RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 NISCHQ9Y2I1 1504 aa39.33■■■■□ 3.89
SNRPF-201ENST00000266735 CCDC180Q9P1Z9 1646 aa34.75■■■■□ 3.15
SNRPF-201ENST00000266735 ABCC9O60706 1549 aa33.72■■■□□ 2.99
SNRPF-201ENST00000266735 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
SNRPF-201ENST00000266735 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
SNRPF-201ENST00000266735 NACADO15069 1562 aa32.65■■■□□ 2.82
SNRPF-201ENST00000266735 MYO15BQ96JP2 1530 aa32.61■■■□□ 2.81
SNRPF-201ENST00000266735 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
SNRPF-201ENST00000266735 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
SNRPF-201ENST00000266735 SCRIBQ14160 1630 aa31.74■■■□□ 2.67
SNRPF-201ENST00000266735 UNC13AQ9UPW8 1703 aa31.68■■■□□ 2.66
SNRPF-201ENST00000266735 PABPN1Q86U42 306 aaKnown RBP eCLIP31.59■■■□□ 2.65
SNRPF-201ENST00000266735 BICRAQ9NZM4 1560 aa31.55■■■□□ 2.64
SNRPF-201ENST00000266735 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
SNRPF-201ENST00000266735 EIF4G1Q04637 1599 aaKnown RBP30.72■■■□□ 2.51
SNRPF-201ENST00000266735 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
SNRPF-201ENST00000266735 CECR2Q9BXF3 1484 aa30.59■■■□□ 2.49
SNRPF-201ENST00000266735 CC2D2AQ9P2K1 1620 aa30.48■■■□□ 2.47
SNRPF-201ENST00000266735 BAZ1AQ9NRL2 1556 aaPredicted RBP30.47■■■□□ 2.47
SNRPF-201ENST00000266735 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
SNRPF-201ENST00000266735 AEBP2Q6ZN18 517 aaPredicted RBP30.4■■■□□ 2.46
SNRPF-201ENST00000266735 MROH2BQ7Z745 1585 aa30.3■■■□□ 2.44
SNRPF-201ENST00000266735 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
SNRPF-201ENST00000266735 SMARCA2P51531 1590 aa30.18■■■□□ 2.42
SNRPF-201ENST00000266735 NCAPD3P42695 1498 aa30.15■■■□□ 2.42
SNRPF-201ENST00000266735 PEG3Q9GZU2 1588 aa30.13■■■□□ 2.41
SNRPF-201ENST00000266735 RSF1Q96T23 1441 aaPredicted RBP30.12■■■□□ 2.41
SNRPF-201ENST00000266735 HMGXB3Q12766 1538 aa30.01■■■□□ 2.39
SNRPF-201ENST00000266735 BAZ1BQ9UIG0 1483 aaKnown RBP29.98■■■□□ 2.39
SNRPF-201ENST00000266735 WIZO95785 1651 aa29.93■■■□□ 2.38
SNRPF-201ENST00000266735 TOP2AP11388 1531 aaKnown RBP29.71■■■□□ 2.35
SNRPF-201ENST00000266735 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
SNRPF-201ENST00000266735 CCDC88BA6NC98 1476 aa29.35■■■□□ 2.29
SNRPF-201ENST00000266735 CADPSQ9ULU8 1353 aa29.3■■■□□ 2.28
SNRPF-201ENST00000266735 NESP48681 1621 aa29.26■■■□□ 2.27
SNRPF-201ENST00000266735 LAMC3Q9Y6N6 1575 aa29.26■■■□□ 2.27
SNRPF-201ENST00000266735 CFTRP13569 1480 aa29.19■■■□□ 2.26
SNRPF-201ENST00000266735 PDS5BQ9NTI5 1447 aa29.1■■■□□ 2.25
SNRPF-201ENST00000266735 ERCC6Q03468 1493 aa29.06■■■□□ 2.24
SNRPF-201ENST00000266735 FANCD2Q9BXW9 1451 aa28.94■■■□□ 2.22
SNRPF-201ENST00000266735 CEP164Q9UPV0 1460 aa28.88■■■□□ 2.21
SNRPF-201ENST00000266735 KIF21AQ7Z4S6 1674 aa28.84■■■□□ 2.21
SNRPF-201ENST00000266735 PRDM2Q13029 1718 aa28.81■■■□□ 2.2
SNRPF-201ENST00000266735 MRC2Q9UBG0 1479 aa28.76■■■□□ 2.19
SNRPF-201ENST00000266735 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
SNRPF-201ENST00000266735 THOC2Q8NI27 1593 aaKnown RBP28.72■■■□□ 2.19
SNRPF-201ENST00000266735 CUX2O14529 1486 aa28.64■■■□□ 2.18
SNRPF-201ENST00000266735 WDR62O43379 1518 aa28.64■■■□□ 2.18
SNRPF-201ENST00000266735 URB2Q14146 1524 aaKnown RBP28.6■■■□□ 2.17
SNRPF-201ENST00000266735 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
SNRPF-201ENST00000266735 TOPBP1Q92547 1522 aa28.5■■■□□ 2.15
SNRPF-201ENST00000266735 DNMBPQ6XZF7 1577 aa28.49■■■□□ 2.15
SNRPF-201ENST00000266735 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
SNRPF-201ENST00000266735 CUX1P39880 1505 aa28.4■■■□□ 2.14
SNRPF-201ENST00000266735 POLA1P09884 1462 aaPredicted RBP28.29■■■□□ 2.12
SNRPF-201ENST00000266735 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
SNRPF-201ENST00000266735 FGD5Q6ZNL6 1462 aa28.27■■■□□ 2.12
SNRPF-201ENST00000266735 TOP2BQ02880 1626 aa28.24■■■□□ 2.11
SNRPF-201ENST00000266735 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
SNRPF-201ENST00000266735 BIVM-ERCC5R4GMW8 1640 aa28.21■■■□□ 2.11
SNRPF-201ENST00000266735 SOGA1O94964 1423 aa28.2■■■□□ 2.1
SNRPF-201ENST00000266735 RAD54L2Q9Y4B4 1467 aa28.15■■■□□ 2.1
SNRPF-201ENST00000266735 TARBP1Q13395 1621 aaKnown RBP28.12■■■□□ 2.09
SNRPF-201ENST00000266735 ZNF608Q9ULD9 1512 aaPredicted RBP28.07■■■□□ 2.08
SNRPF-201ENST00000266735 ABCA10Q8WWZ4 1543 aa28.03■■■□□ 2.08
SNRPF-201ENST00000266735 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
SNRPF-201ENST00000266735 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
SNRPF-201ENST00000266735 AQRO60306 1485 aaKnown RBP eCLIP27.97■■■□□ 2.072e-6■■□□□ 11.9
SNRPF-201ENST00000266735 WDR97A6NE52 1622 aa27.97■■■□□ 2.07
SNRPF-201ENST00000266735 EIF4G3O43432 1585 aaKnown RBP27.95■■■□□ 2.06
SNRPF-201ENST00000266735 GAPVD1Q14C86 1478 aa27.87■■■□□ 2.05
SNRPF-201ENST00000266735 GRIN2BQ13224 1484 aa27.83■■■□□ 2.05
SNRPF-201ENST00000266735 ABCA5Q8WWZ7 1642 aa27.83■■■□□ 2.05
SNRPF-201ENST00000266735 KIF27Q86VH2 1401 aa27.79■■■□□ 2.04
SNRPF-201ENST00000266735 SNAPC4Q5SXM2 1469 aa27.73■■■□□ 2.03
SNRPF-201ENST00000266735 MAGI1Q96QZ7 1491 aaPredicted RBP27.72■■■□□ 2.03
SNRPF-201ENST00000266735 ERICH3Q5RHP9 1530 aa27.69■■■□□ 2.02
SNRPF-201ENST00000266735 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
SNRPF-201ENST00000266735 IGF1RP08069 1367 aa27.63■■■□□ 2.01
SNRPF-201ENST00000266735 SYNJ2O15056 1496 aa27.61■■■□□ 2.01
SNRPF-201ENST00000266735 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
SNRPF-201ENST00000266735 FHAD1B1AJZ9 1412 aa27.59■■■□□ 2.01
SNRPF-201ENST00000266735 FBLN2P98095 1184 aa27.59■■■□□ 2.01
SNRPF-201ENST00000266735 RUSC2Q8N2Y8 1516 aa27.58■■■□□ 2.01
SNRPF-201ENST00000266735 ADAMTS12P58397 1594 aa27.56■■■□□ 2
SNRPF-201ENST00000266735 OSCARQ8IYS5 282 aa27.54■■■□□ 2
SNRPF-201ENST00000266735 EEA1Q15075 1411 aa27.5■■□□□ 1.99
SNRPF-201ENST00000266735 CARMIL1Q5VZK9 1371 aa27.47■■□□□ 1.99
SNRPF-201ENST00000266735 CUL7Q14999 1698 aa27.46■■□□□ 1.99
SNRPF-201ENST00000266735 GRIN2AQ12879 1464 aa27.46■■□□□ 1.99
SNRPF-201ENST00000266735 CHD1O14646 1710 aa27.45■■□□□ 1.98
SNRPF-201ENST00000266735 CSRNP3Q8WYN3 585 aa27.41■■□□□ 1.98
SNRPF-201ENST00000266735 FAM9AQ8IZU1 332 aaPredicted RBP27.35■■□□□ 1.97
SNRPF-201ENST00000266735 DNAJC5Q9H3Z4 198 aa27.35■■□□□ 1.97
SNRPF-201ENST00000266735 NUP160Q12769 1436 aa27.35■■□□□ 1.97
SNRPF-201ENST00000266735 RAPGEF2Q9Y4G8 1499 aa27.34■■□□□ 1.97
SNRPF-201ENST00000266735 PRXQ9BXM0 1461 aa27.33■■□□□ 1.97
SNRPF-201ENST00000266735 CLASP1Q7Z460 1538 aa27.27■■□□□ 1.96
SNRPF-201ENST00000266735 CEP170Q5SW79 1584 aa27.26■■□□□ 1.96
SNRPF-201ENST00000266735 KIAA0586Q9BVV6 1533 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms