RNA–Protein interactions for RNA: ENST00000598494.5

CRB3-203, Transcript of crumbs 3, cell polarity complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRB3, Length 1,443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3-203ENST00000598494 NISCHQ9Y2I1 1504 aa41.19■■■■■ 4.18
CRB3-203ENST00000598494 CCDC180Q9P1Z9 1646 aa36.32■■■■□ 3.4
CRB3-203ENST00000598494 ABCC9O60706 1549 aa35.16■■■■□ 3.22
CRB3-203ENST00000598494 ZCCHC6Q5VYS8 1495 aaKnown RBP34.45■■■■□ 3.11
CRB3-203ENST00000598494 DCAF1Q9Y4B6 1507 aa34.16■■■■□ 3.06
CRB3-203ENST00000598494 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
CRB3-203ENST00000598494 DCAF8L2P0C7V8 631 aa34.05■■■■□ 3.04
CRB3-203ENST00000598494 NACADO15069 1562 aa34.01■■■■□ 3.04
CRB3-203ENST00000598494 RB1CC1Q8TDY2 1594 aa33.88■■■■□ 3.01
CRB3-203ENST00000598494 SCRIBQ14160 1630 aa33.11■■■□□ 2.89
CRB3-203ENST00000598494 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
CRB3-203ENST00000598494 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
CRB3-203ENST00000598494 BICRAQ9NZM4 1560 aa32.88■■■□□ 2.85
CRB3-203ENST00000598494 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
CRB3-203ENST00000598494 DNAJC5BQ9UF47 199 aa32.16■■■□□ 2.74
CRB3-203ENST00000598494 CECR2Q9BXF3 1484 aa32■■■□□ 2.71
CRB3-203ENST00000598494 EIF4G1Q04637 1599 aaKnown RBP31.99■■■□□ 2.71
CRB3-203ENST00000598494 BAZ1AQ9NRL2 1556 aaPredicted RBP31.86■■■□□ 2.69
CRB3-203ENST00000598494 SMARCA4P51532 1647 aa31.79■■■□□ 2.68
CRB3-203ENST00000598494 CC2D2AQ9P2K1 1620 aa31.79■■■□□ 2.68
CRB3-203ENST00000598494 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
CRB3-203ENST00000598494 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
CRB3-203ENST00000598494 PEG3Q9GZU2 1588 aa31.54■■■□□ 2.64
CRB3-203ENST00000598494 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
CRB3-203ENST00000598494 SMARCA2P51531 1590 aa31.46■■■□□ 2.63
CRB3-203ENST00000598494 NCAPD3P42695 1498 aa31.41■■■□□ 2.62
CRB3-203ENST00000598494 WIZO95785 1651 aa31.4■■■□□ 2.62
CRB3-203ENST00000598494 HMGXB3Q12766 1538 aa31.28■■■□□ 2.6
CRB3-203ENST00000598494 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
CRB3-203ENST00000598494 SUPT5HO00267 1087 aaKnown RBP31.21■■■□□ 2.59
CRB3-203ENST00000598494 TOP2AP11388 1531 aaKnown RBP31.13■■■□□ 2.57
CRB3-203ENST00000598494 CCDC88BA6NC98 1476 aa30.77■■■□□ 2.52
CRB3-203ENST00000598494 NESP48681 1621 aa30.5■■■□□ 2.47
CRB3-203ENST00000598494 CADPSQ9ULU8 1353 aa30.5■■■□□ 2.47
CRB3-203ENST00000598494 CFTRP13569 1480 aa30.46■■■□□ 2.47
CRB3-203ENST00000598494 LAMC3Q9Y6N6 1575 aa30.43■■■□□ 2.46
CRB3-203ENST00000598494 ERCC6Q03468 1493 aa30.26■■■□□ 2.43
CRB3-203ENST00000598494 PDS5BQ9NTI5 1447 aa30.25■■■□□ 2.43
CRB3-203ENST00000598494 PRDM2Q13029 1718 aa30.24■■■□□ 2.43
CRB3-203ENST00000598494 FANCD2Q9BXW9 1451 aa30.11■■■□□ 2.41
CRB3-203ENST00000598494 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
CRB3-203ENST00000598494 CEP164Q9UPV0 1460 aa30■■■□□ 2.39
CRB3-203ENST00000598494 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
CRB3-203ENST00000598494 MRC2Q9UBG0 1479 aa29.9■■■□□ 2.38
CRB3-203ENST00000598494 CUX2O14529 1486 aa29.85■■■□□ 2.37
CRB3-203ENST00000598494 WDR62O43379 1518 aa29.79■■■□□ 2.36
CRB3-203ENST00000598494 URB2Q14146 1524 aaKnown RBP29.79■■■□□ 2.36
CRB3-203ENST00000598494 ABCC8Q09428 1581 aa29.78■■■□□ 2.36
CRB3-203ENST00000598494 WRNQ14191 1432 aaPredicted RBP eCLIP29.77■■■□□ 2.36
CRB3-203ENST00000598494 CUX1P39880 1505 aa29.74■■■□□ 2.35
CRB3-203ENST00000598494 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
CRB3-203ENST00000598494 TOPBP1Q92547 1522 aa29.71■■■□□ 2.35
CRB3-203ENST00000598494 TOP2BQ02880 1626 aa29.65■■■□□ 2.34
CRB3-203ENST00000598494 SYNJ1O43426 1573 aa29.65■■■□□ 2.34
CRB3-203ENST00000598494 BIVM-ERCC5R4GMW8 1640 aa29.64■■■□□ 2.34
CRB3-203ENST00000598494 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
CRB3-203ENST00000598494 POLA1P09884 1462 aaPredicted RBP29.51■■■□□ 2.31
CRB3-203ENST00000598494 FGD5Q6ZNL6 1462 aa29.51■■■□□ 2.31
CRB3-203ENST00000598494 TRIM41Q8WV44 630 aa29.48■■■□□ 2.31
CRB3-203ENST00000598494 SOGA1O94964 1423 aa29.4■■■□□ 2.3
CRB3-203ENST00000598494 IFT140Q96RY7 1462 aa29.37■■■□□ 2.29
CRB3-203ENST00000598494 TARBP1Q13395 1621 aaKnown RBP29.36■■■□□ 2.29
CRB3-203ENST00000598494 RAD54L2Q9Y4B4 1467 aa29.35■■■□□ 2.29
CRB3-203ENST00000598494 ABCA10Q8WWZ4 1543 aa29.29■■■□□ 2.28
CRB3-203ENST00000598494 WDR97A6NE52 1622 aa29.25■■■□□ 2.27
CRB3-203ENST00000598494 ZNF608Q9ULD9 1512 aaPredicted RBP29.23■■■□□ 2.27
CRB3-203ENST00000598494 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
CRB3-203ENST00000598494 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.259e-8■■■■■ 30.5
CRB3-203ENST00000598494 KIF27Q86VH2 1401 aa29.1■■■□□ 2.25
CRB3-203ENST00000598494 ABCA5Q8WWZ7 1642 aa29.1■■■□□ 2.25
CRB3-203ENST00000598494 GAPVD1Q14C86 1478 aa29.07■■■□□ 2.24
CRB3-203ENST00000598494 EIF4G3O43432 1585 aaKnown RBP29.06■■■□□ 2.24
CRB3-203ENST00000598494 RUSC2Q8N2Y8 1516 aa29.03■■■□□ 2.24
CRB3-203ENST00000598494 EEA1Q15075 1411 aa29■■■□□ 2.23
CRB3-203ENST00000598494 GRIN2BQ13224 1484 aa28.97■■■□□ 2.23
CRB3-203ENST00000598494 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
CRB3-203ENST00000598494 IGF1RP08069 1367 aa28.96■■■□□ 2.23
CRB3-203ENST00000598494 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
CRB3-203ENST00000598494 CSRNP3Q8WYN3 585 aa28.86■■■□□ 2.21
CRB3-203ENST00000598494 MAGI1Q96QZ7 1491 aaPredicted RBP28.84■■■□□ 2.21
CRB3-203ENST00000598494 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
CRB3-203ENST00000598494 FAM9AQ8IZU1 332 aaPredicted RBP28.79■■■□□ 2.2
CRB3-203ENST00000598494 CUL7Q14999 1698 aa28.78■■■□□ 2.2
CRB3-203ENST00000598494 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.2
CRB3-203ENST00000598494 DNAJC5Q9H3Z4 198 aa28.76■■■□□ 2.19
CRB3-203ENST00000598494 CARMIL1Q5VZK9 1371 aa28.76■■■□□ 2.19
CRB3-203ENST00000598494 ADAMTS12P58397 1594 aa28.76■■■□□ 2.19
CRB3-203ENST00000598494 OSCARQ8IYS5 282 aa28.75■■■□□ 2.19
CRB3-203ENST00000598494 PRXQ9BXM0 1461 aa28.75■■■□□ 2.19
CRB3-203ENST00000598494 FBLN2P98095 1184 aa28.73■■■□□ 2.19
CRB3-203ENST00000598494 SYNJ2O15056 1496 aa28.72■■■□□ 2.19
CRB3-203ENST00000598494 CHMP7Q8WUX9 453 aaPredicted RBP28.69■■■□□ 2.18
CRB3-203ENST00000598494 RAPGEF2Q9Y4G8 1499 aa28.66■■■□□ 2.18
CRB3-203ENST00000598494 CHD1O14646 1710 aa28.64■■■□□ 2.18
CRB3-203ENST00000598494 KIF21BO75037 1637 aa28.63■■■□□ 2.17
CRB3-203ENST00000598494 GRIN2AQ12879 1464 aa28.6■■■□□ 2.17
CRB3-203ENST00000598494 GOLGA3Q08378 1498 aa28.48■■■□□ 2.15
CRB3-203ENST00000598494 NUP160Q12769 1436 aa28.48■■■□□ 2.15
CRB3-203ENST00000598494 CEP170Q5SW79 1584 aa28.42■■■□□ 2.14
CRB3-203ENST00000598494 CLASP1Q7Z460 1538 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms