RNA–Protein interactions for RNA: ENST00000454510.5

SAFB-202, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SAFB, Length 2,650 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-202ENST00000454510 NISCHQ9Y2I1 1504 aa31.18■■■□□ 2.58
SAFB-202ENST00000454510 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
SAFB-202ENST00000454510 SUPT5HO00267 1087 aaKnown RBP26.38■■□□□ 1.81
SAFB-202ENST00000454510 CCDC180Q9P1Z9 1646 aa26.35■■□□□ 1.81
SAFB-202ENST00000454510 ZCCHC6Q5VYS8 1495 aaKnown RBP26.32■■□□□ 1.8
SAFB-202ENST00000454510 DCAF8L2P0C7V8 631 aa26.32■■□□□ 1.8
SAFB-202ENST00000454510 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
SAFB-202ENST00000454510 DCAF1Q9Y4B6 1507 aa25.41■■□□□ 1.66
SAFB-202ENST00000454510 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
SAFB-202ENST00000454510 HRCP23327 699 aa24.99■■□□□ 1.59
SAFB-202ENST00000454510 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
SAFB-202ENST00000454510 PCGF6Q9BYE7 350 aa24.94■■□□□ 1.58
SAFB-202ENST00000454510 LOC105371045A0A1W2PR82 267 aa24.86■■□□□ 1.57
SAFB-202ENST00000454510 ABCC9O60706 1549 aa24.81■■□□□ 1.56
SAFB-202ENST00000454510 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
SAFB-202ENST00000454510 PPARGC1BQ86YN6 1023 aaKnown RBP24.67■■□□□ 1.54
SAFB-202ENST00000454510 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
SAFB-202ENST00000454510 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
SAFB-202ENST00000454510 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
SAFB-202ENST00000454510 NACADO15069 1562 aa24.46■■□□□ 1.51
SAFB-202ENST00000454510 FAM9AQ8IZU1 332 aaPredicted RBP24.44■■□□□ 1.5
SAFB-202ENST00000454510 EHMT2Q96KQ7 1210 aa24.37■■□□□ 1.49
SAFB-202ENST00000454510 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
SAFB-202ENST00000454510 TRIM26Q12899 539 aaPredicted RBP24.21■■□□□ 1.47
SAFB-202ENST00000454510 WIZO95785 1651 aa24.18■■□□□ 1.46
SAFB-202ENST00000454510 BAZ1AQ9NRL2 1556 aaPredicted RBP23.92■■□□□ 1.42
SAFB-202ENST00000454510 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.412e-11■□□□□ 8.5
SAFB-202ENST00000454510 UNC13AQ9UPW8 1703 aa23.74■■□□□ 1.39
SAFB-202ENST00000454510 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
SAFB-202ENST00000454510 CCDC88BA6NC98 1476 aa23.71■■□□□ 1.39
SAFB-202ENST00000454510 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
SAFB-202ENST00000454510 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
SAFB-202ENST00000454510 ZEB1P37275 1124 aaPredicted RBP23.68■■□□□ 1.38
SAFB-202ENST00000454510 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
SAFB-202ENST00000454510 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
SAFB-202ENST00000454510 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
SAFB-202ENST00000454510 SOGA1O94964 1423 aa23.49■■□□□ 1.35
SAFB-202ENST00000454510 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
SAFB-202ENST00000454510 SCAF1Q9H7N4 1312 aaKnown RBP23.47■■□□□ 1.35
SAFB-202ENST00000454510 PELP1Q8IZL8 1130 aaKnown RBP23.42■■□□□ 1.34
SAFB-202ENST00000454510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.4■■□□□ 1.34
SAFB-202ENST00000454510 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.33
SAFB-202ENST00000454510 UBTFP17480 764 aaKnown RBP23.37■■□□□ 1.33
SAFB-202ENST00000454510 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
SAFB-202ENST00000454510 CCER1Q8TC90 406 aaPredicted RBP23.3■■□□□ 1.32
SAFB-202ENST00000454510 CEP162Q5TB80 1403 aa23.3■■□□□ 1.32
SAFB-202ENST00000454510 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
SAFB-202ENST00000454510 TNIKQ9UKE5 1360 aa23.21■■□□□ 1.31
SAFB-202ENST00000454510 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
SAFB-202ENST00000454510 PEG3Q9GZU2 1588 aa23.16■■□□□ 1.3
SAFB-202ENST00000454510 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
SAFB-202ENST00000454510 EEA1Q15075 1411 aa23.14■■□□□ 1.3
SAFB-202ENST00000454510 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
SAFB-202ENST00000454510 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
SAFB-202ENST00000454510 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
SAFB-202ENST00000454510 NEUROD1Q13562 356 aa22.99■■□□□ 1.27
SAFB-202ENST00000454510 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
SAFB-202ENST00000454510 CEP164Q9UPV0 1460 aa22.94■■□□□ 1.26
SAFB-202ENST00000454510 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
SAFB-202ENST00000454510 CLIP1P30622 1438 aa22.88■■□□□ 1.25
SAFB-202ENST00000454510 RAPGEF2Q9Y4G8 1499 aa22.87■■□□□ 1.25
SAFB-202ENST00000454510 HNRNPUL2Q1KMD3 747 aaKnown RBP22.87■■□□□ 1.25
SAFB-202ENST00000454510 KIF21BO75037 1637 aa22.82■■□□□ 1.24
SAFB-202ENST00000454510 APLP2Q06481 763 aa22.79■■□□□ 1.24
SAFB-202ENST00000454510 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
SAFB-202ENST00000454510 TOP2BQ02880 1626 aa22.74■■□□□ 1.23
SAFB-202ENST00000454510 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
SAFB-202ENST00000454510 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
SAFB-202ENST00000454510 CENPBP07199 599 aaPredicted RBP22.65■■□□□ 1.22
SAFB-202ENST00000454510 ZNF316A6NFI3 1004 aaPredicted RBP22.62■■□□□ 1.21
SAFB-202ENST00000454510 CUX1P39880 1505 aa22.61■■□□□ 1.21
SAFB-202ENST00000454510 HMGXB3Q12766 1538 aa22.61■■□□□ 1.21
SAFB-202ENST00000454510 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
SAFB-202ENST00000454510 YTHDC1Q96MU7 727 aaKnown RBP22.6■■□□□ 1.21
SAFB-202ENST00000454510 PRXQ9BXM0 1461 aa22.55■■□□□ 1.2
SAFB-202ENST00000454510 CFTRP13569 1480 aa22.52■■□□□ 1.2
SAFB-202ENST00000454510 KANK4Q5T7N3 995 aaPredicted RBP22.52■■□□□ 1.2
SAFB-202ENST00000454510 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
SAFB-202ENST00000454510 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
SAFB-202ENST00000454510 ERICH3Q5RHP9 1530 aa22.46■■□□□ 1.19
SAFB-202ENST00000454510 MIER1Q8N108 512 aa22.42■■□□□ 1.18
SAFB-202ENST00000454510 CUX2O14529 1486 aa22.36■■□□□ 1.17
SAFB-202ENST00000454510 MYT1Q01538 1121 aa22.36■■□□□ 1.17
SAFB-202ENST00000454510 ITGAEP38570 1179 aa22.35■■□□□ 1.17
SAFB-202ENST00000454510 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
SAFB-202ENST00000454510 IGF1RP08069 1367 aa22.31■■□□□ 1.16
SAFB-202ENST00000454510 ARHGAP35Q9NRY4 1499 aa22.3■■□□□ 1.16
SAFB-202ENST00000454510 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
SAFB-202ENST00000454510 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
SAFB-202ENST00000454510 CARMIL1Q5VZK9 1371 aa22.23■■□□□ 1.15
SAFB-202ENST00000454510 DHX57Q6P158 1386 aaKnown RBP22.21■■□□□ 1.15
SAFB-202ENST00000454510 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
SAFB-202ENST00000454510 ATP1B4Q9UN42 357 aaPredicted RBP22.21■■□□□ 1.15
SAFB-202ENST00000454510 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
SAFB-202ENST00000454510 CCNB3Q8WWL7 1395 aa22.15■■□□□ 1.14
SAFB-202ENST00000454510 RRBP1Q9P2E9 1410 aaKnown RBP22.14■■□□□ 1.14
SAFB-202ENST00000454510 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
SAFB-202ENST00000454510 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
SAFB-202ENST00000454510 NESP48681 1621 aa22.09■■□□□ 1.13
SAFB-202ENST00000454510 CLSPNQ9HAW4 1339 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms