Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GAPDHP04406 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.75□□□□□ -0.21
GAPDHP04406 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
GAPDHP04406 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
GAPDHP04406 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GAPDHP04406 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
GAPDHP04406 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
GAPDHP04406 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GAPDHP04406 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 TOP3BP1-201ENST00000420768 1380 ntBASIC13.74□□□□□ -0.21
GAPDHP04406 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.74□□□□□ -0.21
GAPDHP04406 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
GAPDHP04406 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GAPDHP04406 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GAPDHP04406 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GAPDHP04406 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 MRPL3P1-201ENST00000400109 1033 ntBASIC13.74□□□□□ -0.21
GAPDHP04406 MRPL20P1-201ENST00000400819 433 ntBASIC13.74□□□□□ -0.21
GAPDHP04406 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GAPDHP04406 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
GAPDHP04406 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
GAPDHP04406 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.74□□□□□ -0.21
GAPDHP04406 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.74□□□□□ -0.21
GAPDHP04406 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.74□□□□□ -0.21
GAPDHP04406 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GAPDHP04406 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GAPDHP04406 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GAPDHP04406 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GAPDHP04406 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.73□□□□□ -0.21
GAPDHP04406 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
GAPDHP04406 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.73□□□□□ -0.21
GAPDHP04406 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GAPDHP04406 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.73□□□□□ -0.21
GAPDHP04406 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.73□□□□□ -0.21
GAPDHP04406 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
GAPDHP04406 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.73□□□□□ -0.21
GAPDHP04406 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GAPDHP04406 AC129492.6-201ENST00000611383 1305 ntBASIC13.73□□□□□ -0.21
GAPDHP04406 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.73□□□□□ -0.21
GAPDHP04406 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.73□□□□□ -0.21
GAPDHP04406 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.73□□□□□ -0.21
GAPDHP04406 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GAPDHP04406 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.73□□□□□ -0.21
GAPDHP04406 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.73□□□□□ -0.21
GAPDHP04406 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.73□□□□□ -0.21
GAPDHP04406 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms