RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 NISCHQ9Y2I1 1504 aa43.68■■■■■ 4.58
CCDC61-201ENST00000536603 ABCC9O60706 1549 aa39.61■■■■□ 3.93
CCDC61-201ENST00000536603 CCDC180Q9P1Z9 1646 aa39.33■■■■□ 3.89
CCDC61-201ENST00000536603 RB1CC1Q8TDY2 1594 aa37.59■■■■□ 3.61
CCDC61-201ENST00000536603 DNAJC5BQ9UF47 199 aa37.29■■■■□ 3.56
CCDC61-201ENST00000536603 NACADO15069 1562 aa37.23■■■■□ 3.55
CCDC61-201ENST00000536603 DCAF8L2P0C7V8 631 aa37.18■■■■□ 3.54
CCDC61-201ENST00000536603 PABPN1Q86U42 306 aaKnown RBP eCLIP36.86■■■■□ 3.49
CCDC61-201ENST00000536603 UNC13AQ9UPW8 1703 aa36.73■■■■□ 3.47
CCDC61-201ENST00000536603 MYO15BQ96JP2 1530 aa36.56■■■■□ 3.44
CCDC61-201ENST00000536603 BICRAQ9NZM4 1560 aa36.42■■■■□ 3.42
CCDC61-201ENST00000536603 ZCCHC6Q5VYS8 1495 aaKnown RBP36.13■■■■□ 3.37
CCDC61-201ENST00000536603 DCAF1Q9Y4B6 1507 aa36.03■■■■□ 3.36
CCDC61-201ENST00000536603 SHROOM4Q9ULL8 1493 aa35.9■■■■□ 3.34
CCDC61-201ENST00000536603 SCRIBQ14160 1630 aa35.88■■■■□ 3.33
CCDC61-201ENST00000536603 CC2D2AQ9P2K1 1620 aa35.75■■■■□ 3.31
CCDC61-201ENST00000536603 CECR2Q9BXF3 1484 aa35.68■■■■□ 3.3
CCDC61-201ENST00000536603 EIF4G1Q04637 1599 aaKnown RBP35.59■■■■□ 3.29
CCDC61-201ENST00000536603 DNAJC5Q9H3Z4 198 aa34.45■■■■□ 3.11
CCDC61-201ENST00000536603 NCAPD3P42695 1498 aa34.34■■■■□ 3.09
CCDC61-201ENST00000536603 ERCC6Q03468 1493 aa34.27■■■■□ 3.08
CCDC61-201ENST00000536603 ATAD2BQ9ULI0 1458 aa34.21■■■■□ 3.07
CCDC61-201ENST00000536603 CUX2O14529 1486 aa34.19■■■■□ 3.06
CCDC61-201ENST00000536603 SMARCA4P51532 1647 aa34.15■■■■□ 3.06
CCDC61-201ENST00000536603 SMARCA2P51531 1590 aa34.15■■■■□ 3.06
CCDC61-201ENST00000536603 HMGXB3Q12766 1538 aa34.08■■■■□ 3.05
CCDC61-201ENST00000536603 BAZ1AQ9NRL2 1556 aaPredicted RBP33.96■■■■□ 3.03
CCDC61-201ENST00000536603 BAZ1BQ9UIG0 1483 aaKnown RBP33.94■■■■□ 3.02
CCDC61-201ENST00000536603 NESP48681 1621 aa33.93■■■■□ 3.02
CCDC61-201ENST00000536603 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
CCDC61-201ENST00000536603 MROH2BQ7Z745 1585 aa33.67■■■□□ 2.98
CCDC61-201ENST00000536603 LAMC3Q9Y6N6 1575 aa33.66■■■□□ 2.98
CCDC61-201ENST00000536603 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
CCDC61-201ENST00000536603 KIF21AQ7Z4S6 1674 aa33.52■■■□□ 2.96
CCDC61-201ENST00000536603 PDS5BQ9NTI5 1447 aa33.49■■■□□ 2.95
CCDC61-201ENST00000536603 CADPSQ9ULU8 1353 aa33.32■■■□□ 2.92
CCDC61-201ENST00000536603 WIZO95785 1651 aa33.3■■■□□ 2.92
CCDC61-201ENST00000536603 MRC2Q9UBG0 1479 aa33.2■■■□□ 2.91
CCDC61-201ENST00000536603 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
CCDC61-201ENST00000536603 WDR62O43379 1518 aa33.09■■■□□ 2.89
CCDC61-201ENST00000536603 CEP164Q9UPV0 1460 aa33.04■■■□□ 2.88
CCDC61-201ENST00000536603 TRIM41Q8WV44 630 aa32.97■■■□□ 2.87
CCDC61-201ENST00000536603 FANCD2Q9BXW9 1451 aa32.97■■■□□ 2.87
CCDC61-201ENST00000536603 CFTRP13569 1480 aa32.86■■■□□ 2.85
CCDC61-201ENST00000536603 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.85
CCDC61-201ENST00000536603 URB2Q14146 1524 aaKnown RBP32.68■■■□□ 2.82
CCDC61-201ENST00000536603 OSCARQ8IYS5 282 aa32.66■■■□□ 2.82
CCDC61-201ENST00000536603 PRDM2Q13029 1718 aa32.6■■■□□ 2.81
CCDC61-201ENST00000536603 CCDC88BA6NC98 1476 aa32.46■■■□□ 2.79
CCDC61-201ENST00000536603 SUPT5HO00267 1087 aaKnown RBP32.39■■■□□ 2.78
CCDC61-201ENST00000536603 IFT140Q96RY7 1462 aa32.36■■■□□ 2.77
CCDC61-201ENST00000536603 ZNF608Q9ULD9 1512 aaPredicted RBP32.32■■■□□ 2.76
CCDC61-201ENST00000536603 TOPBP1Q92547 1522 aa32.31■■■□□ 2.76
CCDC61-201ENST00000536603 ABCC8Q09428 1581 aa32.24■■■□□ 2.75
CCDC61-201ENST00000536603 RIMBP3CA6NJZ7 1639 aa32.23■■■□□ 2.75
CCDC61-201ENST00000536603 RIMBP3BA6NNM3 1639 aa32.23■■■□□ 2.75
CCDC61-201ENST00000536603 RIMBP3Q9UFD9 1639 aa32.23■■■□□ 2.75
CCDC61-201ENST00000536603 DNMBPQ6XZF7 1577 aa32.17■■■□□ 2.74
CCDC61-201ENST00000536603 EIF4G3O43432 1585 aaKnown RBP32.16■■■□□ 2.74
CCDC61-201ENST00000536603 ARHGEF11O15085 1522 aa32.08■■■□□ 2.73
CCDC61-201ENST00000536603 AQRO60306 1485 aaKnown RBP eCLIP32.03■■■□□ 2.721e-6■■■■■ 30.5
CCDC61-201ENST00000536603 TARBP1Q13395 1621 aaKnown RBP32.02■■■□□ 2.72
CCDC61-201ENST00000536603 CHD1O14646 1710 aa32.01■■■□□ 2.72
CCDC61-201ENST00000536603 FBLN2P98095 1184 aa31.99■■■□□ 2.71
CCDC61-201ENST00000536603 POLA1P09884 1462 aaPredicted RBP31.95■■■□□ 2.7
CCDC61-201ENST00000536603 CYB5RLQ6IPT4 315 aa31.93■■■□□ 2.7
CCDC61-201ENST00000536603 RAD54L2Q9Y4B4 1467 aa31.86■■■□□ 2.69
CCDC61-201ENST00000536603 SOGA1O94964 1423 aa31.84■■■□□ 2.69
CCDC61-201ENST00000536603 TDRD9Q8NDG6 1382 aaKnown RBP31.81■■■□□ 2.68
CCDC61-201ENST00000536603 FGD5Q6ZNL6 1462 aa31.74■■■□□ 2.67
CCDC61-201ENST00000536603 TRHP20396 242 aaPredicted RBP31.74■■■□□ 2.67
CCDC61-201ENST00000536603 ARAP1Q96P48 1450 aa31.73■■■□□ 2.67
CCDC61-201ENST00000536603 SNAPC4Q5SXM2 1469 aa31.7■■■□□ 2.66
CCDC61-201ENST00000536603 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
CCDC61-201ENST00000536603 CHMP7Q8WUX9 453 aaPredicted RBP31.67■■■□□ 2.66
CCDC61-201ENST00000536603 CUX1P39880 1505 aa31.65■■■□□ 2.66
CCDC61-201ENST00000536603 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
CCDC61-201ENST00000536603 SYNJ1O43426 1573 aa31.58■■■□□ 2.65
CCDC61-201ENST00000536603 GRIN2BQ13224 1484 aa31.58■■■□□ 2.65
CCDC61-201ENST00000536603 CLASP1Q7Z460 1538 aa31.54■■■□□ 2.64
CCDC61-201ENST00000536603 SYNJ2O15056 1496 aa31.49■■■□□ 2.63
CCDC61-201ENST00000536603 PBRM1Q86U86 1689 aa31.48■■■□□ 2.63
CCDC61-201ENST00000536603 GAPVD1Q14C86 1478 aa31.45■■■□□ 2.62
CCDC61-201ENST00000536603 ABCA10Q8WWZ4 1543 aa31.33■■■□□ 2.61
CCDC61-201ENST00000536603 ABCA5Q8WWZ7 1642 aa31.31■■■□□ 2.6
CCDC61-201ENST00000536603 WRNQ14191 1432 aaPredicted RBP eCLIP31.21■■■□□ 2.59
CCDC61-201ENST00000536603 GRIN2AQ12879 1464 aa31.16■■■□□ 2.58
CCDC61-201ENST00000536603 ADAMTS12P58397 1594 aa31.11■■■□□ 2.57
CCDC61-201ENST00000536603 TOP2BQ02880 1626 aa31.09■■■□□ 2.57
CCDC61-201ENST00000536603 BIVM-ERCC5R4GMW8 1640 aa31.09■■■□□ 2.57
CCDC61-201ENST00000536603 CEP170Q5SW79 1584 aa31.06■■■□□ 2.56
CCDC61-201ENST00000536603 ERCC6L2Q5T890 1561 aa31.06■■■□□ 2.56
CCDC61-201ENST00000536603 FHAD1B1AJZ9 1412 aa31.02■■■□□ 2.56
CCDC61-201ENST00000536603 NUP160Q12769 1436 aa31.02■■■□□ 2.56
CCDC61-201ENST00000536603 AEBP2Q6ZN18 517 aaPredicted RBP31■■■□□ 2.55
CCDC61-201ENST00000536603 ERICH3Q5RHP9 1530 aa30.95■■■□□ 2.55
CCDC61-201ENST00000536603 SHROOM2Q13796 1616 aa30.93■■■□□ 2.54
CCDC61-201ENST00000536603 PRG4Q92954 1404 aaPredicted RBP30.82■■■□□ 2.52
CCDC61-201ENST00000536603 JPH4Q96JJ6 628 aa30.78■■■□□ 2.52
CCDC61-201ENST00000536603 KIF13AQ9H1H9 1805 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 294.1 ms