Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 AGAP7P-201ENST00000582299 2062 ntBASIC14.13□□□□□ -0.15
HLA-DQB1P01920 AGAP14-201ENST00000624701 2060 ntBASIC14.13□□□□□ -0.15
HLA-DQB1P01920 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.13□□□□□ -0.15
HLA-DQB1P01920 CICP14-201ENST00000629111 2732 ntBASIC14.13□□□□□ -0.15
HLA-DQB1P01920 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 AP003680.1-201ENST00000598970 3660 ntBASIC14.12□□□□□ -0.15
HLA-DQB1P01920 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 AL592424.1-201ENST00000563624 1536 ntBASIC14.12□□□□□ -0.15
HLA-DQB1P01920 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 AC005840.4-201ENST00000541242 2494 ntBASIC14.12□□□□□ -0.15
HLA-DQB1P01920 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 DUX4L26-201ENST00000489078 1255 ntBASIC14.12□□□□□ -0.15
HLA-DQB1P01920 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.12□□□□□ -0.15
HLA-DQB1P01920 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 SIGLEC16-201ENST00000599858 1437 ntBASIC14.12□□□□□ -0.15
HLA-DQB1P01920 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DQB1P01920 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 AC105250.1-201ENST00000509378 2057 ntBASIC14.11□□□□□ -0.15
HLA-DQB1P01920 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms