RNA–Protein interactions for RNA: ENST00000359125.6

KCNQ2-204, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KCNQ2, Length 3,253 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-204ENST00000359125 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
KCNQ2-204ENST00000359125 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
KCNQ2-204ENST00000359125 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
KCNQ2-204ENST00000359125 HRCP23327 699 aa26.18■■□□□ 1.78
KCNQ2-204ENST00000359125 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
KCNQ2-204ENST00000359125 PPARGC1BQ86YN6 1023 aaKnown RBP26.01■■□□□ 1.75
KCNQ2-204ENST00000359125 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
KCNQ2-204ENST00000359125 MYO15BQ96JP2 1530 aa25.67■■□□□ 1.7
KCNQ2-204ENST00000359125 DCAF8L2P0C7V8 631 aa25.59■■□□□ 1.69
KCNQ2-204ENST00000359125 LOC105371045A0A1W2PR82 267 aa25.39■■□□□ 1.66
KCNQ2-204ENST00000359125 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
KCNQ2-204ENST00000359125 EHMT2Q96KQ7 1210 aa24.9■■□□□ 1.58
KCNQ2-204ENST00000359125 ZCCHC6Q5VYS8 1495 aaKnown RBP24.87■■□□□ 1.57
KCNQ2-204ENST00000359125 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
KCNQ2-204ENST00000359125 PELP1Q8IZL8 1130 aaKnown RBP24.81■■□□□ 1.56
KCNQ2-204ENST00000359125 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
KCNQ2-204ENST00000359125 FAM9AQ8IZU1 332 aaPredicted RBP24.73■■□□□ 1.55
KCNQ2-204ENST00000359125 ZEB1P37275 1124 aaPredicted RBP24.62■■□□□ 1.53
KCNQ2-204ENST00000359125 TRIM41Q8WV44 630 aa24.42■■□□□ 1.5
KCNQ2-204ENST00000359125 CCDC180Q9P1Z9 1646 aa24.41■■□□□ 1.5
KCNQ2-204ENST00000359125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
KCNQ2-204ENST00000359125 NEUROD1Q13562 356 aa24.24■■□□□ 1.47
KCNQ2-204ENST00000359125 TTBK1Q5TCY1 1321 aaPredicted RBP24.21■■□□□ 1.47
KCNQ2-204ENST00000359125 CCER1Q8TC90 406 aaPredicted RBP24.2■■□□□ 1.46
KCNQ2-204ENST00000359125 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
KCNQ2-204ENST00000359125 GTF3C3Q9Y5Q9 886 aa24.16■■□□□ 1.46
KCNQ2-204ENST00000359125 DIEXFQ68CQ4 756 aaKnown RBP24■■□□□ 1.43
KCNQ2-204ENST00000359125 CENPBP07199 599 aaPredicted RBP23.99■■□□□ 1.43
KCNQ2-204ENST00000359125 YTHDC1Q96MU7 727 aaKnown RBP23.95■■□□□ 1.42
KCNQ2-204ENST00000359125 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
KCNQ2-204ENST00000359125 MYT1Q01538 1121 aa23.69■■□□□ 1.38
KCNQ2-204ENST00000359125 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
KCNQ2-204ENST00000359125 ABCC9O60706 1549 aa23.55■■□□□ 1.36
KCNQ2-204ENST00000359125 SCRIBQ14160 1630 aa23.52■■□□□ 1.36
KCNQ2-204ENST00000359125 ZNF316A6NFI3 1004 aaPredicted RBP23.47■■□□□ 1.35
KCNQ2-204ENST00000359125 MIER1Q8N108 512 aa23.42■■□□□ 1.34
KCNQ2-204ENST00000359125 HNRNPUL2Q1KMD3 747 aaKnown RBP23.37■■□□□ 1.33
KCNQ2-204ENST00000359125 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
KCNQ2-204ENST00000359125 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
KCNQ2-204ENST00000359125 RANGAP1P46060 587 aaPredicted RBP23.18■■□□□ 1.3
KCNQ2-204ENST00000359125 CEP162Q5TB80 1403 aa23.1■■□□□ 1.29
KCNQ2-204ENST00000359125 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.28
KCNQ2-204ENST00000359125 WIZO95785 1651 aa22.97■■□□□ 1.27
KCNQ2-204ENST00000359125 SOGA1O94964 1423 aa22.96■■□□□ 1.27
KCNQ2-204ENST00000359125 CCDC88BA6NC98 1476 aa22.96■■□□□ 1.27
KCNQ2-204ENST00000359125 CSRNP3Q8WYN3 585 aa22.96■■□□□ 1.27
KCNQ2-204ENST00000359125 ABCC8Q09428 1581 aa22.95■■□□□ 1.26
KCNQ2-204ENST00000359125 APLP2Q06481 763 aa22.92■■□□□ 1.26
KCNQ2-204ENST00000359125 SUPT16HQ9Y5B9 1047 aaKnown RBP22.89■■□□□ 1.25
KCNQ2-204ENST00000359125 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
KCNQ2-204ENST00000359125 BCANQ96GW7 911 aa22.85■■□□□ 1.25
KCNQ2-204ENST00000359125 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
KCNQ2-204ENST00000359125 RUSC2Q8N2Y8 1516 aa22.82■■□□□ 1.24
KCNQ2-204ENST00000359125 TSHZ2Q9NRE2 1034 aa22.72■■□□□ 1.23
KCNQ2-204ENST00000359125 ANP32EQ9BTT0 268 aa22.65■■□□□ 1.22
KCNQ2-204ENST00000359125 ITGAEP38570 1179 aa22.65■■□□□ 1.22
KCNQ2-204ENST00000359125 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
KCNQ2-204ENST00000359125 GOLGA3Q08378 1498 aa22.58■■□□□ 1.2
KCNQ2-204ENST00000359125 CLIP1P30622 1438 aa22.56■■□□□ 1.2
KCNQ2-204ENST00000359125 BCL11AQ9H165 835 aa22.55■■□□□ 1.2
KCNQ2-204ENST00000359125 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
KCNQ2-204ENST00000359125 FKBP8Q14318 412 aa22.53■■□□□ 1.2
KCNQ2-204ENST00000359125 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
KCNQ2-204ENST00000359125 CLSPNQ9HAW4 1339 aa22.47■■□□□ 1.19
KCNQ2-204ENST00000359125 EEA1Q15075 1411 aa22.45■■□□□ 1.18
KCNQ2-204ENST00000359125 DHX57Q6P158 1386 aaKnown RBP22.39■■□□□ 1.18
KCNQ2-204ENST00000359125 DDX10Q13206 875 aaKnown RBP22.38■■□□□ 1.17
KCNQ2-204ENST00000359125 VPS8Q8N3P4 1428 aa22.37■■□□□ 1.17
KCNQ2-204ENST00000359125 NACADO15069 1562 aa22.37■■□□□ 1.17
KCNQ2-204ENST00000359125 KANK4Q5T7N3 995 aaPredicted RBP22.35■■□□□ 1.17
KCNQ2-204ENST00000359125 HIRIP3Q9BW71 556 aaPredicted RBP22.35■■□□□ 1.17
KCNQ2-204ENST00000359125 NEFLP07196 543 aa22.35■■□□□ 1.17
KCNQ2-204ENST00000359125 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
KCNQ2-204ENST00000359125 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
KCNQ2-204ENST00000359125 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
KCNQ2-204ENST00000359125 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
KCNQ2-204ENST00000359125 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.16
KCNQ2-204ENST00000359125 RBM19Q9Y4C8 960 aaKnown RBP22.27■■□□□ 1.16
KCNQ2-204ENST00000359125 RAPGEF2Q9Y4G8 1499 aa22.26■■□□□ 1.15
KCNQ2-204ENST00000359125 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
KCNQ2-204ENST00000359125 SMARCA4P51532 1647 aa22.15■■□□□ 1.14
KCNQ2-204ENST00000359125 IRX6P78412 446 aaPredicted RBP22.15■■□□□ 1.14
KCNQ2-204ENST00000359125 ERICH6Q7L0X2 663 aa22.12■■□□□ 1.13
KCNQ2-204ENST00000359125 KIF21BO75037 1637 aa22.11■■□□□ 1.13
KCNQ2-204ENST00000359125 ATP1B4Q9UN42 357 aaPredicted RBP22.09■■□□□ 1.13
KCNQ2-204ENST00000359125 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
KCNQ2-204ENST00000359125 FAM50AQ14320 339 aaKnown RBP22.06■■□□□ 1.12
KCNQ2-204ENST00000359125 ANP32CO43423 234 aa22.04■■□□□ 1.12
KCNQ2-204ENST00000359125 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
KCNQ2-204ENST00000359125 MSH5O43196 834 aa21.99■■□□□ 1.11
KCNQ2-204ENST00000359125 RAB3GAP2Q9H2M9 1393 aa21.98■■□□□ 1.11
KCNQ2-204ENST00000359125 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
KCNQ2-204ENST00000359125 HNRNPUQ00839 825 aaKnown RBP eCLIP21.91■■□□□ 1.1
KCNQ2-204ENST00000359125 CDK11AQ9UQ88 783 aaPredicted RBP21.9■■□□□ 1.1
KCNQ2-204ENST00000359125 P3H3Q8IVL6 736 aa21.88■■□□□ 1.09
KCNQ2-204ENST00000359125 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
KCNQ2-204ENST00000359125 PPP1R15AO75807 674 aaPredicted RBP21.87■■□□□ 1.09
KCNQ2-204ENST00000359125 RRBP1Q9P2E9 1410 aaKnown RBP21.83■■□□□ 1.08
KCNQ2-204ENST00000359125 WDR97A6NE52 1622 aa21.81■■□□□ 1.08
KCNQ2-204ENST00000359125 CNGB1Q14028 1251 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms