Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 FAM220CP-201ENST00000395253 831 ntBASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 AC128688.1-201ENST00000487626 519 ntBASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 AC007326.2-201ENST00000624224 7579 ntBASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 AC125634.1-201ENST00000438758 1403 ntBASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 AC233702.5-201ENST00000584107 538 ntBASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 AC232323.1-201ENST00000540724 2099 ntBASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 REXO1L5P-201ENST00000622260 2098 ntBASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 OR2I1P-209ENST00000641730 5365 ntBASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC22CQ9BRL7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 LINC01144-201ENST00000626198 1710 ntBASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 AC005912.2-201ENST00000619492 2400 ntBASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 AC097376.2-205ENST00000610159 5334 ntBASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
SEC22CQ9BRL7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms