RNA–Protein interactions for RNA: ENST00000381718.7

NUP58-201, Transcript of nucleoporin 58, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene NUP58, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-201ENST00000381718 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
NUP58-201ENST00000381718 CCDC180Q9P1Z9 1646 aa30.86■■■□□ 2.53
NUP58-201ENST00000381718 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
NUP58-201ENST00000381718 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
NUP58-201ENST00000381718 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
NUP58-201ENST00000381718 DCAF8L2P0C7V8 631 aa29.22■■■□□ 2.27
NUP58-201ENST00000381718 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
NUP58-201ENST00000381718 ABCC9O60706 1549 aa28.71■■■□□ 2.19
NUP58-201ENST00000381718 NACADO15069 1562 aa28.64■■■□□ 2.17
NUP58-201ENST00000381718 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
NUP58-201ENST00000381718 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
NUP58-201ENST00000381718 RB1CC1Q8TDY2 1594 aa28.25■■■□□ 2.11
NUP58-201ENST00000381718 RSF1Q96T23 1441 aaPredicted RBP27.91■■■□□ 2.06
NUP58-201ENST00000381718 UNC13AQ9UPW8 1703 aa27.72■■■□□ 2.03
NUP58-201ENST00000381718 CECR2Q9BXF3 1484 aa27.71■■■□□ 2.03
NUP58-201ENST00000381718 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
NUP58-201ENST00000381718 MROH2BQ7Z745 1585 aa27.61■■■□□ 2.01
NUP58-201ENST00000381718 BAZ1AQ9NRL2 1556 aaPredicted RBP27.51■■□□□ 1.99
NUP58-201ENST00000381718 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
NUP58-201ENST00000381718 WIZO95785 1651 aa27.39■■□□□ 1.98
NUP58-201ENST00000381718 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
NUP58-201ENST00000381718 PABPN1Q86U42 306 aaKnown RBP eCLIP27.19■■□□□ 1.94
NUP58-201ENST00000381718 TOP2AP11388 1531 aaKnown RBP27.13■■□□□ 1.93
NUP58-201ENST00000381718 PEG3Q9GZU2 1588 aa27.02■■□□□ 1.92
NUP58-201ENST00000381718 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
NUP58-201ENST00000381718 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
NUP58-201ENST00000381718 CCDC88BA6NC98 1476 aa26.87■■□□□ 1.89
NUP58-201ENST00000381718 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
NUP58-201ENST00000381718 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
NUP58-201ENST00000381718 LOC105371045A0A1W2PR82 267 aa26.61■■□□□ 1.85
NUP58-201ENST00000381718 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
NUP58-201ENST00000381718 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
NUP58-201ENST00000381718 HMGXB3Q12766 1538 aa26.45■■□□□ 1.83
NUP58-201ENST00000381718 ABCC8Q09428 1581 aa26.45■■□□□ 1.82
NUP58-201ENST00000381718 FAM9AQ8IZU1 332 aaPredicted RBP26.32■■□□□ 1.8
NUP58-201ENST00000381718 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
NUP58-201ENST00000381718 EEA1Q15075 1411 aa26.12■■□□□ 1.77
NUP58-201ENST00000381718 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
NUP58-201ENST00000381718 SOGA1O94964 1423 aa26.08■■□□□ 1.77
NUP58-201ENST00000381718 CFTRP13569 1480 aa26.02■■□□□ 1.76
NUP58-201ENST00000381718 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
NUP58-201ENST00000381718 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
NUP58-201ENST00000381718 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.75
NUP58-201ENST00000381718 BIVM-ERCC5R4GMW8 1640 aa25.93■■□□□ 1.74
NUP58-201ENST00000381718 CSRNP3Q8WYN3 585 aa25.92■■□□□ 1.74
NUP58-201ENST00000381718 PCGF6Q9BYE7 350 aa25.91■■□□□ 1.74
NUP58-201ENST00000381718 EHMT2Q96KQ7 1210 aa25.9■■□□□ 1.74
NUP58-201ENST00000381718 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
NUP58-201ENST00000381718 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
NUP58-201ENST00000381718 CADPSQ9ULU8 1353 aa25.8■■□□□ 1.72
NUP58-201ENST00000381718 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
NUP58-201ENST00000381718 CUX1P39880 1505 aa25.78■■□□□ 1.72
NUP58-201ENST00000381718 GOLGA3Q08378 1498 aa25.77■■□□□ 1.72
NUP58-201ENST00000381718 KIF21BO75037 1637 aa25.76■■□□□ 1.71
NUP58-201ENST00000381718 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
NUP58-201ENST00000381718 CEP162Q5TB80 1403 aa25.7■■□□□ 1.7
NUP58-201ENST00000381718 HRCP23327 699 aa25.61■■□□□ 1.69
NUP58-201ENST00000381718 UBTFP17480 764 aaKnown RBP25.58■■□□□ 1.69
NUP58-201ENST00000381718 RAPGEF2Q9Y4G8 1499 aa25.52■■□□□ 1.68
NUP58-201ENST00000381718 PRXQ9BXM0 1461 aa25.52■■□□□ 1.68
NUP58-201ENST00000381718 KIF27Q86VH2 1401 aa25.51■■□□□ 1.67
NUP58-201ENST00000381718 FANCD2Q9BXW9 1451 aa25.5■■□□□ 1.67
NUP58-201ENST00000381718 ERICH3Q5RHP9 1530 aa25.5■■□□□ 1.67
NUP58-201ENST00000381718 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
NUP58-201ENST00000381718 NESP48681 1621 aa25.4■■□□□ 1.66
NUP58-201ENST00000381718 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
NUP58-201ENST00000381718 CLIP1P30622 1438 aa25.37■■□□□ 1.65
NUP58-201ENST00000381718 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
NUP58-201ENST00000381718 CUX2O14529 1486 aa25.32■■□□□ 1.64
NUP58-201ENST00000381718 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
NUP58-201ENST00000381718 IGF1RP08069 1367 aa25.27■■□□□ 1.64
NUP58-201ENST00000381718 PPARGC1BQ86YN6 1023 aaKnown RBP25.26■■□□□ 1.63
NUP58-201ENST00000381718 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
NUP58-201ENST00000381718 VPS8Q8N3P4 1428 aa25.24■■□□□ 1.63
NUP58-201ENST00000381718 POLA1P09884 1462 aaPredicted RBP25.22■■□□□ 1.63
NUP58-201ENST00000381718 PDS5BQ9NTI5 1447 aa25.22■■□□□ 1.63
NUP58-201ENST00000381718 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
NUP58-201ENST00000381718 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
NUP58-201ENST00000381718 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
NUP58-201ENST00000381718 CARMIL1Q5VZK9 1371 aa25.12■■□□□ 1.61
NUP58-201ENST00000381718 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
NUP58-201ENST00000381718 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
NUP58-201ENST00000381718 WDR97A6NE52 1622 aa25.07■■□□□ 1.6
NUP58-201ENST00000381718 ZEB1P37275 1124 aaPredicted RBP25.02■■□□□ 1.6
NUP58-201ENST00000381718 ARHGAP35Q9NRY4 1499 aa25■■□□□ 1.59
NUP58-201ENST00000381718 CUL7Q14999 1698 aa24.98■■□□□ 1.59
NUP58-201ENST00000381718 RANGAP1P46060 587 aaPredicted RBP24.97■■□□□ 1.59
NUP58-201ENST00000381718 ABCA5Q8WWZ7 1642 aa24.96■■□□□ 1.59
NUP58-201ENST00000381718 TTBK1Q5TCY1 1321 aaPredicted RBP24.92■■□□□ 1.58
NUP58-201ENST00000381718 APLP2Q06481 763 aa24.91■■□□□ 1.58
NUP58-201ENST00000381718 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.58
NUP58-201ENST00000381718 MRC2Q9UBG0 1479 aa24.87■■□□□ 1.57
NUP58-201ENST00000381718 GAPVD1Q14C86 1478 aa24.86■■□□□ 1.57
NUP58-201ENST00000381718 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
NUP58-201ENST00000381718 CTTNBP2Q8WZ74 1663 aa24.76■■□□□ 1.55
NUP58-201ENST00000381718 WDR62O43379 1518 aa24.75■■□□□ 1.55
NUP58-201ENST00000381718 MAP3K1Q13233 1512 aa24.74■■□□□ 1.55
NUP58-201ENST00000381718 EFCAB5A4FU69 1503 aa24.74■■□□□ 1.55
NUP58-201ENST00000381718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.71■■□□□ 1.55
NUP58-201ENST00000381718 KANK4Q5T7N3 995 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms