Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 AC007950.2-201ENST00000615045 2347 ntBASIC15.27■□□□□ 0.03
NUP43Q8NFH3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUP43Q8NFH3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.26■□□□□ 0.03
NUP43Q8NFH3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 AC091812.2-201ENST00000619081 385 ntBASIC15.26■□□□□ 0.03
NUP43Q8NFH3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 CDC14C-201ENST00000428251 1719 ntBASIC15.26■□□□□ 0.03
NUP43Q8NFH3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUP43Q8NFH3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 LINC02447-202ENST00000501888 2146 ntBASIC15.25■□□□□ 0.03
NUP43Q8NFH3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 MIR574-201ENST00000385209 96 ntBASIC15.25■□□□□ 0.03
NUP43Q8NFH3 FAM58CP-201ENST00000435741 640 ntBASIC15.25■□□□□ 0.03
NUP43Q8NFH3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 POLD2P1-201ENST00000511220 997 ntBASIC15.25■□□□□ 0.03
NUP43Q8NFH3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 AC002347.1-201ENST00000569543 541 ntBASIC15.25■□□□□ 0.03
NUP43Q8NFH3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 AL365330.1-201ENST00000607459 531 ntBASIC15.25■□□□□ 0.03
NUP43Q8NFH3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 AL589702.1-201ENST00000641229 1509 ntBASIC15.25■□□□□ 0.03
NUP43Q8NFH3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.25■□□□□ 0.03
NUP43Q8NFH3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms