RNA–Protein interactions for RNA: ENST00000615793.1

UBE2D1-204, Transcript of ubiquitin conjugating enzyme E2 D1, humanhuman

TSL 2 BASIC

Gene UBE2D1, Length 2,621 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D1-204ENST00000615793 NISCHQ9Y2I1 1504 aa34.76■■■■□ 3.15
UBE2D1-204ENST00000615793 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
UBE2D1-204ENST00000615793 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
UBE2D1-204ENST00000615793 SHROOM4Q9ULL8 1493 aa29.05■■■□□ 2.24
UBE2D1-204ENST00000615793 DCAF8L2P0C7V8 631 aa29.01■■■□□ 2.23
UBE2D1-204ENST00000615793 DCAF1Q9Y4B6 1507 aa28.54■■■□□ 2.16
UBE2D1-204ENST00000615793 ABCC9O60706 1549 aa28.31■■■□□ 2.12
UBE2D1-204ENST00000615793 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
UBE2D1-204ENST00000615793 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
UBE2D1-204ENST00000615793 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
UBE2D1-204ENST00000615793 NACADO15069 1562 aa27.84■■■□□ 2.05
UBE2D1-204ENST00000615793 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
UBE2D1-204ENST00000615793 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.94
UBE2D1-204ENST00000615793 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.93
UBE2D1-204ENST00000615793 UNC13AQ9UPW8 1703 aa27.11■■□□□ 1.93
UBE2D1-204ENST00000615793 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
UBE2D1-204ENST00000615793 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
UBE2D1-204ENST00000615793 PABPN1Q86U42 306 aaKnown RBP eCLIP26.91■■□□□ 1.9
UBE2D1-204ENST00000615793 WIZO95785 1651 aa26.79■■□□□ 1.88
UBE2D1-204ENST00000615793 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
UBE2D1-204ENST00000615793 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.87
UBE2D1-204ENST00000615793 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
UBE2D1-204ENST00000615793 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
UBE2D1-204ENST00000615793 TRIM41Q8WV44 630 aa26.3■■□□□ 1.8
UBE2D1-204ENST00000615793 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
UBE2D1-204ENST00000615793 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
UBE2D1-204ENST00000615793 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
UBE2D1-204ENST00000615793 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
UBE2D1-204ENST00000615793 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
UBE2D1-204ENST00000615793 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
UBE2D1-204ENST00000615793 FAM9AQ8IZU1 332 aaPredicted RBP26.03■■□□□ 1.76
UBE2D1-204ENST00000615793 BAZ1BQ9UIG0 1483 aaKnown RBP26.01■■□□□ 1.75
UBE2D1-204ENST00000615793 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
UBE2D1-204ENST00000615793 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
UBE2D1-204ENST00000615793 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
UBE2D1-204ENST00000615793 HMGXB3Q12766 1538 aa25.69■■□□□ 1.7
UBE2D1-204ENST00000615793 WRNQ14191 1432 aaPredicted RBP eCLIP25.59■■□□□ 1.69
UBE2D1-204ENST00000615793 SOGA1O94964 1423 aa25.52■■□□□ 1.68
UBE2D1-204ENST00000615793 CC2D2AQ9P2K1 1620 aa25.51■■□□□ 1.67
UBE2D1-204ENST00000615793 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
UBE2D1-204ENST00000615793 RUSC2Q8N2Y8 1516 aa25.43■■□□□ 1.66
UBE2D1-204ENST00000615793 PCGF6Q9BYE7 350 aa25.4■■□□□ 1.66
UBE2D1-204ENST00000615793 CFTRP13569 1480 aa25.33■■□□□ 1.65
UBE2D1-204ENST00000615793 CSRNP3Q8WYN3 585 aa25.33■■□□□ 1.64
UBE2D1-204ENST00000615793 EEA1Q15075 1411 aa25.28■■□□□ 1.64
UBE2D1-204ENST00000615793 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
UBE2D1-204ENST00000615793 CADPSQ9ULU8 1353 aa25.2■■□□□ 1.62
UBE2D1-204ENST00000615793 BIVM-ERCC5R4GMW8 1640 aa25.18■■□□□ 1.62
UBE2D1-204ENST00000615793 UBTFP17480 764 aaKnown RBP25.16■■□□□ 1.62
UBE2D1-204ENST00000615793 CUX1P39880 1505 aa25.16■■□□□ 1.62
UBE2D1-204ENST00000615793 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
UBE2D1-204ENST00000615793 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
UBE2D1-204ENST00000615793 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
UBE2D1-204ENST00000615793 TNIKQ9UKE5 1360 aa25.07■■□□□ 1.6
UBE2D1-204ENST00000615793 CEP162Q5TB80 1403 aa25.05■■□□□ 1.6
UBE2D1-204ENST00000615793 PPARGC1BQ86YN6 1023 aaKnown RBP25.04■■□□□ 1.6
UBE2D1-204ENST00000615793 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
UBE2D1-204ENST00000615793 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.6
UBE2D1-204ENST00000615793 NESP48681 1621 aa25■■□□□ 1.59
UBE2D1-204ENST00000615793 KIF21BO75037 1637 aa24.98■■□□□ 1.59
UBE2D1-204ENST00000615793 FANCD2Q9BXW9 1451 aa24.95■■□□□ 1.58
UBE2D1-204ENST00000615793 RAPGEF2Q9Y4G8 1499 aa24.94■■□□□ 1.58
UBE2D1-204ENST00000615793 KIF27Q86VH2 1401 aa24.87■■□□□ 1.57
UBE2D1-204ENST00000615793 HRCP23327 699 aa24.86■■□□□ 1.57
UBE2D1-204ENST00000615793 RANGAP1P46060 587 aaPredicted RBP24.84■■□□□ 1.57
UBE2D1-204ENST00000615793 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
UBE2D1-204ENST00000615793 CUX2O14529 1486 aa24.79■■□□□ 1.56
UBE2D1-204ENST00000615793 TTBK1Q5TCY1 1321 aaPredicted RBP24.79■■□□□ 1.56
UBE2D1-204ENST00000615793 PRXQ9BXM0 1461 aa24.78■■□□□ 1.56
UBE2D1-204ENST00000615793 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
UBE2D1-204ENST00000615793 CLIP1P30622 1438 aa24.76■■□□□ 1.55
UBE2D1-204ENST00000615793 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
UBE2D1-204ENST00000615793 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
UBE2D1-204ENST00000615793 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
UBE2D1-204ENST00000615793 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
UBE2D1-204ENST00000615793 IGF1RP08069 1367 aa24.66■■□□□ 1.54
UBE2D1-204ENST00000615793 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
UBE2D1-204ENST00000615793 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.54
UBE2D1-204ENST00000615793 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
UBE2D1-204ENST00000615793 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
UBE2D1-204ENST00000615793 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
UBE2D1-204ENST00000615793 VPS8Q8N3P4 1428 aa24.55■■□□□ 1.52
UBE2D1-204ENST00000615793 ABCA10Q8WWZ4 1543 aa24.53■■□□□ 1.52
UBE2D1-204ENST00000615793 APLP2Q06481 763 aa24.44■■□□□ 1.5
UBE2D1-204ENST00000615793 ARAP1Q96P48 1450 aa24.44■■□□□ 1.5
UBE2D1-204ENST00000615793 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
UBE2D1-204ENST00000615793 WDR97A6NE52 1622 aa24.38■■□□□ 1.49
UBE2D1-204ENST00000615793 ARHGAP35Q9NRY4 1499 aa24.36■■□□□ 1.49
UBE2D1-204ENST00000615793 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
UBE2D1-204ENST00000615793 MRC2Q9UBG0 1479 aa24.3■■□□□ 1.48
UBE2D1-204ENST00000615793 ABCA5Q8WWZ7 1642 aa24.29■■□□□ 1.48
UBE2D1-204ENST00000615793 CUL7Q14999 1698 aa24.28■■□□□ 1.48
UBE2D1-204ENST00000615793 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
UBE2D1-204ENST00000615793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.26■■□□□ 1.47
UBE2D1-204ENST00000615793 P3H3Q8IVL6 736 aa24.24■■□□□ 1.47
UBE2D1-204ENST00000615793 ZEB1P37275 1124 aaPredicted RBP24.21■■□□□ 1.47
UBE2D1-204ENST00000615793 KANK4Q5T7N3 995 aaPredicted RBP24.21■■□□□ 1.47
UBE2D1-204ENST00000615793 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.46
UBE2D1-204ENST00000615793 ERCC6Q03468 1493 aa24.18■■□□□ 1.46
UBE2D1-204ENST00000615793 CCER1Q8TC90 406 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms