 1.32
TBC1D4-202ENST00000377636 EIF5BO60841 1220 aaKnown RBP23.28■■□□□ 1.32
TBC1D4-202ENST00000377636 DDX10Q13206 875 aaKnown RBP23.23■■□□□ 1.31
TBC1D4-202ENST00000377636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.32e-8■□□□□ 11.2
TBC1D4-202ENST00000377636 TMC1Q8TDI8 760 aa23.13■■□□□ 1.29
TBC1D4-202ENST00000377636 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
TBC1D4-202ENST00000377636 CHIC2Q9UKJ5 165 aa23.12■■□□□ 1.29
TBC1D4-202ENST00000377636 CCDC136Q96JN2 1154 aa23.11■■□□□ 1.29
TBC1D4-202ENST00000377636 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.1■■□□□ 1.29
TBC1D4-202ENST00000377636 WDR43Q15061 677 aaKnown RBP eCLIP23.07■■□□□ 1.28
TBC1D4-202ENST00000377636 ARXQ96QS3 562 aa23.06■■□□□ 1.28
TBC1D4-202ENST00000377636 NBR1Q14596 966 aa23.04■■□□□ 1.28
TBC1D4-202ENST00000377636 KDM2AQ9Y2K7 1162 aa23.02■■□□□ 1.28
TBC1D4-202ENST00000377636 MRS2Q9HD23 443 aa22.99■■□□□ 1.27
TBC1D4-202ENST00000377636 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
TBC1D4-202ENST00000377636 TSPY4P0CV99 314 aa22.93■■□□□ 1.26
TBC1D4-202ENST00000377636 TSPY10P0CW01 314 aa22.93■■□□□ 1.26
TBC1D4-202ENST00000377636 A0A0G2JS52 829 aa22.91■■□□□ 1.26
TBC1D4-202ENST00000377636 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
TBC1D4-202ENST00000377636 MYH16Q9H6N6 1097 aa22.89■■□□□ 1.25
TBC1D4-202ENST00000377636 GLIPR1L2Q4G1C9 344 aa22.87■■□□□ 1.25
TBC1D4-202ENST00000377636 HIRIP3Q9BW71 556 aaPredicted RBP22.86■■□□□ 1.25
TBC1D4-202ENST00000377636 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
TBC1D4-202ENST00000377636 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
TBC1D4-202ENST00000377636 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
TBC1D4-202ENST00000377636 ZBTB7CA1YPR0 619 aa22.84■■□□□ 1.25
TBC1D4-202ENST00000377636 MTUS2Q5JR59 1369 aa22.82■■□□□ 1.24
TBC1D4-202ENST00000377636 CDK11BP21127 795 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms