RNA–Protein interactions for RNA: ENST00000518983.1

IKBKB-210, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2 BASIC

Gene IKBKB, Length 447 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-210ENST00000518983 NISCHQ9Y2I1 1504 aa46.7■■■■■ 5.07
IKBKB-210ENST00000518983 CCDC180Q9P1Z9 1646 aa41.73■■■■■ 4.27
IKBKB-210ENST00000518983 ABCC9O60706 1549 aa41.25■■■■■ 4.19
IKBKB-210ENST00000518983 RB1CC1Q8TDY2 1594 aa39.5■■■■□ 3.91
IKBKB-210ENST00000518983 DCAF8L2P0C7V8 631 aa39.35■■■■□ 3.89
IKBKB-210ENST00000518983 NACADO15069 1562 aa39.31■■■■□ 3.88
IKBKB-210ENST00000518983 MYO15BQ96JP2 1530 aa38.86■■■■□ 3.81
IKBKB-210ENST00000518983 ZCCHC6Q5VYS8 1495 aaKnown RBP38.81■■■■□ 3.8
IKBKB-210ENST00000518983 UNC13AQ9UPW8 1703 aa38.58■■■■□ 3.77
IKBKB-210ENST00000518983 DCAF1Q9Y4B6 1507 aa38.57■■■■□ 3.76
IKBKB-210ENST00000518983 PABPN1Q86U42 306 aaKnown RBP eCLIP38.48■■■■□ 3.75
IKBKB-210ENST00000518983 BICRAQ9NZM4 1560 aa38.23■■■■□ 3.71
IKBKB-210ENST00000518983 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
IKBKB-210ENST00000518983 DNAJC5BQ9UF47 199 aa38.1■■■■□ 3.69
IKBKB-210ENST00000518983 SHROOM4Q9ULL8 1493 aa37.8■■■■□ 3.64
IKBKB-210ENST00000518983 EIF4G1Q04637 1599 aaKnown RBP37.3■■■■□ 3.56
IKBKB-210ENST00000518983 CC2D2AQ9P2K1 1620 aa37.27■■■■□ 3.56
IKBKB-210ENST00000518983 CECR2Q9BXF3 1484 aa37.09■■■■□ 3.53
IKBKB-210ENST00000518983 SMARCA4P51532 1647 aa36.36■■■■□ 3.41
IKBKB-210ENST00000518983 BAZ1AQ9NRL2 1556 aaPredicted RBP36.27■■■■□ 3.4
IKBKB-210ENST00000518983 NCAPD3P42695 1498 aa36.23■■■■□ 3.39
IKBKB-210ENST00000518983 ATAD2BQ9ULI0 1458 aa36.22■■■■□ 3.39
IKBKB-210ENST00000518983 SMARCA2P51531 1590 aa36.2■■■■□ 3.39
IKBKB-210ENST00000518983 HMGXB3Q12766 1538 aa36.05■■■■□ 3.36
IKBKB-210ENST00000518983 MROH2BQ7Z745 1585 aa36■■■■□ 3.35
IKBKB-210ENST00000518983 BAZ1BQ9UIG0 1483 aaKnown RBP35.98■■■■□ 3.35
IKBKB-210ENST00000518983 PEG3Q9GZU2 1588 aa35.92■■■■□ 3.34
IKBKB-210ENST00000518983 ERCC6Q03468 1493 aa35.65■■■■□ 3.3
IKBKB-210ENST00000518983 WIZO95785 1651 aa35.63■■■■□ 3.29
IKBKB-210ENST00000518983 NESP48681 1621 aa35.54■■■■□ 3.28
IKBKB-210ENST00000518983 RSF1Q96T23 1441 aaPredicted RBP35.42■■■■□ 3.26
IKBKB-210ENST00000518983 LAMC3Q9Y6N6 1575 aa35.4■■■■□ 3.26
IKBKB-210ENST00000518983 CUX2O14529 1486 aa35.31■■■■□ 3.24
IKBKB-210ENST00000518983 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
IKBKB-210ENST00000518983 PDS5BQ9NTI5 1447 aa35.19■■■■□ 3.22
IKBKB-210ENST00000518983 CADPSQ9ULU8 1353 aa35.19■■■■□ 3.22
IKBKB-210ENST00000518983 KIF21AQ7Z4S6 1674 aa35.15■■■■□ 3.22
IKBKB-210ENST00000518983 THOC2Q8NI27 1593 aaKnown RBP35.08■■■■□ 3.21
IKBKB-210ENST00000518983 CFTRP13569 1480 aa34.87■■■■□ 3.17
IKBKB-210ENST00000518983 MRC2Q9UBG0 1479 aa34.85■■■■□ 3.17
IKBKB-210ENST00000518983 CEP164Q9UPV0 1460 aa34.85■■■■□ 3.17
IKBKB-210ENST00000518983 FANCD2Q9BXW9 1451 aa34.83■■■■□ 3.17
IKBKB-210ENST00000518983 CCDC88BA6NC98 1476 aa34.78■■■■□ 3.16
IKBKB-210ENST00000518983 WDR62O43379 1518 aa34.71■■■■□ 3.15
IKBKB-210ENST00000518983 PRDM2Q13029 1718 aa34.67■■■■□ 3.14
IKBKB-210ENST00000518983 DNAJC5Q9H3Z4 198 aa34.65■■■■□ 3.14
IKBKB-210ENST00000518983 URB2Q14146 1524 aaKnown RBP34.47■■■■□ 3.11
IKBKB-210ENST00000518983 SUPT5HO00267 1087 aaKnown RBP34.38■■■■□ 3.09
IKBKB-210ENST00000518983 TOPBP1Q92547 1522 aa34.21■■■■□ 3.07
IKBKB-210ENST00000518983 ABCC8Q09428 1581 aa34.2■■■■□ 3.07
IKBKB-210ENST00000518983 DNMBPQ6XZF7 1577 aa34.15■■■■□ 3.06
IKBKB-210ENST00000518983 IFT140Q96RY7 1462 aa34.1■■■■□ 3.05
IKBKB-210ENST00000518983 ZNF608Q9ULD9 1512 aaPredicted RBP33.97■■■■□ 3.03
IKBKB-210ENST00000518983 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
IKBKB-210ENST00000518983 EIF4G3O43432 1585 aaKnown RBP33.86■■■■□ 3.01
IKBKB-210ENST00000518983 TARBP1Q13395 1621 aaKnown RBP33.85■■■■□ 3.01
IKBKB-210ENST00000518983 CUX1P39880 1505 aa33.8■■■■□ 3
IKBKB-210ENST00000518983 OSCARQ8IYS5 282 aa33.8■■■■□ 3
IKBKB-210ENST00000518983 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
IKBKB-210ENST00000518983 SOGA1O94964 1423 aa33.77■■■■□ 3
IKBKB-210ENST00000518983 RAD54L2Q9Y4B4 1467 aa33.76■■■■□ 3
IKBKB-210ENST00000518983 AQRO60306 1485 aaKnown RBP eCLIP33.74■■■□□ 2.996e-6■■■■□ 25.1
IKBKB-210ENST00000518983 TDRD9Q8NDG6 1382 aaKnown RBP33.63■■■□□ 2.97
IKBKB-210ENST00000518983 WDR97A6NE52 1622 aa33.57■■■□□ 2.96
IKBKB-210ENST00000518983 CHD1O14646 1710 aa33.53■■■□□ 2.96
IKBKB-210ENST00000518983 FBLN2P98095 1184 aa33.53■■■□□ 2.96
IKBKB-210ENST00000518983 TRIM41Q8WV44 630 aa33.5■■■□□ 2.95
IKBKB-210ENST00000518983 WRNQ14191 1432 aaPredicted RBP eCLIP33.46■■■□□ 2.95
IKBKB-210ENST00000518983 SNAPC4Q5SXM2 1469 aa33.45■■■□□ 2.95
IKBKB-210ENST00000518983 GRIN2BQ13224 1484 aa33.43■■■□□ 2.94
IKBKB-210ENST00000518983 TOP2BQ02880 1626 aa33.42■■■□□ 2.94
IKBKB-210ENST00000518983 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
IKBKB-210ENST00000518983 SYNJ1O43426 1573 aa33.4■■■□□ 2.94
IKBKB-210ENST00000518983 ABCA10Q8WWZ4 1543 aa33.38■■■□□ 2.93
IKBKB-210ENST00000518983 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
IKBKB-210ENST00000518983 PBRM1Q86U86 1689 aa33.37■■■□□ 2.93
IKBKB-210ENST00000518983 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
IKBKB-210ENST00000518983 CHMP7Q8WUX9 453 aaPredicted RBP33.32■■■□□ 2.92
IKBKB-210ENST00000518983 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
IKBKB-210ENST00000518983 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
IKBKB-210ENST00000518983 ABCA5Q8WWZ7 1642 aa33.31■■■□□ 2.92
IKBKB-210ENST00000518983 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
IKBKB-210ENST00000518983 ARHGEF11O15085 1522 aa33.25■■■□□ 2.91
IKBKB-210ENST00000518983 SYNJ2O15056 1496 aa33.24■■■□□ 2.91
IKBKB-210ENST00000518983 CLASP1Q7Z460 1538 aa33.08■■■□□ 2.89
IKBKB-210ENST00000518983 ADAMTS12P58397 1594 aa33.05■■■□□ 2.88
IKBKB-210ENST00000518983 CYB5RLQ6IPT4 315 aa33.01■■■□□ 2.87
IKBKB-210ENST00000518983 ERICH3Q5RHP9 1530 aa33■■■□□ 2.87
IKBKB-210ENST00000518983 GRIN2AQ12879 1464 aa32.99■■■□□ 2.87
IKBKB-210ENST00000518983 FHAD1B1AJZ9 1412 aa32.96■■■□□ 2.87
IKBKB-210ENST00000518983 ARAP1Q96P48 1450 aa32.94■■■□□ 2.86
IKBKB-210ENST00000518983 CEP170Q5SW79 1584 aa32.83■■■□□ 2.85
IKBKB-210ENST00000518983 KIF27Q86VH2 1401 aa32.82■■■□□ 2.84
IKBKB-210ENST00000518983 NUP160Q12769 1436 aa32.8■■■□□ 2.84
IKBKB-210ENST00000518983 CUL7Q14999 1698 aa32.68■■■□□ 2.82
IKBKB-210ENST00000518983 IGF1RP08069 1367 aa32.65■■■□□ 2.82
IKBKB-210ENST00000518983 SHROOM2Q13796 1616 aa32.62■■■□□ 2.81
IKBKB-210ENST00000518983 ERCC6L2Q5T890 1561 aa32.62■■■□□ 2.81
IKBKB-210ENST00000518983 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
IKBKB-210ENST00000518983 TRHP20396 242 aaPredicted RBP32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms